RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.67□□□□□ -1.18
SMG1-201ENST00000330588 AS3MTQ9HBK9 375 aa7.67□□□□□ -1.18
SMG1-201ENST00000330588 CYLDQ9NQC7 956 aa7.67□□□□□ -1.18
SMG1-201ENST00000330588 AATFQ9NY61 560 aaKnown RBP eCLIP7.67□□□□□ -1.18
SMG1-201ENST00000330588 MYH1P12882 1939 aa7.66□□□□□ -1.18
SMG1-201ENST00000330588 IDH1O75874 414 aaKnown RBP7.66□□□□□ -1.18
SMG1-201ENST00000330588 ASNSP08243 561 aa7.66□□□□□ -1.18
SMG1-201ENST00000330588 CAPN2P17655 700 aa7.66□□□□□ -1.18
SMG1-201ENST00000330588 GPC1P35052 558 aa7.66□□□□□ -1.18
SMG1-201ENST00000330588 RRP1P56182 461 aaKnown RBP7.66□□□□□ -1.18
SMG1-201ENST00000330588 SRSF11Q05519 484 aaKnown RBP7.66□□□□□ -1.18
SMG1-201ENST00000330588 PABPC4Q13310 644 aaKnown RBP eCLIP7.66□□□□□ -1.18
SMG1-201ENST00000330588 KIF22Q14807 665 aa7.66□□□□□ -1.18
SMG1-201ENST00000330588 C20orf194Q5TEA3 1177 aa7.66□□□□□ -1.18
SMG1-201ENST00000330588 C17orf99Q6UX52 265 aa7.66□□□□□ -1.18
SMG1-201ENST00000330588 ADGRA1Q86SQ6 560 aa7.66□□□□□ -1.18
SMG1-201ENST00000330588 TICAM2Q86XR7 235 aa7.66□□□□□ -1.18
SMG1-201ENST00000330588 ARMC5Q96C12 935 aa7.66□□□□□ -1.18
SMG1-201ENST00000330588 HAUS7Q99871 368 aa7.66□□□□□ -1.18
SMG1-201ENST00000330588 RIOK1Q9BRS2 568 aaKnown RBP7.66□□□□□ -1.18
SMG1-201ENST00000330588 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.66□□□□□ -1.18
SMG1-201ENST00000330588 AGTPBP1Q9UPW5 1226 aa7.66□□□□□ -1.18
SMG1-201ENST00000330588 PTPN22Q9Y2R2 807 aa7.66□□□□□ -1.18
SMG1-201ENST00000330588 ZHX2Q9Y6X8 837 aa7.66□□□□□ -1.18
SMG1-201ENST00000330588 MYH7P12883 1935 aa7.66□□□□□ -1.18
SMG1-201ENST00000330588 NAV1Q8NEY1 1877 aa7.65□□□□□ -1.18
SMG1-201ENST00000330588 TCRBV5S4A2TA0A5A2 114 aa7.65□□□□□ -1.18
SMG1-201ENST00000330588 CCDC85CA6NKD9 419 aa7.65□□□□□ -1.18
SMG1-201ENST00000330588 USP17L5A8MUK1 530 aa7.65□□□□□ -1.18
SMG1-201ENST00000330588 C19orf81C9J6K1 198 aa7.65□□□□□ -1.18
SMG1-201ENST00000330588 PDHXO00330 501 aa7.65□□□□□ -1.18
SMG1-201ENST00000330588 PDE6AP16499 860 aa7.65□□□□□ -1.18
SMG1-201ENST00000330588 LACTBP83111 547 aaPredicted RBP7.65□□□□□ -1.18
SMG1-201ENST00000330588 UBE3CQ15386 1083 aa7.65□□□□□ -1.18
SMG1-201ENST00000330588 ZSCAN25Q6NSZ9 544 aa7.65□□□□□ -1.18
SMG1-201ENST00000330588 GPAT2Q6NUI2 795 aa7.65□□□□□ -1.18
SMG1-201ENST00000330588 TTC6Q86TZ1 520 aa7.65□□□□□ -1.18
SMG1-201ENST00000330588 MAGEB6Q8N7X4 407 aa7.65□□□□□ -1.18
SMG1-201ENST00000330588 ZNF280CQ8ND82 737 aa7.65□□□□□ -1.18
SMG1-201ENST00000330588 TGFBRAP1Q8WUH2 860 aa7.65□□□□□ -1.18
SMG1-201ENST00000330588 GPATCH3Q96I76 525 aa7.65□□□□□ -1.18
SMG1-201ENST00000330588 GMCL1Q96IK5 515 aa7.65□□□□□ -1.18
SMG1-201ENST00000330588 CRNKL1Q9BZJ0 848 aaKnown RBP7.65□□□□□ -1.18
SMG1-201ENST00000330588 EFCC1Q9HA90 598 aa7.65□□□□□ -1.18
SMG1-201ENST00000330588 IL1RAPL2Q9NP60 686 aa7.65□□□□□ -1.18
SMG1-201ENST00000330588 TRIM17Q9Y577 477 aa7.65□□□□□ -1.18
SMG1-201ENST00000330588 FBXO45P0C2W1 286 aa7.64□□□□□ -1.19
SMG1-201ENST00000330588 BCRP11274 1271 aa7.64□□□□□ -1.19
SMG1-201ENST00000330588 HOXD10P28358 340 aa7.64□□□□□ -1.19
SMG1-201ENST00000330588 ERVK-9P63128 1117 aa7.64□□□□□ -1.19
SMG1-201ENST00000330588 SLC9C2Q5TAH2 1124 aa7.64□□□□□ -1.19
SMG1-201ENST00000330588 TATDN1Q6P1N9 297 aa7.64□□□□□ -1.19
SMG1-201ENST00000330588 LYPD4Q6UWN0 246 aa7.64□□□□□ -1.19
SMG1-201ENST00000330588 CD99L2Q8TCZ2 262 aa7.64□□□□□ -1.19
SMG1-201ENST00000330588 GTF3C2Q8WUA4 911 aaPredicted RBP7.64□□□□□ -1.19
SMG1-201ENST00000330588 ANTXR1Q9H6X2 564 aa7.64□□□□□ -1.19
SMG1-201ENST00000330588 DNAJC18Q9H819 358 aa7.64□□□□□ -1.19
SMG1-201ENST00000330588 PRM3Q9NNZ6 103 aa7.64□□□□□ -1.19
SMG1-201ENST00000330588 PAG1Q9NWQ8 432 aa7.64□□□□□ -1.19
SMG1-201ENST00000330588 SERPINB13Q9UIV8 391 aa7.64□□□□□ -1.19
SMG1-201ENST00000330588 TTC41PQ6P2S7 1318 aa7.64□□□□□ -1.19
SMG1-201ENST00000330588 HOXA7P31268 230 aaPredicted RBP7.63□□□□□ -1.19
SMG1-201ENST00000330588 ADD2P35612 726 aa7.63□□□□□ -1.19
SMG1-201ENST00000330588 USP5P45974 858 aa7.63□□□□□ -1.19
SMG1-201ENST00000330588 GCLCP48506 637 aaPredicted RBP7.63□□□□□ -1.19
SMG1-201ENST00000330588 MLLT1Q03111 559 aaPredicted RBP7.63□□□□□ -1.19
SMG1-201ENST00000330588 GABPAQ06546 454 aa7.63□□□□□ -1.19
SMG1-201ENST00000330588 LRRFIP1Q32MZ4 808 aaKnown RBP7.63□□□□□ -1.19
SMG1-201ENST00000330588 PRICKLE2Q7Z3G6 844 aa7.63□□□□□ -1.19
SMG1-201ENST00000330588 TRIM22Q8IYM9 498 aa7.63□□□□□ -1.19
SMG1-201ENST00000330588 CRACR2BQ8N4Y2 399 aaPredicted RBP7.63□□□□□ -1.19
SMG1-201ENST00000330588 ADAMTS19Q8TE59 1207 aa7.63□□□□□ -1.19
SMG1-201ENST00000330588 UBE2Q2Q8WVN8 375 aa7.63□□□□□ -1.19
SMG1-201ENST00000330588 C12orf42Q96LP6 360 aa7.63□□□□□ -1.19
SMG1-201ENST00000330588 ATP8A2Q9NTI2 1148 aa7.63□□□□□ -1.19
SMG1-201ENST00000330588 ECHDC1Q9NTX5 307 aa7.63□□□□□ -1.19
SMG1-201ENST00000330588 MGAMO43451 1857 aa7.63□□□□□ -1.19
SMG1-201ENST00000330588 ZNF532Q9HCE3 1301 aa7.63□□□□□ -1.19
SMG1-201ENST00000330588 GOLIM4O00461 696 aa7.63□□□□□ -1.19
SMG1-201ENST00000330588 ZFYP08048 801 aaPredicted RBP7.63□□□□□ -1.19
SMG1-201ENST00000330588 BACE1P56817 501 aa7.63□□□□□ -1.19
SMG1-201ENST00000330588 DYNLL1P63167 89 aaKnown RBP7.63□□□□□ -1.19
SMG1-201ENST00000330588 HDAC1Q13547 482 aaPredicted RBP7.63□□□□□ -1.19
SMG1-201ENST00000330588 FAM110CQ1W6H9 321 aa7.63□□□□□ -1.19
SMG1-201ENST00000330588 GIMAP6Q6P9H5 292 aa7.63□□□□□ -1.19
SMG1-201ENST00000330588 NBPF11Q86T75 865 aa7.63□□□□□ -1.19
SMG1-201ENST00000330588 MAPKAPK5Q8IW41 473 aa7.63□□□□□ -1.19
SMG1-201ENST00000330588 GCC1Q96CN9 775 aa7.63□□□□□ -1.19
SMG1-201ENST00000330588 ZNF837Q96EG3 531 aaPredicted RBP7.63□□□□□ -1.19
SMG1-201ENST00000330588 SWAP70Q9UH65 585 aa7.63□□□□□ -1.19
SMG1-201ENST00000330588 PALD1Q9ULE6 856 aa7.63□□□□□ -1.19
SMG1-201ENST00000330588 PCDHB9Q9Y5E1 797 aa7.63□□□□□ -1.19
SMG1-201ENST00000330588 DNMT3AQ9Y6K1 912 aaPredicted RBP7.63□□□□□ -1.19
SMG1-201ENST00000330588 USP17L10C9JJH3 530 aa7.62□□□□□ -1.19
SMG1-201ENST00000330588 ERC2O15083 957 aa7.62□□□□□ -1.19
SMG1-201ENST00000330588 CELA2BP08218 269 aaPredicted RBP7.62□□□□□ -1.19
SMG1-201ENST00000330588 RHOQP17081 205 aa7.62□□□□□ -1.19
SMG1-201ENST00000330588 USP14P54578 494 aa7.62□□□□□ -1.19
SMG1-201ENST00000330588 FCGRTP55899 365 aa7.62□□□□□ -1.19
SMG1-201ENST00000330588 VAC14Q08AM6 782 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms