RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 RASGRP4Q8TDF6 673 aa17.29■□□□□ 0.36
BRCC3-201ENST00000330045 GPR101Q96P66 508 aaPredicted RBP17.29■□□□□ 0.36
BRCC3-201ENST00000330045 ZCCHC17Q9NP64 241 aaKnown RBP17.29■□□□□ 0.36
BRCC3-201ENST00000330045 CCDC88AQ3V6T2 1871 aa17.28■□□□□ 0.36
BRCC3-201ENST00000330045 CCDC194A0A1B0GVG4 234 aa17.28■□□□□ 0.36
BRCC3-201ENST00000330045 RGL2O15211 777 aa17.28■□□□□ 0.36
BRCC3-201ENST00000330045 APBA3O96018 575 aa17.28■□□□□ 0.36
BRCC3-201ENST00000330045 USP17L8P0C7I0 530 aa17.28■□□□□ 0.36
BRCC3-201ENST00000330045 ARHGAP25P42331 645 aa17.28■□□□□ 0.36
BRCC3-201ENST00000330045 SLC27A3Q5K4L6 730 aa17.28■□□□□ 0.36
BRCC3-201ENST00000330045 IRF2BP1Q8IU81 584 aa17.28■□□□□ 0.36
BRCC3-201ENST00000330045 STAG2Q8N3U4 1231 aa17.28■□□□□ 0.36
BRCC3-201ENST00000330045 SLF1Q9BQI6 1058 aa17.28■□□□□ 0.36
BRCC3-201ENST00000330045 ANKRD2Q9GZV1 360 aa17.28■□□□□ 0.36
BRCC3-201ENST00000330045 RGS17Q9UGC6 210 aaPredicted RBP17.28■□□□□ 0.36
BRCC3-201ENST00000330045 ZNF772Q68DY9 489 aaPredicted RBP17.28■□□□□ 0.36
BRCC3-201ENST00000330045 TMED8Q6PL24 325 aaPredicted RBP17.28■□□□□ 0.36
BRCC3-201ENST00000330045 RASSF8Q8NHQ8 419 aa17.28■□□□□ 0.36
BRCC3-201ENST00000330045 HNRNPLLQ8WVV9 542 aaKnown RBP17.28■□□□□ 0.36
BRCC3-201ENST00000330045 IL17RBQ9NRM6 502 aa17.28■□□□□ 0.36
BRCC3-201ENST00000330045 TRIM49BA6NDI0 452 aa17.27■□□□□ 0.36
BRCC3-201ENST00000330045 NAALADL2Q58DX5 795 aa17.27■□□□□ 0.36
BRCC3-201ENST00000330045 MSANTD4Q8NCY6 345 aa17.27■□□□□ 0.36
BRCC3-201ENST00000330045 RAB21Q9UL25 225 aa17.27■□□□□ 0.36
BRCC3-201ENST00000330045 M0R2N6 131 aa17.27■□□□□ 0.35
BRCC3-201ENST00000330045 MAP2K7O14733 419 aa17.27■□□□□ 0.35
BRCC3-201ENST00000330045 KCNB1Q14721 858 aa17.27■□□□□ 0.35
BRCC3-201ENST00000330045 WHAMMP3Q1A5X7 153 aa17.27■□□□□ 0.35
BRCC3-201ENST00000330045 TYW1BQ6NUM6 668 aa17.27■□□□□ 0.35
BRCC3-201ENST00000330045 DZIP1Q86YF9 867 aaKnown RBP17.27■□□□□ 0.35
BRCC3-201ENST00000330045 MB21D1Q8N884 522 aa17.27■□□□□ 0.35
BRCC3-201ENST00000330045 CHP1Q99653 195 aa17.27■□□□□ 0.35
BRCC3-201ENST00000330045 SERPINB2P05120 415 aa17.26■□□□□ 0.35
BRCC3-201ENST00000330045 USP5P45974 858 aa17.26■□□□□ 0.35
BRCC3-201ENST00000330045 GNAQP50148 359 aa17.26■□□□□ 0.35
BRCC3-201ENST00000330045 C12orf60Q5U649 245 aa17.26■□□□□ 0.35
BRCC3-201ENST00000330045 ANKS1AQ92625 1134 aa17.26■□□□□ 0.35
BRCC3-201ENST00000330045 TMEM60Q9H2L4 133 aa17.26■□□□□ 0.35
BRCC3-201ENST00000330045 PCDHA6Q9UN73 950 aa17.26■□□□□ 0.35
BRCC3-201ENST00000330045 PCDHA8Q9Y5H6 950 aa17.26■□□□□ 0.35
BRCC3-201ENST00000330045 EPN1Q9Y6I3 576 aaPredicted RBP17.26■□□□□ 0.35
BRCC3-201ENST00000330045 TTC26A0AVF1 554 aa17.26■□□□□ 0.35
BRCC3-201ENST00000330045 PP2D1A8MPX8 630 aa17.26■□□□□ 0.35
BRCC3-201ENST00000330045 NDUFA10O95299 355 aa17.26■□□□□ 0.35
BRCC3-201ENST00000330045 UBA7P41226 1012 aa17.26■□□□□ 0.35
BRCC3-201ENST00000330045 PMS1P54277 932 aaKnown RBP17.26■□□□□ 0.35
BRCC3-201ENST00000330045 GRM4Q14833 912 aa17.26■□□□□ 0.35
BRCC3-201ENST00000330045 SPTY2D1Q68D10 685 aaPredicted RBP17.26■□□□□ 0.35
BRCC3-201ENST00000330045 OR8K1Q8NGG5 319 aa17.26■□□□□ 0.35
BRCC3-201ENST00000330045 PNKPQ96T60 521 aa17.26■□□□□ 0.35
BRCC3-201ENST00000330045 CALCOCO1Q9P1Z2 691 aa17.26■□□□□ 0.35
BRCC3-201ENST00000330045 MAD2L2Q9UI95 211 aa17.26■□□□□ 0.35
BRCC3-201ENST00000330045 CTAGE15A4D2H0 777 aa17.25■□□□□ 0.35
BRCC3-201ENST00000330045 LGALS16A8MUM7 142 aa17.25■□□□□ 0.35
BRCC3-201ENST00000330045 ZBTB22O15209 634 aa17.25■□□□□ 0.35
BRCC3-201ENST00000330045 MYL1P05976 194 aa17.25■□□□□ 0.35
BRCC3-201ENST00000330045 CTAGE8P0CG41 777 aa17.25■□□□□ 0.35
BRCC3-201ENST00000330045 ADRA2BP18089 450 aa17.25■□□□□ 0.35
BRCC3-201ENST00000330045 EEF1GP26641 437 aaKnown RBP17.25■□□□□ 0.35
BRCC3-201ENST00000330045 NT5C2P49902 561 aa17.25■□□□□ 0.35
BRCC3-201ENST00000330045 STIM1Q13586 685 aa17.25■□□□□ 0.35
BRCC3-201ENST00000330045 INF2Q27J81 1249 aa17.25■□□□□ 0.35
BRCC3-201ENST00000330045 BEND6Q5SZJ8 279 aaPredicted RBP17.25■□□□□ 0.35
BRCC3-201ENST00000330045 CTAGE6Q86UF2 777 aa17.25■□□□□ 0.35
BRCC3-201ENST00000330045 CTAGE4Q8IX94 777 aa17.25■□□□□ 0.35
BRCC3-201ENST00000330045 DYNLL2Q96FJ2 89 aa17.25■□□□□ 0.35
BRCC3-201ENST00000330045 THAP9Q9H5L6 903 aa17.25■□□□□ 0.35
BRCC3-201ENST00000330045 MKNK2Q9HBH9 465 aa17.25■□□□□ 0.35
BRCC3-201ENST00000330045 LUC7L2Q9Y383 392 aaKnown RBP17.25■□□□□ 0.35
BRCC3-201ENST00000330045 A0A1W2PQC6 194 aa17.25■□□□□ 0.35
BRCC3-201ENST00000330045 PES1O00541 588 aaKnown RBP17.25■□□□□ 0.35
BRCC3-201ENST00000330045 KLRC4O43908 158 aa17.25■□□□□ 0.35
BRCC3-201ENST00000330045 ERLIN1O75477 346 aa17.25■□□□□ 0.35
BRCC3-201ENST00000330045 TFRCP02786 760 aaKnown RBP17.25■□□□□ 0.35
BRCC3-201ENST00000330045 GALNT17Q6IS24 598 aa17.25■□□□□ 0.35
BRCC3-201ENST00000330045 POTEAQ6S8J7 498 aa17.25■□□□□ 0.35
BRCC3-201ENST00000330045 CCDC148Q8NFR7 591 aa17.25■□□□□ 0.35
BRCC3-201ENST00000330045 CCSER1Q9C0I3 900 aa17.25■□□□□ 0.35
BRCC3-201ENST00000330045 MKRN1Q9UHC7 482 aaKnown RBP17.25■□□□□ 0.35
BRCC3-201ENST00000330045 PSMA7O14818 248 aa17.24■□□□□ 0.35
BRCC3-201ENST00000330045 RHOBTB3O94955 611 aa17.24■□□□□ 0.35
BRCC3-201ENST00000330045 RXRBP28702 533 aa17.24■□□□□ 0.35
BRCC3-201ENST00000330045 ST5P78524 1137 aa17.24■□□□□ 0.35
BRCC3-201ENST00000330045 CCDC178Q5BJE1 867 aa17.24■□□□□ 0.35
BRCC3-201ENST00000330045 DAGLBQ8NCG7 672 aa17.24■□□□□ 0.35
BRCC3-201ENST00000330045 ZNF507Q8TCN5 953 aa17.24■□□□□ 0.35
BRCC3-201ENST00000330045 TRIM47Q96LD4 638 aa17.24■□□□□ 0.35
BRCC3-201ENST00000330045 PLIN2Q99541 437 aa17.24■□□□□ 0.35
BRCC3-201ENST00000330045 KBTBD4Q9NVX7 518 aa17.24■□□□□ 0.35
BRCC3-201ENST00000330045 MYO6Q9UM54 1294 aa17.24■□□□□ 0.35
BRCC3-201ENST00000330045 REXO2Q9Y3B8 237 aaKnown RBP17.24■□□□□ 0.35
BRCC3-201ENST00000330045 RHOXF2BP0C7M4 288 aa17.24■□□□□ 0.35
BRCC3-201ENST00000330045 SEMA3FQ13275 785 aa17.24■□□□□ 0.35
BRCC3-201ENST00000330045 TSR1Q2NL82 804 aaKnown RBP17.24■□□□□ 0.35
BRCC3-201ENST00000330045 HDXQ7Z353 690 aa17.24■□□□□ 0.35
BRCC3-201ENST00000330045 HEATR3Q7Z4Q2 680 aa17.24■□□□□ 0.35
BRCC3-201ENST00000330045 COL23A1Q86Y22 540 aaPredicted RBP17.24■□□□□ 0.35
BRCC3-201ENST00000330045 DNAJC7Q99615 494 aa17.24■□□□□ 0.35
BRCC3-201ENST00000330045 RHOXF2Q9BQY4 288 aa17.24■□□□□ 0.35
BRCC3-201ENST00000330045 MAGEC2Q9UBF1 373 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms