RNA–Protein interactions for RNA: ENST00000324659.12

NLRC3-201, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 5 BASIC

Gene NLRC3, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-201ENST00000324659 CXorf56Q9H5V9 222 aa13.51□□□□□ -0.25
NLRC3-201ENST00000324659 LIMA1Q9UHB6 759 aaKnown RBP13.51□□□□□ -0.25
NLRC3-201ENST00000324659 DUSP10Q9Y6W6 482 aa13.51□□□□□ -0.25
NLRC3-201ENST00000324659 BAZ2AQ9UIF9 1905 aaKnown RBP13.51□□□□□ -0.25
NLRC3-201ENST00000324659 SPATA31A1Q5TZJ5 1347 aa13.51□□□□□ -0.25
NLRC3-201ENST00000324659 PARP4Q9UKK3 1724 aaKnown RBP13.51□□□□□ -0.25
NLRC3-201ENST00000324659 GTPBP6O43824 516 aaPredicted RBP13.51□□□□□ -0.25
NLRC3-201ENST00000324659 TRIM21P19474 475 aaKnown RBP13.51□□□□□ -0.25
NLRC3-201ENST00000324659 LINC00116Q8NCU8 138 aa13.51□□□□□ -0.25
NLRC3-201ENST00000324659 HNRNPLLQ8WVV9 542 aaKnown RBP13.51□□□□□ -0.25
NLRC3-201ENST00000324659 BCL9O00512 1426 aa13.5□□□□□ -0.25
NLRC3-201ENST00000324659 MATR3P43243 847 aaKnown RBP eCLIP13.5□□□□□ -0.25
NLRC3-201ENST00000324659 ZNF658Q5TYW1 1059 aaPredicted RBP13.5□□□□□ -0.25
NLRC3-201ENST00000324659 TPTE2Q6XPS3 522 aa13.5□□□□□ -0.25
NLRC3-201ENST00000324659 JADE2Q9NQC1 790 aa13.5□□□□□ -0.25
NLRC3-201ENST00000324659 AGPAT5Q9NUQ2 364 aa13.5□□□□□ -0.25
NLRC3-201ENST00000324659 MCM9Q9NXL9 1143 aa13.5□□□□□ -0.25
NLRC3-201ENST00000324659 CNTNAP5Q8WYK1 1306 aa13.5□□□□□ -0.25
NLRC3-201ENST00000324659 G3V3G9 751 aa13.5□□□□□ -0.25
NLRC3-201ENST00000324659 BMP15O95972 392 aa13.5□□□□□ -0.25
NLRC3-201ENST00000324659 SCG2P13521 617 aa13.5□□□□□ -0.25
NLRC3-201ENST00000324659 SPAG1Q07617 926 aa13.5□□□□□ -0.25
NLRC3-201ENST00000324659 DCAF8Q5TAQ9 597 aa13.5□□□□□ -0.25
NLRC3-201ENST00000324659 SLC51AQ86UW1 340 aa13.5□□□□□ -0.25
NLRC3-201ENST00000324659 OR8K1Q8NGG5 319 aa13.5□□□□□ -0.25
NLRC3-201ENST00000324659 RNF40O75150 1001 aa13.49□□□□□ -0.25
NLRC3-201ENST00000324659 LRRC31Q6UY01 552 aa13.49□□□□□ -0.25
NLRC3-201ENST00000324659 MAGEC2Q9UBF1 373 aaPredicted RBP13.49□□□□□ -0.25
NLRC3-201ENST00000324659 SAP30BPQ9UHR5 308 aaKnown RBP13.49□□□□□ -0.25
NLRC3-201ENST00000324659 USP21Q9UK80 565 aa13.49□□□□□ -0.25
NLRC3-201ENST00000324659 STX8Q9UNK0 236 aa13.49□□□□□ -0.25
NLRC3-201ENST00000324659 MYH3P11055 1940 aa13.49□□□□□ -0.25
NLRC3-201ENST00000324659 ITIH6Q6UXX5 1313 aa13.49□□□□□ -0.25
NLRC3-201ENST00000324659 FAM205AQ6ZU69 1335 aa13.49□□□□□ -0.25
NLRC3-201ENST00000324659 TULP1O00294 542 aaPredicted RBP13.49□□□□□ -0.25
NLRC3-201ENST00000324659 SEMA3EO15041 775 aa13.49□□□□□ -0.25
NLRC3-201ENST00000324659 PRDX5P30044 214 aa13.49□□□□□ -0.25
NLRC3-201ENST00000324659 DNAJC21Q5F1R6 531 aaKnown RBP13.49□□□□□ -0.25
NLRC3-201ENST00000324659 IRF2BP1Q8IU81 584 aa13.49□□□□□ -0.25
NLRC3-201ENST00000324659 SMCR8Q8TEV9 937 aaPredicted RBP13.49□□□□□ -0.25
NLRC3-201ENST00000324659 TNFRSF25Q93038 417 aa13.49□□□□□ -0.25
NLRC3-201ENST00000324659 RIOK1Q9BRS2 568 aaKnown RBP13.49□□□□□ -0.25
NLRC3-201ENST00000324659 GBP3Q9H0R5 595 aa13.49□□□□□ -0.25
NLRC3-201ENST00000324659 VAT1LQ9HCJ6 419 aa13.49□□□□□ -0.25
NLRC3-201ENST00000324659 RBM28Q9NW13 759 aaKnown RBP13.49□□□□□ -0.25
NLRC3-201ENST00000324659 PSD3Q9NYI0 1048 aa13.49□□□□□ -0.25
NLRC3-201ENST00000324659 SAR1BQ9Y6B6 198 aa13.49□□□□□ -0.25
NLRC3-201ENST00000324659 NID2Q14112 1375 aa13.49□□□□□ -0.25
NLRC3-201ENST00000324659 H0YHG0 523 aa13.49□□□□□ -0.25
NLRC3-201ENST00000324659 C6orf229H3BNL8 230 aa13.49□□□□□ -0.25
NLRC3-201ENST00000324659 CCDC172P0C7W6 258 aa13.49□□□□□ -0.25
NLRC3-201ENST00000324659 HIBADHP31937 336 aaKnown RBP13.49□□□□□ -0.25
NLRC3-201ENST00000324659 CORO7P57737 925 aa13.49□□□□□ -0.25
NLRC3-201ENST00000324659 HERVK_113P62684 666 aa13.49□□□□□ -0.25
NLRC3-201ENST00000324659 AMPD2Q01433 879 aa13.49□□□□□ -0.25
NLRC3-201ENST00000324659 MCTP2Q6DN12 878 aa13.49□□□□□ -0.25
NLRC3-201ENST00000324659 MB21D1Q8N884 522 aa13.49□□□□□ -0.25
NLRC3-201ENST00000324659 CDCA7Q9BWT1 371 aaPredicted RBP13.49□□□□□ -0.25
NLRC3-201ENST00000324659 LACRTQ9GZZ8 138 aa13.49□□□□□ -0.25
NLRC3-201ENST00000324659 MKNK2Q9HBH9 465 aa13.49□□□□□ -0.25
NLRC3-201ENST00000324659 NTSR2O95665 410 aa13.48□□□□□ -0.25
NLRC3-201ENST00000324659 ATP2B2Q01814 1243 aa13.48□□□□□ -0.25
NLRC3-201ENST00000324659 C2orf54Q08AI8 447 aa13.48□□□□□ -0.25
NLRC3-201ENST00000324659 CCDC178Q5BJE1 867 aa13.48□□□□□ -0.25
NLRC3-201ENST00000324659 FBXW10Q5XX13 1052 aa13.48□□□□□ -0.25
NLRC3-201ENST00000324659 MMS22LQ6ZRQ5 1243 aa13.48□□□□□ -0.25
NLRC3-201ENST00000324659 HPS3Q969F9 1004 aa13.48□□□□□ -0.25
NLRC3-201ENST00000324659 JAKMIP2Q96AA8 810 aa13.48□□□□□ -0.25
NLRC3-201ENST00000324659 CPVLQ9H3G5 476 aa13.48□□□□□ -0.25
NLRC3-201ENST00000324659 MINPP1Q9UNW1 487 aa13.48□□□□□ -0.25
NLRC3-201ENST00000324659 CEP83Q9Y592 693 aa13.48□□□□□ -0.25
NLRC3-201ENST00000324659 RCCD1A6NED2 376 aa13.48□□□□□ -0.25
NLRC3-201ENST00000324659 ERLIN2O94905 339 aa13.48□□□□□ -0.25
NLRC3-201ENST00000324659 UBA7P41226 1012 aa13.48□□□□□ -0.25
NLRC3-201ENST00000324659 INF2Q27J81 1249 aa13.48□□□□□ -0.25
NLRC3-201ENST00000324659 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.48□□□□□ -0.25
NLRC3-201ENST00000324659 TOGARAM1Q9Y4F4 1720 aa13.48□□□□□ -0.25
NLRC3-201ENST00000324659 IPO7O95373 1038 aaKnown RBP13.48□□□□□ -0.25
NLRC3-201ENST00000324659 KRT26Q7Z3Y9 468 aa13.48□□□□□ -0.25
NLRC3-201ENST00000324659 TADA2BQ86TJ2 420 aa13.48□□□□□ -0.25
NLRC3-201ENST00000324659 STAG2Q8N3U4 1231 aa13.48□□□□□ -0.25
NLRC3-201ENST00000324659 TMEM60Q9H2L4 133 aa13.48□□□□□ -0.25
NLRC3-201ENST00000324659 RMND1Q9NWS8 449 aa13.48□□□□□ -0.25
NLRC3-201ENST00000324659 MKRN1Q9UHC7 482 aaKnown RBP13.48□□□□□ -0.25
NLRC3-201ENST00000324659 CCDC194A0A1B0GVG4 234 aa13.47□□□□□ -0.25
NLRC3-201ENST00000324659 NKRFO15226 690 aaKnown RBP eCLIP13.47□□□□□ -0.25
NLRC3-201ENST00000324659 MYBL2P10244 700 aa13.47□□□□□ -0.25
NLRC3-201ENST00000324659 IDEP14735 1019 aa13.47□□□□□ -0.25
NLRC3-201ENST00000324659 DNA2P51530 1060 aa13.47□□□□□ -0.25
NLRC3-201ENST00000324659 ACBD3Q9H3P7 528 aa13.47□□□□□ -0.25
NLRC3-201ENST00000324659 STRCP1A6NGW2 1772 aa13.47□□□□□ -0.25
NLRC3-201ENST00000324659 CCT5P48643 541 aa13.47□□□□□ -0.25
NLRC3-201ENST00000324659 WDR59Q6PJI9 974 aa13.47□□□□□ -0.25
NLRC3-201ENST00000324659 HEATR3Q7Z4Q2 680 aa13.47□□□□□ -0.25
NLRC3-201ENST00000324659 CSGALNACT2Q8N6G5 542 aa13.47□□□□□ -0.25
NLRC3-201ENST00000324659 FAM71BQ8TC56 605 aa13.47□□□□□ -0.25
NLRC3-201ENST00000324659 ZNF384Q8TF68 577 aa13.47□□□□□ -0.25
NLRC3-201ENST00000324659 RIMBP2O15034 1052 aa13.46□□□□□ -0.25
NLRC3-201ENST00000324659 MTIF2P46199 727 aaKnown RBP13.46□□□□□ -0.25
NLRC3-201ENST00000324659 TRIM14Q14142 442 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms