RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 MTMR8Q96EF0 704 aa23.12■■□□□ 1.29
RIPPLY3-201ENST00000329553 TTC12Q9H892 705 aaPredicted RBP23.12■■□□□ 1.29
RIPPLY3-201ENST00000329553 PPP1R11O60927 126 aaPredicted RBP23.11■■□□□ 1.29
RIPPLY3-201ENST00000329553 ATP2C1P98194 919 aaPredicted RBP23.11■■□□□ 1.29
RIPPLY3-201ENST00000329553 RASA3Q14644 834 aa23.11■■□□□ 1.29
RIPPLY3-201ENST00000329553 ZNF541Q9H0D2 1346 aa23.11■■□□□ 1.29
RIPPLY3-201ENST00000329553 ESYT2A0FGR8 921 aa23.1■■□□□ 1.29
RIPPLY3-201ENST00000329553 NDUFB10O96000 172 aa23.1■■□□□ 1.29
RIPPLY3-201ENST00000329553 INF2Q27J81 1249 aa23.1■■□□□ 1.29
RIPPLY3-201ENST00000329553 USP49Q70CQ1 688 aa23.1■■□□□ 1.29
RIPPLY3-201ENST00000329553 FAM13BQ9NYF5 915 aa23.1■■□□□ 1.29
RIPPLY3-201ENST00000329553 TNNI2P48788 182 aa23.1■■□□□ 1.29
RIPPLY3-201ENST00000329553 TBC1D10BQ4KMP7 808 aaPredicted RBP23.1■■□□□ 1.29
RIPPLY3-201ENST00000329553 NUP88Q99567 741 aaPredicted RBP23.1■■□□□ 1.29
RIPPLY3-201ENST00000329553 KIAA1468Q9P260 1216 aa23.1■■□□□ 1.29
RIPPLY3-201ENST00000329553 ZBTB5O15062 677 aa23.09■■□□□ 1.29
RIPPLY3-201ENST00000329553 MAP3K10Q02779 954 aa23.09■■□□□ 1.29
RIPPLY3-201ENST00000329553 NOLC1Q14978 699 aaKnown RBP eCLIP23.09■■□□□ 1.29
RIPPLY3-201ENST00000329553 LONRF3Q496Y0 759 aa23.09■■□□□ 1.29
RIPPLY3-201ENST00000329553 ARHGAP27Q6ZUM4 889 aa23.09■■□□□ 1.29
RIPPLY3-201ENST00000329553 FERMT2Q96AC1 680 aa23.09■■□□□ 1.29
RIPPLY3-201ENST00000329553 GMCL1Q96IK5 515 aa23.09■■□□□ 1.29
RIPPLY3-201ENST00000329553 DNAJC25Q9H1X3 360 aa23.09■■□□□ 1.29
RIPPLY3-201ENST00000329553 ZBTB21Q9ULJ3 1066 aa23.09■■□□□ 1.29
RIPPLY3-201ENST00000329553 A0A087WWV3 80 aa23.09■■□□□ 1.29
RIPPLY3-201ENST00000329553 ASTN2O75129 1339 aaPredicted RBP23.09■■□□□ 1.29
RIPPLY3-201ENST00000329553 ECE1P42892 770 aa23.09■■□□□ 1.29
RIPPLY3-201ENST00000329553 C4orf32Q8N8J7 132 aa23.09■■□□□ 1.29
RIPPLY3-201ENST00000329553 PRKCSHP14314 528 aaPredicted RBP23.08■■□□□ 1.29
RIPPLY3-201ENST00000329553 KRT25Q7Z3Z0 450 aa23.08■■□□□ 1.29
RIPPLY3-201ENST00000329553 ACER1Q8TDN7 264 aa23.08■■□□□ 1.29
RIPPLY3-201ENST00000329553 FHDC1Q9C0D6 1143 aaPredicted RBP23.08■■□□□ 1.29
RIPPLY3-201ENST00000329553 PDCL3Q9H2J4 239 aa23.08■■□□□ 1.29
RIPPLY3-201ENST00000329553 SPTLC3Q9NUV7 552 aa23.08■■□□□ 1.29
RIPPLY3-201ENST00000329553 BIN2Q9UBW5 565 aaPredicted RBP23.08■■□□□ 1.29
RIPPLY3-201ENST00000329553 TEPSINQ96N21 525 aa23.08■■□□□ 1.28
RIPPLY3-201ENST00000329553 CAP2P40123 477 aa23.07■■□□□ 1.28
RIPPLY3-201ENST00000329553 PLCB2Q00722 1185 aa23.07■■□□□ 1.28
RIPPLY3-201ENST00000329553 KRBA2Q6ZNG9 492 aa23.07■■□□□ 1.28
RIPPLY3-201ENST00000329553 EPSTI1Q96J88 318 aa23.07■■□□□ 1.28
RIPPLY3-201ENST00000329553 CBX8Q9HC52 389 aa23.07■■□□□ 1.28
RIPPLY3-201ENST00000329553 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.07■■□□□ 1.28
RIPPLY3-201ENST00000329553 VWA3AA6NCI4 1184 aa23.06■■□□□ 1.28
RIPPLY3-201ENST00000329553 DYNC1I1O14576 645 aa23.06■■□□□ 1.28
RIPPLY3-201ENST00000329553 POLR2DO15514 142 aaKnown RBP23.06■■□□□ 1.28
RIPPLY3-201ENST00000329553 TPM3P06753 285 aa23.06■■□□□ 1.28
RIPPLY3-201ENST00000329553 NONOQ15233 471 aaKnown RBP eCLIP23.06■■□□□ 1.28
RIPPLY3-201ENST00000329553 IL17AQ16552 155 aa23.06■■□□□ 1.28
RIPPLY3-201ENST00000329553 JAKMIP3Q5VZ66 844 aa23.06■■□□□ 1.28
RIPPLY3-201ENST00000329553 ARHGEF10LQ9HCE6 1279 aa23.06■■□□□ 1.28
RIPPLY3-201ENST00000329553 TMEM260Q9NX78 707 aa23.06■■□□□ 1.28
RIPPLY3-201ENST00000329553 SYNPO2Q9UMS6 1093 aa23.06■■□□□ 1.28
RIPPLY3-201ENST00000329553 BMP3P12645 472 aa23.06■■□□□ 1.28
RIPPLY3-201ENST00000329553 ADCY7P51828 1080 aa23.06■■□□□ 1.28
RIPPLY3-201ENST00000329553 TNFAIP1Q13829 316 aa23.06■■□□□ 1.28
RIPPLY3-201ENST00000329553 STX1AQ16623 288 aa23.06■■□□□ 1.28
RIPPLY3-201ENST00000329553 QRICH1Q2TAL8 776 aa23.06■■□□□ 1.28
RIPPLY3-201ENST00000329553 LUZP1Q86V48 1076 aa23.06■■□□□ 1.28
RIPPLY3-201ENST00000329553 REXO1Q8N1G1 1221 aaKnown RBP23.06■■□□□ 1.28
RIPPLY3-201ENST00000329553 CNNM3Q8NE01 707 aa23.06■■□□□ 1.28
RIPPLY3-201ENST00000329553 HACL1Q9UJ83 578 aa23.06■■□□□ 1.28
RIPPLY3-201ENST00000329553 TMX2Q9Y320 296 aa23.06■■□□□ 1.28
RIPPLY3-201ENST00000329553 ZNF165P49910 485 aa23.05■■□□□ 1.28
RIPPLY3-201ENST00000329553 KIF4BQ2VIQ3 1234 aa23.05■■□□□ 1.28
RIPPLY3-201ENST00000329553 KIAA1755Q5JYT7 1200 aa23.05■■□□□ 1.28
RIPPLY3-201ENST00000329553 SPICE1Q8N0Z3 855 aa23.05■■□□□ 1.28
RIPPLY3-201ENST00000329553 TMEM232C9JQI7 657 aa23.05■■□□□ 1.28
RIPPLY3-201ENST00000329553 PPP1R18Q6NYC8 613 aa23.05■■□□□ 1.28
RIPPLY3-201ENST00000329553 C11orf57Q6ZUT1 292 aaPredicted RBP23.05■■□□□ 1.28
RIPPLY3-201ENST00000329553 PDILTQ8N807 584 aa23.05■■□□□ 1.28
RIPPLY3-201ENST00000329553 ANO10Q9NW15 660 aa23.05■■□□□ 1.28
RIPPLY3-201ENST00000329553 PHF20L1A8MW92 1017 aa23.04■■□□□ 1.28
RIPPLY3-201ENST00000329553 CDC37Q16543 378 aaPredicted RBP23.04■■□□□ 1.28
RIPPLY3-201ENST00000329553 ARL6IP4Q66PJ3 421 aaKnown RBP23.04■■□□□ 1.28
RIPPLY3-201ENST00000329553 SYMPKQ92797 1274 aaKnown RBP23.04■■□□□ 1.28
RIPPLY3-201ENST00000329553 RIC8AQ9NPQ8 531 aa23.04■■□□□ 1.28
RIPPLY3-201ENST00000329553 SERTAD1Q9UHV2 236 aa23.04■■□□□ 1.28
RIPPLY3-201ENST00000329553 LMNB1P20700 586 aa23.04■■□□□ 1.28
RIPPLY3-201ENST00000329553 TBCKQ8TEA7 893 aa23.04■■□□□ 1.28
RIPPLY3-201ENST00000329553 TMEM60Q9H2L4 133 aa23.04■■□□□ 1.28
RIPPLY3-201ENST00000329553 KCNF1Q9H3M0 494 aa23.04■■□□□ 1.28
RIPPLY3-201ENST00000329553 A0A087X0B3 334 aa23.03■■□□□ 1.28
RIPPLY3-201ENST00000329553 CAVIN2O95810 425 aa23.03■■□□□ 1.28
RIPPLY3-201ENST00000329553 PNOCQ13519 176 aa23.03■■□□□ 1.28
RIPPLY3-201ENST00000329553 H7C1D1 291 aa23.02■■□□□ 1.28
RIPPLY3-201ENST00000329553 FOXN1O15353 648 aa23.02■■□□□ 1.28
RIPPLY3-201ENST00000329553 SNAP25P60880 206 aa23.02■■□□□ 1.28
RIPPLY3-201ENST00000329553 MDM2Q00987 491 aaPredicted RBP23.02■■□□□ 1.28
RIPPLY3-201ENST00000329553 LETM2Q2VYF4 491 aa23.02■■□□□ 1.28
RIPPLY3-201ENST00000329553 SYDE2Q5VT97 1194 aa23.02■■□□□ 1.28
RIPPLY3-201ENST00000329553 BTNL9Q6UXG8 535 aa23.02■■□□□ 1.28
RIPPLY3-201ENST00000329553 NEK8Q86SG6 692 aa23.02■■□□□ 1.28
RIPPLY3-201ENST00000329553 ELOA2Q8IYF1 753 aaPredicted RBP23.02■■□□□ 1.28
RIPPLY3-201ENST00000329553 DEFB129Q9H1M3 183 aa23.02■■□□□ 1.28
RIPPLY3-201ENST00000329553 GOLGA6L6A8MZA4 724 aa23.02■■□□□ 1.28
RIPPLY3-201ENST00000329553 BIN1O00499 593 aa23.02■■□□□ 1.28
RIPPLY3-201ENST00000329553 IKQ13123 557 aaPredicted RBP23.02■■□□□ 1.28
RIPPLY3-201ENST00000329553 TUBE1Q9UJT0 475 aa23.02■■□□□ 1.28
RIPPLY3-201ENST00000329553 PCDHA1Q9Y5I3 950 aa23.02■■□□□ 1.28
RIPPLY3-201ENST00000329553 ASNSP08243 561 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms