RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 SBNO1A3KN83 1393 aa10.61□□□□□ -0.71
COL12A1-201ENST00000322507 ATP8B1O43520 1251 aa10.61□□□□□ -0.71
COL12A1-201ENST00000322507 SERPINB6P35237 376 aa10.61□□□□□ -0.71
COL12A1-201ENST00000322507 STAT2P52630 851 aa10.61□□□□□ -0.71
COL12A1-201ENST00000322507 GEN1Q17RS7 908 aa10.61□□□□□ -0.71
COL12A1-201ENST00000322507 NOC2LQ9Y3T9 749 aaKnown RBP10.61□□□□□ -0.71
COL12A1-201ENST00000322507 MROH5Q6ZUA9 1318 aa10.61□□□□□ -0.71
COL12A1-201ENST00000322507 A0A1B0GVL5 298 aa10.61□□□□□ -0.71
COL12A1-201ENST00000322507 PTGS1P23219 599 aa10.61□□□□□ -0.71
COL12A1-201ENST00000322507 PDE6BP35913 854 aa10.61□□□□□ -0.71
COL12A1-201ENST00000322507 TBC1D8BQ0IIM8 1120 aa10.61□□□□□ -0.71
COL12A1-201ENST00000322507 PANK2Q9BZ23 570 aa10.61□□□□□ -0.71
COL12A1-201ENST00000322507 DIAPH2O60879 1101 aa10.61□□□□□ -0.71
COL12A1-201ENST00000322507 LZTFL1Q9NQ48 299 aa10.61□□□□□ -0.71
COL12A1-201ENST00000322507 PDCLQ13371 301 aa10.61□□□□□ -0.71
COL12A1-201ENST00000322507 ANO1Q5XXA6 986 aa10.61□□□□□ -0.71
COL12A1-201ENST00000322507 ZBTB40Q9NUA8 1239 aa10.61□□□□□ -0.71
COL12A1-201ENST00000322507 GID8Q9NWU2 228 aa10.61□□□□□ -0.71
COL12A1-201ENST00000322507 BAG5Q9UL15 447 aa10.61□□□□□ -0.71
COL12A1-201ENST00000322507 TTC4O95801 387 aa10.61□□□□□ -0.71
COL12A1-201ENST00000322507 MCM7P33993 719 aa10.61□□□□□ -0.71
COL12A1-201ENST00000322507 KRT73Q86Y46 540 aa10.61□□□□□ -0.71
COL12A1-201ENST00000322507 CAPS2Q9BXY5 557 aa10.61□□□□□ -0.71
COL12A1-201ENST00000322507 TPD52L2O43399 206 aaKnown RBP10.61□□□□□ -0.71
COL12A1-201ENST00000322507 ARHGAP4P98171 946 aa10.61□□□□□ -0.71
COL12A1-201ENST00000322507 APOBRQ0VD83 1088 aa10.61□□□□□ -0.71
COL12A1-201ENST00000322507 LRRC8BQ6P9F7 803 aa10.61□□□□□ -0.71
COL12A1-201ENST00000322507 MAGEB6Q8N7X4 407 aa10.61□□□□□ -0.71
COL12A1-201ENST00000322507 LRRIQ3A6PVS8 624 aaPredicted RBP10.61□□□□□ -0.71
COL12A1-201ENST00000322507 TNIP2Q8NFZ5 429 aa10.61□□□□□ -0.71
COL12A1-201ENST00000322507 RTCBQ9Y3I0 505 aaKnown RBP10.61□□□□□ -0.71
COL12A1-201ENST00000322507 CHGBP05060 677 aa10.6□□□□□ -0.71
COL12A1-201ENST00000322507 TNFAIP3P21580 790 aa10.6□□□□□ -0.71
COL12A1-201ENST00000322507 COPB1P53618 953 aaKnown RBP10.6□□□□□ -0.71
COL12A1-201ENST00000322507 SUN1O94901 812 aa10.6□□□□□ -0.71
COL12A1-201ENST00000322507 CCT6AP40227 531 aaKnown RBP10.6□□□□□ -0.71
COL12A1-201ENST00000322507 LIG3P49916 1009 aa10.6□□□□□ -0.71
COL12A1-201ENST00000322507 CDR2Q01850 454 aa10.6□□□□□ -0.71
COL12A1-201ENST00000322507 ASIC2Q16515 512 aa10.6□□□□□ -0.71
COL12A1-201ENST00000322507 NDUFA5Q16718 116 aa10.6□□□□□ -0.71
COL12A1-201ENST00000322507 KRT80Q6KB66 452 aa10.6□□□□□ -0.71
COL12A1-201ENST00000322507 RSBN1LQ6PCB5 846 aaPredicted RBP10.6□□□□□ -0.71
COL12A1-201ENST00000322507 SLC4A1P02730 911 aa10.6□□□□□ -0.71
COL12A1-201ENST00000322507 SLC24A3Q9HC58 644 aa10.6□□□□□ -0.71
COL12A1-201ENST00000322507 HNRNPCL2B2RXH8 293 aa10.6□□□□□ -0.71
COL12A1-201ENST00000322507 HNRNPCL1O60812 293 aaKnown RBP10.6□□□□□ -0.71
COL12A1-201ENST00000322507 PSMC1P62191 440 aaKnown RBP10.6□□□□□ -0.71
COL12A1-201ENST00000322507 KIF23Q02241 960 aaPredicted RBP10.6□□□□□ -0.71
COL12A1-201ENST00000322507 PPP6R3Q5H9R7 873 aaPredicted RBP10.6□□□□□ -0.71
COL12A1-201ENST00000322507 MYO1AQ9UBC5 1043 aa10.6□□□□□ -0.71
COL12A1-201ENST00000322507 DDX41Q9UJV9 622 aaKnown RBP10.6□□□□□ -0.71
COL12A1-201ENST00000322507 CHMLP26374 656 aa10.6□□□□□ -0.71
COL12A1-201ENST00000322507 HOMER3Q9NSC5 361 aa10.6□□□□□ -0.71
COL12A1-201ENST00000322507 MMEP08473 750 aa10.6□□□□□ -0.71
COL12A1-201ENST00000322507 YY1P25490 414 aa10.6□□□□□ -0.71
COL12A1-201ENST00000322507 PARD3BQ8TEW8 1205 aa10.6□□□□□ -0.71
COL12A1-201ENST00000322507 STAMBPL1Q96FJ0 436 aa10.6□□□□□ -0.71
COL12A1-201ENST00000322507 TBKBP1A7MCY6 615 aa10.6□□□□□ -0.71
COL12A1-201ENST00000322507 DCAF17Q5H9S7 520 aaPredicted RBP10.6□□□□□ -0.71
COL12A1-201ENST00000322507 PDZD4Q76G19 769 aaPredicted RBP10.6□□□□□ -0.71
COL12A1-201ENST00000322507 FGFR1OP2Q9NVK5 253 aa10.6□□□□□ -0.71
COL12A1-201ENST00000322507 ANKFY1Q9P2R3 1169 aa10.6□□□□□ -0.71
COL12A1-201ENST00000322507 ARHGEF10O15013 1369 aa10.6□□□□□ -0.71
COL12A1-201ENST00000322507 CEP55Q53EZ4 464 aa10.6□□□□□ -0.71
COL12A1-201ENST00000322507 RBM17Q96I25 401 aaKnown RBP10.6□□□□□ -0.71
COL12A1-201ENST00000322507 PACSIN2Q9UNF0 486 aaPredicted RBP10.6□□□□□ -0.71
COL12A1-201ENST00000322507 BZW2Q9Y6E2 419 aaKnown RBP10.6□□□□□ -0.71
COL12A1-201ENST00000322507 ATP7AQ04656 1500 aa10.6□□□□□ -0.71
COL12A1-201ENST00000322507 CCDC184Q52MB2 194 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 COPS6Q7L5N1 327 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 NRDE2Q9H7Z3 1164 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 KIAA0232Q92628 1395 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 MTRF1O75570 445 aaKnown RBP10.59□□□□□ -0.71
COL12A1-201ENST00000322507 OLR1P78380 273 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 MEIS3Q99687 375 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 ZC3H18Q86VM9 953 aaKnown RBP10.59□□□□□ -0.71
COL12A1-201ENST00000322507 OSBPL9Q96SU4 736 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 NIP7Q9Y221 180 aaKnown RBP eCLIP10.59□□□□□ -0.71
COL12A1-201ENST00000322507 MAFGO15525 162 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 MYL1P05976 194 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 DDIT3P35638 169 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 RAPGEF1Q13905 1077 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 BRD8Q9H0E9 1235 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 CLSTN2Q9H4D0 955 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 DEFA1P59665 94 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 DEFA3P59666 94 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 HHATQ5VTY9 493 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 PLEKHM2Q8IWE5 1019 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 CSGALNACT2Q8N6G5 542 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 VPS37BQ9H9H4 285 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 LMBR1LQ6UX01 489 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 USP26Q9BXU7 913 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 IQSEC3Q9UPP2 1182 aaPredicted RBP10.59□□□□□ -0.71
COL12A1-201ENST00000322507 CYLC2Q14093 348 aaPredicted RBP10.59□□□□□ -0.71
COL12A1-201ENST00000322507 KRT71Q3SY84 523 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 NECAB1Q8N987 351 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 APPBP2Q92624 585 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 OMA1Q96E52 524 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 C19orf60Q96EN9 201 aa10.59□□□□□ -0.71
COL12A1-201ENST00000322507 C6orf203Q9P0P8 240 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms