RNA–Protein interactions for RNA: ENST00000327968.6

DDX53-201, Transcript of DEAD-box helicase 53, humanhuman

APPRIS P1 BASIC

Gene DDX53, Length 3,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53-201ENST00000327968 NBPF15Q8N660 670 aa10.66□□□□□ -0.7
DDX53-201ENST00000327968 TSEN2Q8NCE0 465 aaKnown RBP10.66□□□□□ -0.7
DDX53-201ENST00000327968 PLBD2Q8NHP8 589 aa10.66□□□□□ -0.7
DDX53-201ENST00000327968 BRMS1Q9HCU9 246 aa10.66□□□□□ -0.7
DDX53-201ENST00000327968 PLEKHA8P1O95397 391 aa10.65□□□□□ -0.7
DDX53-201ENST00000327968 XBP1P17861 261 aa10.65□□□□□ -0.7
DDX53-201ENST00000327968 CFAP58Q5T655 872 aa10.65□□□□□ -0.7
DDX53-201ENST00000327968 IQUBQ8NA54 791 aa10.65□□□□□ -0.7
DDX53-201ENST00000327968 OR2W6PQ8NHA6 318 aa10.65□□□□□ -0.7
DDX53-201ENST00000327968 WASF1Q92558 559 aa10.65□□□□□ -0.7
DDX53-201ENST00000327968 KANSL2Q9H9L4 492 aa10.65□□□□□ -0.7
DDX53-201ENST00000327968 PPP1R3GB7ZBB8 358 aa10.65□□□□□ -0.7
DDX53-201ENST00000327968 ZFYP08048 801 aaPredicted RBP10.65□□□□□ -0.7
DDX53-201ENST00000327968 ERCC5P28715 1186 aaPredicted RBP10.65□□□□□ -0.7
DDX53-201ENST00000327968 USP8P40818 1118 aa10.65□□□□□ -0.7
DDX53-201ENST00000327968 NTRK3Q16288 839 aa10.65□□□□□ -0.7
DDX53-201ENST00000327968 TCP11X2Q5H9J9 407 aa10.65□□□□□ -0.7
DDX53-201ENST00000327968 C8orf74Q6P047 294 aa10.65□□□□□ -0.7
DDX53-201ENST00000327968 CCNI2Q6ZMN8 369 aaPredicted RBP10.65□□□□□ -0.7
DDX53-201ENST00000327968 IFNL3Q8IZI9 196 aa10.65□□□□□ -0.7
DDX53-201ENST00000327968 IGDCC4Q8TDY8 1250 aa10.65□□□□□ -0.7
DDX53-201ENST00000327968 N4BP2L2Q92802 583 aaPredicted RBP10.65□□□□□ -0.7
DDX53-201ENST00000327968 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.65□□□□□ -0.7
DDX53-201ENST00000327968 NLRC4Q9NPP4 1024 aa10.65□□□□□ -0.7
DDX53-201ENST00000327968 SRPRBQ9Y5M8 271 aaKnown RBP10.65□□□□□ -0.7
DDX53-201ENST00000327968 AGPSO00116 658 aa10.65□□□□□ -0.71
DDX53-201ENST00000327968 NEBLO76041 1014 aa10.65□□□□□ -0.71
DDX53-201ENST00000327968 PMS1P54277 932 aaKnown RBP10.65□□□□□ -0.71
DDX53-201ENST00000327968 HERVK_113P62684 666 aa10.65□□□□□ -0.71
DDX53-201ENST00000327968 PPFIA1Q13136 1202 aa10.65□□□□□ -0.71
DDX53-201ENST00000327968 TRADDQ15628 312 aa10.65□□□□□ -0.71
DDX53-201ENST00000327968 ZNF654Q8IZM8 581 aa10.65□□□□□ -0.71
DDX53-201ENST00000327968 TRIM31Q9BZY9 425 aa10.65□□□□□ -0.71
DDX53-201ENST00000327968 UTYO14607 1347 aa10.64□□□□□ -0.71
DDX53-201ENST00000327968 ANKRD36CQ5JPF3 1778 aa10.64□□□□□ -0.71
DDX53-201ENST00000327968 PPP1R12BO60237 982 aaPredicted RBP10.64□□□□□ -0.71
DDX53-201ENST00000327968 CYLC1P35663 651 aaPredicted RBP10.64□□□□□ -0.71
DDX53-201ENST00000327968 PAFAH1B1P43034 410 aa10.64□□□□□ -0.71
DDX53-201ENST00000327968 CKAP4Q07065 602 aaKnown RBP10.64□□□□□ -0.71
DDX53-201ENST00000327968 NAA25Q14CX7 972 aa10.64□□□□□ -0.71
DDX53-201ENST00000327968 TTC38Q5R3I4 469 aa10.64□□□□□ -0.71
DDX53-201ENST00000327968 LRP10Q7Z4F1 713 aa10.64□□□□□ -0.71
DDX53-201ENST00000327968 FANCBQ8NB91 859 aa10.64□□□□□ -0.71
DDX53-201ENST00000327968 GREM2Q9H772 168 aa10.64□□□□□ -0.71
DDX53-201ENST00000327968 NHEJ1Q9H9Q4 299 aaPredicted RBP10.64□□□□□ -0.71
DDX53-201ENST00000327968 EPB41L5Q9HCM4 733 aa10.64□□□□□ -0.71
DDX53-201ENST00000327968 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.64□□□□□ -0.71
DDX53-201ENST00000327968 PRPF6O94906 941 aaKnown RBP10.64□□□□□ -0.71
DDX53-201ENST00000327968 ITGA6P23229 1130 aa10.64□□□□□ -0.71
DDX53-201ENST00000327968 CDC25CP30307 473 aa10.64□□□□□ -0.71
DDX53-201ENST00000327968 NF2P35240 595 aa10.64□□□□□ -0.71
DDX53-201ENST00000327968 SF3B2Q13435 895 aaKnown RBP10.64□□□□□ -0.71
DDX53-201ENST00000327968 KCNV1Q6PIU1 500 aa10.64□□□□□ -0.71
DDX53-201ENST00000327968 CSGALNACT2Q8N6G5 542 aa10.64□□□□□ -0.71
DDX53-201ENST00000327968 FMNL1O95466 1100 aaPredicted RBP10.64□□□□□ -0.71
DDX53-201ENST00000327968 FTCDO95954 541 aa10.64□□□□□ -0.71
DDX53-201ENST00000327968 VEGFAP15692 232 aaPredicted RBP10.64□□□□□ -0.71
DDX53-201ENST00000327968 KRT2P35908 639 aa10.64□□□□□ -0.71
DDX53-201ENST00000327968 RABL6Q3YEC7 729 aaPredicted RBP10.64□□□□□ -0.71
DDX53-201ENST00000327968 CEP85LQ5SZL2 805 aa10.64□□□□□ -0.71
DDX53-201ENST00000327968 GPKOWQ92917 476 aaPredicted RBP eCLIP10.64□□□□□ -0.71
DDX53-201ENST00000327968 PLCD4Q9BRC7 762 aa10.64□□□□□ -0.71
DDX53-201ENST00000327968 HAUS4Q9H6D7 363 aa10.64□□□□□ -0.71
DDX53-201ENST00000327968 CAPN6Q9Y6Q1 641 aa10.64□□□□□ -0.71
DDX53-201ENST00000327968 NMT2O60551 498 aa10.63□□□□□ -0.71
DDX53-201ENST00000327968 DEXIO95424 95 aa10.63□□□□□ -0.71
DDX53-201ENST00000327968 PEX19P40855 299 aa10.63□□□□□ -0.71
DDX53-201ENST00000327968 RASSF7Q02833 373 aa10.63□□□□□ -0.71
DDX53-201ENST00000327968 FAM47AQ5JRC9 791 aa10.63□□□□□ -0.71
DDX53-201ENST00000327968 APTXQ7Z2E3 356 aaKnown RBP10.63□□□□□ -0.71
DDX53-201ENST00000327968 TRAPPC11Q7Z392 1133 aa10.63□□□□□ -0.71
DDX53-201ENST00000327968 UHMK1Q8TAS1 419 aaKnown RBP10.63□□□□□ -0.71
DDX53-201ENST00000327968 IFIH1Q9BYX4 1025 aaKnown RBP10.63□□□□□ -0.71
DDX53-201ENST00000327968 GOLPH3Q9H4A6 298 aa10.63□□□□□ -0.71
DDX53-201ENST00000327968 CCDC172P0C7W6 258 aa10.63□□□□□ -0.71
DDX53-201ENST00000327968 CARSP49589 748 aaKnown RBP10.63□□□□□ -0.71
DDX53-201ENST00000327968 KRT83P78385 493 aa10.63□□□□□ -0.71
DDX53-201ENST00000327968 HDLBPQ00341 1268 aaKnown RBP10.63□□□□□ -0.71
DDX53-201ENST00000327968 CRACR2BQ8N4Y2 399 aaPredicted RBP10.63□□□□□ -0.71
DDX53-201ENST00000327968 CABS1Q96KC9 395 aa10.63□□□□□ -0.71
DDX53-201ENST00000327968 RNPC3Q96LT9 517 aaKnown RBP10.63□□□□□ -0.71
DDX53-201ENST00000327968 NOC4LQ9BVI4 516 aaKnown RBP10.63□□□□□ -0.71
DDX53-201ENST00000327968 CCDC113Q9H0I3 377 aa10.63□□□□□ -0.71
DDX53-201ENST00000327968 AFDNP55196 1824 aaKnown RBP10.63□□□□□ -0.71
DDX53-201ENST00000327968 MYH10P35580 1976 aa10.63□□□□□ -0.71
DDX53-201ENST00000327968 NKRFO15226 690 aaKnown RBP eCLIP10.63□□□□□ -0.71
DDX53-201ENST00000327968 EIF3HO15372 352 aaKnown RBP eCLIP10.63□□□□□ -0.71
DDX53-201ENST00000327968 RPN1P04843 607 aaKnown RBP10.63□□□□□ -0.71
DDX53-201ENST00000327968 FAM153BP0C7A2 387 aa10.63□□□□□ -0.71
DDX53-201ENST00000327968 PDHBP11177 359 aa10.63□□□□□ -0.71
DDX53-201ENST00000327968 MCM3P25205 808 aa10.63□□□□□ -0.71
DDX53-201ENST00000327968 TMOD1P28289 359 aa10.63□□□□□ -0.71
DDX53-201ENST00000327968 ADD2P35612 726 aa10.63□□□□□ -0.71
DDX53-201ENST00000327968 SARSP49591 514 aaKnown RBP10.63□□□□□ -0.71
DDX53-201ENST00000327968 FAM153CQ494X1 144 aa10.63□□□□□ -0.71
DDX53-201ENST00000327968 AKNAD1Q5T1N1 836 aa10.63□□□□□ -0.71
DDX53-201ENST00000327968 TEX2Q8IWB9 1127 aa10.63□□□□□ -0.71
DDX53-201ENST00000327968 LCORLQ8N3X6 602 aa10.63□□□□□ -0.71
DDX53-201ENST00000327968 TMEM87BQ96K49 555 aa10.63□□□□□ -0.71
DDX53-201ENST00000327968 ZIM3Q96PE6 472 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms