RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 C6orf222P0C671 652 aaPredicted RBP29.72■■■□□ 2.35
PPP4R4-202ENST00000328839 CTDSPL2Q05D32 466 aa29.72■■■□□ 2.35
PPP4R4-202ENST00000328839 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.72■■■□□ 2.35
PPP4R4-202ENST00000328839 ARMCX2Q7L311 632 aa29.72■■■□□ 2.35
PPP4R4-202ENST00000328839 CHURC1Q8WUH1 139 aa29.72■■■□□ 2.35
PPP4R4-202ENST00000328839 ABHD16BQ9H3Z7 469 aa29.72■■■□□ 2.35
PPP4R4-202ENST00000328839 DCDC2CA8MYV0 355 aa29.71■■■□□ 2.35
PPP4R4-202ENST00000328839 FDX1P10109 184 aa29.71■■■□□ 2.35
PPP4R4-202ENST00000328839 MCCP23508 829 aa29.71■■■□□ 2.35
PPP4R4-202ENST00000328839 CCDC144BQ3MJ40 725 aa29.71■■■□□ 2.35
PPP4R4-202ENST00000328839 FAM160B2Q86V87 743 aa29.71■■■□□ 2.35
PPP4R4-202ENST00000328839 KLHDC9Q8NEP7 349 aa29.71■■■□□ 2.35
PPP4R4-202ENST00000328839 FGD4Q96M96 766 aa29.71■■■□□ 2.35
PPP4R4-202ENST00000328839 ACAD9Q9H845 621 aa29.71■■■□□ 2.35
PPP4R4-202ENST00000328839 SPC25Q9HBM1 224 aa29.71■■■□□ 2.35
PPP4R4-202ENST00000328839 KIAA0355O15063 1070 aa29.7■■■□□ 2.35
PPP4R4-202ENST00000328839 PPP4R3BQ5MIZ7 849 aa29.7■■■□□ 2.35
PPP4R4-202ENST00000328839 CCDC144CPQ8IYA2 1237 aa29.7■■■□□ 2.35
PPP4R4-202ENST00000328839 VTI1AQ96AJ9 217 aa29.7■■■□□ 2.35
PPP4R4-202ENST00000328839 GMCL1Q96IK5 515 aa29.7■■■□□ 2.35
PPP4R4-202ENST00000328839 RNPC3Q96LT9 517 aaKnown RBP29.7■■■□□ 2.35
PPP4R4-202ENST00000328839 AGBL1Q96MI9 1066 aa29.7■■■□□ 2.35
PPP4R4-202ENST00000328839 INCENPQ9NQS7 918 aa29.7■■■□□ 2.35
PPP4R4-202ENST00000328839 RNF146Q9NTX7 359 aa29.7■■■□□ 2.35
PPP4R4-202ENST00000328839 MTMR7Q9Y216 660 aa29.7■■■□□ 2.35
PPP4R4-202ENST00000328839 ADCY6O43306 1168 aa29.69■■■□□ 2.34
PPP4R4-202ENST00000328839 IRX5P78411 483 aaPredicted RBP29.69■■■□□ 2.34
PPP4R4-202ENST00000328839 CNTN2Q02246 1040 aa29.69■■■□□ 2.34
PPP4R4-202ENST00000328839 FPGSQ05932 587 aa29.69■■■□□ 2.34
PPP4R4-202ENST00000328839 ANKRD45Q5TZF3 282 aa29.69■■■□□ 2.34
PPP4R4-202ENST00000328839 KCTD1Q719H9 257 aa29.69■■■□□ 2.34
PPP4R4-202ENST00000328839 STAG1Q8WVM7 1258 aa29.69■■■□□ 2.34
PPP4R4-202ENST00000328839 GLT1D1Q96MS3 346 aa29.69■■■□□ 2.34
PPP4R4-202ENST00000328839 NMT2O60551 498 aa29.68■■■□□ 2.34
PPP4R4-202ENST00000328839 FAAP100Q0VG06 881 aa29.68■■■□□ 2.34
PPP4R4-202ENST00000328839 CCSAPQ6IQ19 270 aaPredicted RBP29.68■■■□□ 2.34
PPP4R4-202ENST00000328839 CCDC174Q6PII3 467 aa29.68■■■□□ 2.34
PPP4R4-202ENST00000328839 ANKRD33Q7Z3H0 272 aa29.68■■■□□ 2.34
PPP4R4-202ENST00000328839 PCSK9Q8NBP7 692 aaKnown RBP29.68■■■□□ 2.34
PPP4R4-202ENST00000328839 TOX2Q96NM4 488 aa29.68■■■□□ 2.34
PPP4R4-202ENST00000328839 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.68■■■□□ 2.34
PPP4R4-202ENST00000328839 FOXP2O15409 715 aa29.67■■■□□ 2.34
PPP4R4-202ENST00000328839 RANBP6O60518 1105 aaKnown RBP29.67■■■□□ 2.34
PPP4R4-202ENST00000328839 ALAS1P13196 640 aa29.67■■■□□ 2.34
PPP4R4-202ENST00000328839 CST5P28325 142 aaPredicted RBP29.67■■■□□ 2.34
PPP4R4-202ENST00000328839 EPHB4P54760 987 aa29.67■■■□□ 2.34
PPP4R4-202ENST00000328839 RRP1P56182 461 aaKnown RBP29.67■■■□□ 2.34
PPP4R4-202ENST00000328839 SMAD3P84022 425 aaKnown RBP29.67■■■□□ 2.34
PPP4R4-202ENST00000328839 SALL3Q9BXA9 1300 aa29.67■■■□□ 2.34
PPP4R4-202ENST00000328839 A0A0C4DFX4 3053 aa29.66■■■□□ 2.34
PPP4R4-202ENST00000328839 ASGR1P07306 291 aa29.66■■■□□ 2.34
PPP4R4-202ENST00000328839 SNAP25P60880 206 aa29.66■■■□□ 2.34
PPP4R4-202ENST00000328839 GNASQ5JWF2 1037 aa29.66■■■□□ 2.34
PPP4R4-202ENST00000328839 NOL8Q76FK4 1167 aaKnown RBP29.66■■■□□ 2.34
PPP4R4-202ENST00000328839 TRERF1Q96PN7 1200 aa29.66■■■□□ 2.34
PPP4R4-202ENST00000328839 A1CFQ9NQ94 594 aaKnown RBP29.66■■■□□ 2.34
PPP4R4-202ENST00000328839 IL17RBQ9NRM6 502 aa29.66■■■□□ 2.34
PPP4R4-202ENST00000328839 ZNF536O15090 1300 aa29.66■■■□□ 2.34
PPP4R4-202ENST00000328839 GJA9P57773 515 aa29.65■■■□□ 2.34
PPP4R4-202ENST00000328839 VPS53Q5VIR6 699 aa29.65■■■□□ 2.34
PPP4R4-202ENST00000328839 RASGRP2Q7LDG7 609 aa29.65■■■□□ 2.34
PPP4R4-202ENST00000328839 FAM133AQ8N9E0 248 aa29.65■■■□□ 2.34
PPP4R4-202ENST00000328839 EVI5LQ96CN4 794 aa29.65■■■□□ 2.34
PPP4R4-202ENST00000328839 CDX2Q99626 313 aaPredicted RBP29.65■■■□□ 2.34
PPP4R4-202ENST00000328839 UPF3AQ9H1J1 476 aaKnown RBP29.65■■■□□ 2.34
PPP4R4-202ENST00000328839 SEMA6BQ9H3T3 888 aa29.65■■■□□ 2.34
PPP4R4-202ENST00000328839 TOMM22Q9NS69 142 aa29.65■■■□□ 2.34
PPP4R4-202ENST00000328839 MROH7Q68CQ1 1323 aa29.65■■■□□ 2.34
PPP4R4-202ENST00000328839 CCDC96Q2M329 555 aa29.64■■■□□ 2.34
PPP4R4-202ENST00000328839 TKFCQ3LXA3 575 aa29.64■■■□□ 2.34
PPP4R4-202ENST00000328839 RCSD1Q6JBY9 416 aa29.64■■■□□ 2.34
PPP4R4-202ENST00000328839 LRRC37A2A6NM11 1700 aa29.64■■■□□ 2.34
PPP4R4-202ENST00000328839 ELP1O95163 1332 aa29.64■■■□□ 2.34
PPP4R4-202ENST00000328839 CRBNQ96SW2 442 aa29.63■■■□□ 2.33
PPP4R4-202ENST00000328839 PRR12Q9ULL5 1215 aa29.63■■■□□ 2.33
PPP4R4-202ENST00000328839 A0A0U1RQG5 324 aaPredicted RBP29.62■■■□□ 2.33
PPP4R4-202ENST00000328839 ASB14A6NK59 587 aa29.62■■■□□ 2.33
PPP4R4-202ENST00000328839 TNFAIP2Q03169 654 aa29.62■■■□□ 2.33
PPP4R4-202ENST00000328839 PHF6Q8IWS0 365 aaKnown RBP eCLIP29.62■■■□□ 2.33
PPP4R4-202ENST00000328839 KATNBL1Q9H079 304 aa29.62■■■□□ 2.33
PPP4R4-202ENST00000328839 UNC80Q8N2C7 3258 aa29.61■■■□□ 2.33
PPP4R4-202ENST00000328839 C11orf97A0A1B0GVM6 126 aaPredicted RBP29.61■■■□□ 2.33
PPP4R4-202ENST00000328839 SOWAHBA6NEL2 793 aa29.61■■■□□ 2.33
PPP4R4-202ENST00000328839 PLA2G6O60733 806 aa29.61■■■□□ 2.33
PPP4R4-202ENST00000328839 TIMP1P01033 207 aa29.61■■■□□ 2.33
PPP4R4-202ENST00000328839 BEX3Q00994 111 aa29.61■■■□□ 2.33
PPP4R4-202ENST00000328839 RRP12Q5JTH9 1297 aaKnown RBP29.61■■■□□ 2.33
PPP4R4-202ENST00000328839 TTYH1Q9H313 450 aaPredicted RBP29.61■■■□□ 2.33
PPP4R4-202ENST00000328839 HELLSQ9NRZ9 838 aa29.61■■■□□ 2.33
PPP4R4-202ENST00000328839 ANAPC4Q9UJX5 808 aa29.61■■■□□ 2.33
PPP4R4-202ENST00000328839 TBX21Q9UL17 535 aa29.61■■■□□ 2.33
PPP4R4-202ENST00000328839 CCPG1Q9ULG6 757 aa29.61■■■□□ 2.33
PPP4R4-202ENST00000328839 PDE1AP54750 535 aa29.6■■■□□ 2.33
PPP4R4-202ENST00000328839 MUM1L1Q5H9M0 696 aa29.6■■■□□ 2.33
PPP4R4-202ENST00000328839 NSMFQ6X4W1 530 aa29.6■■■□□ 2.33
PPP4R4-202ENST00000328839 DDX49Q9Y6V7 483 aaKnown RBP29.6■■■□□ 2.33
PPP4R4-202ENST00000328839 LCTP09848 1927 aa29.6■■■□□ 2.33
PPP4R4-202ENST00000328839 ARVCFO00192 962 aa29.59■■■□□ 2.33
PPP4R4-202ENST00000328839 MYLIPQ8WY64 445 aa29.59■■■□□ 2.33
PPP4R4-202ENST00000328839 FAM227BQ96M60 508 aa29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms