RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 GDPD2Q9HCC8 539 aa17.59■□□□□ 0.41
PRPF3-201ENST00000324862 RBM27Q9P2N5 1060 aaKnown RBP17.59■□□□□ 0.41
PRPF3-201ENST00000324862 ZNF157P51786 506 aaPredicted RBP17.59■□□□□ 0.41
PRPF3-201ENST00000324862 DNM1Q05193 864 aaKnown RBP17.59■□□□□ 0.41
PRPF3-201ENST00000324862 SPRYD7Q5W111 196 aa17.59■□□□□ 0.41
PRPF3-201ENST00000324862 FAM160B2Q86V87 743 aa17.59■□□□□ 0.41
PRPF3-201ENST00000324862 RAVER2Q9HCJ3 691 aaKnown RBP17.59■□□□□ 0.41
PRPF3-201ENST00000324862 ZNF536O15090 1300 aa17.59■□□□□ 0.41
PRPF3-201ENST00000324862 PTPRFP10586 1907 aa17.59■□□□□ 0.41
PRPF3-201ENST00000324862 SMCO2A6NFE2 343 aa17.58■□□□□ 0.41
PRPF3-201ENST00000324862 GRM1Q13255 1194 aa17.58■□□□□ 0.41
PRPF3-201ENST00000324862 ABT1Q9ULW3 272 aaKnown RBP17.58■□□□□ 0.41
PRPF3-201ENST00000324862 PLA2G6O60733 806 aa17.58■□□□□ 0.4
PRPF3-201ENST00000324862 SNAPC2Q13487 334 aa17.58■□□□□ 0.4
PRPF3-201ENST00000324862 GPAT2Q6NUI2 795 aa17.58■□□□□ 0.4
PRPF3-201ENST00000324862 FBXO11Q86XK2 927 aa17.58■□□□□ 0.4
PRPF3-201ENST00000324862 TFIP11Q9UBB9 837 aaKnown RBP17.58■□□□□ 0.4
PRPF3-201ENST00000324862 CEP350Q5VT06 3117 aa17.58■□□□□ 0.4
PRPF3-201ENST00000324862 SMCHD1A6NHR9 2005 aa17.58■□□□□ 0.4
PRPF3-201ENST00000324862 SPDYE16A6NNV3 312 aaPredicted RBP17.57■□□□□ 0.4
PRPF3-201ENST00000324862 USP17L15C9J2P7 530 aa17.57■□□□□ 0.4
PRPF3-201ENST00000324862 USP17L13C9JLJ4 530 aa17.57■□□□□ 0.4
PRPF3-201ENST00000324862 USP17L11C9JVI0 530 aa17.57■□□□□ 0.4
PRPF3-201ENST00000324862 USP17L18D6R9N7 530 aa17.57■□□□□ 0.4
PRPF3-201ENST00000324862 USP17L22D6RA61 530 aa17.57■□□□□ 0.4
PRPF3-201ENST00000324862 USP17L17D6RBQ6 530 aa17.57■□□□□ 0.4
PRPF3-201ENST00000324862 USP17L19D6RCP7 530 aa17.57■□□□□ 0.4
PRPF3-201ENST00000324862 USP17L20D6RJB6 530 aa17.57■□□□□ 0.4
PRPF3-201ENST00000324862 VWA5AO00534 786 aa17.57■□□□□ 0.4
PRPF3-201ENST00000324862 XBP1P17861 261 aa17.57■□□□□ 0.4
PRPF3-201ENST00000324862 CEBPZQ03701 1054 aaKnown RBP17.57■□□□□ 0.4
PRPF3-201ENST00000324862 USP17L24Q0WX57 530 aa17.57■□□□□ 0.4
PRPF3-201ENST00000324862 NBR1Q14596 966 aa17.57■□□□□ 0.4
PRPF3-201ENST00000324862 UBE2SQ16763 222 aa17.57■□□□□ 0.4
PRPF3-201ENST00000324862 BRI3BPQ8WY22 251 aa17.57■□□□□ 0.4
PRPF3-201ENST00000324862 TBC1D5Q92609 795 aa17.57■□□□□ 0.4
PRPF3-201ENST00000324862 PGBD1Q96JS3 809 aa17.57■□□□□ 0.4
PRPF3-201ENST00000324862 P2RX7Q99572 595 aaKnown RBP17.57■□□□□ 0.4
PRPF3-201ENST00000324862 AMNQ9BXJ7 453 aa17.57■□□□□ 0.4
PRPF3-201ENST00000324862 SLC38A10Q9HBR0 1119 aa17.57■□□□□ 0.4
PRPF3-201ENST00000324862 TMEM260Q9NX78 707 aa17.57■□□□□ 0.4
PRPF3-201ENST00000324862 OPLAHO14841 1288 aa17.57■□□□□ 0.4
PRPF3-201ENST00000324862 BAG4O95429 457 aaKnown RBP17.57■□□□□ 0.4
PRPF3-201ENST00000324862 DSG3P32926 999 aa17.57■□□□□ 0.4
PRPF3-201ENST00000324862 GNL2Q13823 731 aaKnown RBP17.57■□□□□ 0.4
PRPF3-201ENST00000324862 COG2Q14746 738 aa17.57■□□□□ 0.4
PRPF3-201ENST00000324862 RASAL3Q86YV0 1011 aa17.57■□□□□ 0.4
PRPF3-201ENST00000324862 HOMER2Q9NSB8 354 aa17.57■□□□□ 0.4
PRPF3-201ENST00000324862 CNPY2Q9Y2B0 182 aa17.57■□□□□ 0.4
PRPF3-201ENST00000324862 CCL15-CCL14A0A0B4J2E2 113 aa17.56■□□□□ 0.4
PRPF3-201ENST00000324862 CYP2C8P10632 490 aa17.56■□□□□ 0.4
PRPF3-201ENST00000324862 CCL15Q16663 113 aa17.56■□□□□ 0.4
PRPF3-201ENST00000324862 USP17L6PQ6QN14 398 aa17.56■□□□□ 0.4
PRPF3-201ENST00000324862 PROCA1Q8NCQ7 364 aaPredicted RBP17.56■□□□□ 0.4
PRPF3-201ENST00000324862 ZIC5Q96T25 663 aa17.56■□□□□ 0.4
PRPF3-201ENST00000324862 PTPN18Q99952 460 aa17.56■□□□□ 0.4
PRPF3-201ENST00000324862 ZMYND12Q9H0C1 365 aa17.56■□□□□ 0.4
PRPF3-201ENST00000324862 BIN2Q9UBW5 565 aaPredicted RBP17.56■□□□□ 0.4
PRPF3-201ENST00000324862 AGTPBP1Q9UPW5 1226 aa17.56■□□□□ 0.4
PRPF3-201ENST00000324862 RIPK3Q9Y572 518 aa17.56■□□□□ 0.4
PRPF3-201ENST00000324862 TRPM7Q96QT4 1865 aa17.56■□□□□ 0.4
PRPF3-201ENST00000324862 WNT7AO00755 349 aa17.56■□□□□ 0.4
PRPF3-201ENST00000324862 U2AF2P26368 475 aaKnown RBP eCLIP17.56■□□□□ 0.41e-7■■■■□ 21.8
PRPF3-201ENST00000324862 KRT2P35908 639 aa17.56■□□□□ 0.4
PRPF3-201ENST00000324862 ASCC2Q9H1I8 757 aaPredicted RBP17.56■□□□□ 0.4
PRPF3-201ENST00000324862 SH3GLB2Q9NR46 395 aa17.56■□□□□ 0.4
PRPF3-201ENST00000324862 PCDHA4Q9UN74 947 aa17.56■□□□□ 0.4
PRPF3-201ENST00000324862 TLL2Q9Y6L7 1015 aa17.56■□□□□ 0.4
PRPF3-201ENST00000324862 UNCXA6NJT0 531 aa17.55■□□□□ 0.4
PRPF3-201ENST00000324862 NCLP19338 710 aaKnown RBP17.55■□□□□ 0.4
PRPF3-201ENST00000324862 ATP2B1P20020 1258 aa17.55■□□□□ 0.4
PRPF3-201ENST00000324862 TMEM132BQ14DG7 1078 aa17.55■□□□□ 0.4
PRPF3-201ENST00000324862 SAFBQ15424 915 aaKnown RBP eCLIP17.55■□□□□ 0.4
PRPF3-201ENST00000324862 TPRNQ4KMQ1 711 aa17.55■□□□□ 0.4
PRPF3-201ENST00000324862 RGMBQ6NW40 437 aa17.55■□□□□ 0.4
PRPF3-201ENST00000324862 BLIDQ8IZY5 108 aa17.55■□□□□ 0.4
PRPF3-201ENST00000324862 TNFRSF25Q93038 417 aa17.55■□□□□ 0.4
PRPF3-201ENST00000324862 R3HDMLQ9H3Y0 253 aa17.55■□□□□ 0.4
PRPF3-201ENST00000324862 TMEM88BA6NKF7 163 aa17.55■□□□□ 0.4
PRPF3-201ENST00000324862 BTBD19C9JJ37 291 aa17.55■□□□□ 0.4
PRPF3-201ENST00000324862 JAKMIP3Q5VZ66 844 aa17.55■□□□□ 0.4
PRPF3-201ENST00000324862 NOSTRINQ8IVI9 506 aa17.55■□□□□ 0.4
PRPF3-201ENST00000324862 FAM43AQ8N2R8 423 aa17.55■□□□□ 0.4
PRPF3-201ENST00000324862 REPS2Q8NFH8 660 aa17.55■□□□□ 0.4
PRPF3-201ENST00000324862 CCDC148Q8NFR7 591 aa17.55■□□□□ 0.4
PRPF3-201ENST00000324862 CCPG1Q9ULG6 757 aa17.55■□□□□ 0.4
PRPF3-201ENST00000324862 PCDHA6Q9UN73 950 aa17.55■□□□□ 0.4
PRPF3-201ENST00000324862 PCDHA8Q9Y5H6 950 aa17.55■□□□□ 0.4
PRPF3-201ENST00000324862 RLFQ13129 1914 aa17.54■□□□□ 0.4
PRPF3-201ENST00000324862 M0R2N6 131 aa17.54■□□□□ 0.4
PRPF3-201ENST00000324862 HOXA7P31268 230 aaPredicted RBP17.54■□□□□ 0.4
PRPF3-201ENST00000324862 HOXA13P31271 388 aaPredicted RBP17.54■□□□□ 0.4
PRPF3-201ENST00000324862 HTRA3P83110 453 aa17.54■□□□□ 0.4
PRPF3-201ENST00000324862 PIK3AP1Q6ZUJ8 805 aa17.54■□□□□ 0.4
PRPF3-201ENST00000324862 ALAS1P13196 640 aa17.53■□□□□ 0.4
PRPF3-201ENST00000324862 GTF2A2P52657 109 aa17.53■□□□□ 0.4
PRPF3-201ENST00000324862 IRX3P78415 501 aaPredicted RBP17.53■□□□□ 0.4
PRPF3-201ENST00000324862 PLS1Q14651 629 aa17.53■□□□□ 0.4
PRPF3-201ENST00000324862 PAXIP1Q6ZW49 1069 aaPredicted RBP17.53■□□□□ 0.4
PRPF3-201ENST00000324862 FASTKD5Q7L8L6 764 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms