RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 FAM227BQ96M60 508 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 MAGEF1Q9HAY2 307 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 SBNO1A3KN83 1393 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 CALUO43852 315 aaPredicted RBP7.73□□□□□ -1.17
SMC1A-201ENST00000322213 TRIM37O94972 964 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 CHGBP05060 677 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 MAN1A1P33908 653 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 IL15P40933 162 aaPredicted RBP7.73□□□□□ -1.17
SMC1A-201ENST00000322213 MYO1EQ12965 1108 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 HIBCHQ6NVY1 386 aaPredicted RBP7.73□□□□□ -1.17
SMC1A-201ENST00000322213 ARHGEF18Q6ZSZ5 1173 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 SCYL3Q8IZE3 742 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 CABP5Q9NP86 173 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 WASLO00401 505 aaPredicted RBP7.73□□□□□ -1.17
SMC1A-201ENST00000322213 MMEP08473 750 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 ESRRGP62508 458 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 ADCY2Q08462 1091 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 RBL2Q08999 1139 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.73□□□□□ -1.17
SMC1A-201ENST00000322213 NCAPH2Q6IBW4 605 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 DAAM1Q9Y4D1 1078 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 BEND6Q5SZJ8 279 aaPredicted RBP7.73□□□□□ -1.17
SMC1A-201ENST00000322213 C6orf118Q5T5N4 469 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 JARID2Q92833 1246 aaPredicted RBP7.73□□□□□ -1.17
SMC1A-201ENST00000322213 EPB41L5Q9HCM4 733 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 GMNCA6NCL1 334 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 SNUPNO95149 360 aaKnown RBP7.73□□□□□ -1.17
SMC1A-201ENST00000322213 UAP1Q16222 522 aaPredicted RBP7.73□□□□□ -1.17
SMC1A-201ENST00000322213 KSR2Q6VAB6 950 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 COG1Q8WTW3 980 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 VWDEQ8N2E2 1590 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 PCYT1AP49585 367 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 PRR16Q569H4 304 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 TMED8Q6PL24 325 aaPredicted RBP7.73□□□□□ -1.17
SMC1A-201ENST00000322213 RRAGAQ7L523 313 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 KLHL23Q8NBE8 558 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 YIPF3Q9GZM5 350 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 ATP10BO94823 1461 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 CCNT1O60563 726 aaKnown RBP7.73□□□□□ -1.17
SMC1A-201ENST00000322213 PPP6R2O75170 966 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 PDE6CP51160 858 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 LRRC8CQ8TDW0 803 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 PPP1R1BQ9UD71 204 aaPredicted RBP7.73□□□□□ -1.17
SMC1A-201ENST00000322213 RPAP1Q9BWH6 1393 aaPredicted RBP7.73□□□□□ -1.17
SMC1A-201ENST00000322213 MED23Q9ULK4 1368 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 MAPK13O15264 365 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 STARD3NLO95772 234 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 GRAMD4Q6IC98 578 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 CCDC89Q8N998 374 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 RILPQ96NA2 401 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 DSCC1Q9BVC3 393 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 MAK16Q9BXY0 300 aaKnown RBP7.73□□□□□ -1.17
SMC1A-201ENST00000322213 STAP2Q9UGK3 403 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 ATXN2Q99700 1313 aaKnown RBP7.73□□□□□ -1.17
SMC1A-201ENST00000322213 EFCAB6Q5THR3 1501 aa7.73□□□□□ -1.17
SMC1A-201ENST00000322213 ENC1O14682 589 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 LMNB1P20700 586 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 NRBF2Q96F24 287 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 ARHGAP42A6NI28 874 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 TRAF5O00463 557 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 ITIH3Q06033 890 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 SCRN1Q12765 414 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 USP28Q96RU2 1077 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 IQSEC3Q9UPP2 1182 aaPredicted RBP7.72□□□□□ -1.17
SMC1A-201ENST00000322213 TSPY2A6NKD2 308 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 HEXIM1O94992 359 aaKnown RBP7.72□□□□□ -1.17
SMC1A-201ENST00000322213 PSEN1P49768 467 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 BABAM1Q9NWV8 329 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.72□□□□□ -1.17
SMC1A-201ENST00000322213 NDUFA10O95299 355 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 CDR2Q01850 454 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 ICA1Q05084 483 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 ANKRD27Q96NW4 1050 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 KRT12Q99456 494 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 SCINQ9Y6U3 715 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 IQSEC2Q5JU85 1478 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 BAG2O95816 211 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 ABCD1P33897 745 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 NLRP14Q86W24 1093 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 ZNF444Q8N0Y2 327 aaPredicted RBP7.72□□□□□ -1.17
SMC1A-201ENST00000322213 MAIP1Q8WWC4 291 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 PLAAQ9Y263 795 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 AMOTL2Q9Y2J4 779 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 MAP1BP46821 2468 aaKnown RBP7.72□□□□□ -1.17
SMC1A-201ENST00000322213 PGRMC1O00264 195 aaKnown RBP7.72□□□□□ -1.17
SMC1A-201ENST00000322213 C16orf87Q6PH81 154 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 OSCARQ8IYS5 282 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 ZCCHC17Q9NP64 241 aaKnown RBP7.72□□□□□ -1.17
SMC1A-201ENST00000322213 STOML1Q9UBI4 398 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 USP27XA6NNY8 438 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 HNRNPCP07910 306 aaKnown RBP eCLIP7.72□□□□□ -1.17
SMC1A-201ENST00000322213 LGSNQ5TDP6 509 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 PDCD7Q8N8D1 485 aaKnown RBP7.72□□□□□ -1.17
SMC1A-201ENST00000322213 HNRNPLLQ8WVV9 542 aaKnown RBP7.72□□□□□ -1.17
SMC1A-201ENST00000322213 USP6NLQ92738 828 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 RWDD2AQ9UIY3 292 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 BCRP11274 1271 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 KLHL30Q0D2K2 578 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 NYAP1Q6ZVC0 841 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 PACS2Q86VP3 889 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms