RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 STX1BP61266 288 aa18.4■□□□□ 0.54
SMCHD1-201ENST00000320876 SLMAPQ14BN4 828 aa18.4■□□□□ 0.54
SMCHD1-201ENST00000320876 KRT80Q6KB66 452 aa18.4■□□□□ 0.54
SMCHD1-201ENST00000320876 ST7Q9NRC1 585 aa18.4■□□□□ 0.54
SMCHD1-201ENST00000320876 EPN1Q9Y6I3 576 aaPredicted RBP18.4■□□□□ 0.54
SMCHD1-201ENST00000320876 NELFCDQ8IXH7 590 aa18.4■□□□□ 0.54
SMCHD1-201ENST00000320876 ALS2CLQ60I27 953 aa18.4■□□□□ 0.54
SMCHD1-201ENST00000320876 FAM135BQ49AJ0 1406 aa18.4■□□□□ 0.54
SMCHD1-201ENST00000320876 CYP2J2P51589 502 aa18.4■□□□□ 0.54
SMCHD1-201ENST00000320876 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.4■□□□□ 0.54
SMCHD1-201ENST00000320876 DPH5Q9H2P9 285 aa18.4■□□□□ 0.54
SMCHD1-201ENST00000320876 GPHNQ9NQX3 736 aaPredicted RBP18.4■□□□□ 0.54
SMCHD1-201ENST00000320876 NSFL1CQ9UNZ2 370 aaKnown RBP18.4■□□□□ 0.54
SMCHD1-201ENST00000320876 NOD1Q9Y239 953 aa18.4■□□□□ 0.54
SMCHD1-201ENST00000320876 GAS7O60861 476 aa18.39■□□□□ 0.54
SMCHD1-201ENST00000320876 TAF11Q15544 211 aa18.39■□□□□ 0.54
SMCHD1-201ENST00000320876 YY1AP1Q9H869 796 aa18.39■□□□□ 0.54
SMCHD1-201ENST00000320876 PLB1Q6P1J6 1458 aa18.39■□□□□ 0.54
SMCHD1-201ENST00000320876 BFSP1Q12934 665 aa18.39■□□□□ 0.54
SMCHD1-201ENST00000320876 M0QZ92 97 aa18.39■□□□□ 0.53
SMCHD1-201ENST00000320876 MYCLP12524 364 aaPredicted RBP18.39■□□□□ 0.53
SMCHD1-201ENST00000320876 FAM227BQ96M60 508 aa18.39■□□□□ 0.53
SMCHD1-201ENST00000320876 TSC22D3Q99576 134 aa18.39■□□□□ 0.53
SMCHD1-201ENST00000320876 TRIM15Q9C019 465 aa18.39■□□□□ 0.53
SMCHD1-201ENST00000320876 JRKLQ9Y4A0 524 aa18.39■□□□□ 0.53
SMCHD1-201ENST00000320876 PANK4Q9NVE7 773 aa18.39■□□□□ 0.53
SMCHD1-201ENST00000320876 CDC23Q9UJX2 597 aa18.39■□□□□ 0.53
SMCHD1-201ENST00000320876 YTHDC2Q9H6S0 1430 aaKnown RBP18.39■□□□□ 0.53
SMCHD1-201ENST00000320876 YARSP54577 528 aaKnown RBP18.39■□□□□ 0.53
SMCHD1-201ENST00000320876 USH1GQ495M9 461 aa18.39■□□□□ 0.53
SMCHD1-201ENST00000320876 KBTBD3Q8NAB2 608 aa18.39■□□□□ 0.53
SMCHD1-201ENST00000320876 DSCC1Q9BVC3 393 aa18.39■□□□□ 0.53
SMCHD1-201ENST00000320876 RAPH1Q70E73 1250 aa18.39■□□□□ 0.53
SMCHD1-201ENST00000320876 RGS12O14924 1447 aa18.39■□□□□ 0.53
SMCHD1-201ENST00000320876 ZBTB7BO15156 539 aaPredicted RBP18.39■□□□□ 0.53
SMCHD1-201ENST00000320876 MCTP2Q6DN12 878 aa18.39■□□□□ 0.53
SMCHD1-201ENST00000320876 XAGE2Q96GT9 111 aa18.39■□□□□ 0.53
SMCHD1-201ENST00000320876 TM6SF1Q9BZW5 370 aa18.39■□□□□ 0.53
SMCHD1-201ENST00000320876 ANAPC5Q9UJX4 755 aa18.39■□□□□ 0.53
SMCHD1-201ENST00000320876 PACSIN2Q9UNF0 486 aaPredicted RBP18.39■□□□□ 0.53
SMCHD1-201ENST00000320876 SGK1O00141 431 aa18.38■□□□□ 0.53
SMCHD1-201ENST00000320876 CTNND1O60716 968 aaKnown RBP18.38■□□□□ 0.53
SMCHD1-201ENST00000320876 OATP04181 439 aa18.38■□□□□ 0.53
SMCHD1-201ENST00000320876 TRIM11Q96F44 468 aa18.38■□□□□ 0.53
SMCHD1-201ENST00000320876 FGFR1OP2Q9NVK5 253 aa18.38■□□□□ 0.53
SMCHD1-201ENST00000320876 DNMT1P26358 1616 aaKnown RBP18.38■□□□□ 0.53
SMCHD1-201ENST00000320876 CAPN9O14815 690 aa18.38■□□□□ 0.53
SMCHD1-201ENST00000320876 BRD1O95696 1058 aa18.38■□□□□ 0.53
SMCHD1-201ENST00000320876 LRMPQ12912 555 aa18.38■□□□□ 0.53
SMCHD1-201ENST00000320876 TPH2Q8IWU9 490 aa18.38■□□□□ 0.53
SMCHD1-201ENST00000320876 ZMYM6O95789 1325 aa18.38■□□□□ 0.53
SMCHD1-201ENST00000320876 ITGA6P23229 1130 aa18.38■□□□□ 0.53
SMCHD1-201ENST00000320876 CADPS2Q86UW7 1296 aa18.38■□□□□ 0.53
SMCHD1-201ENST00000320876 RTCBQ9Y3I0 505 aaKnown RBP18.38■□□□□ 0.53
SMCHD1-201ENST00000320876 POLR2BP30876 1174 aaKnown RBP18.38■□□□□ 0.53
SMCHD1-201ENST00000320876 C16orf87Q6PH81 154 aa18.38■□□□□ 0.53
SMCHD1-201ENST00000320876 SLC17A8Q8NDX2 589 aa18.38■□□□□ 0.53
SMCHD1-201ENST00000320876 IL1RL1Q01638 556 aa18.38■□□□□ 0.53
SMCHD1-201ENST00000320876 ANKRD35Q8N283 1001 aa18.38■□□□□ 0.53
SMCHD1-201ENST00000320876 C10orf76Q5T2E6 689 aa18.38■□□□□ 0.53
SMCHD1-201ENST00000320876 CEP19Q96LK0 163 aa18.38■□□□□ 0.53
SMCHD1-201ENST00000320876 KIFC3Q9BVG8 833 aa18.38■□□□□ 0.53
SMCHD1-201ENST00000320876 AATFQ9NY61 560 aaKnown RBP eCLIP18.38■□□□□ 0.532e-8■■■■□ 22.6
SMCHD1-201ENST00000320876 VPS54Q9P1Q0 977 aa18.38■□□□□ 0.53
SMCHD1-201ENST00000320876 SBNO1A3KN83 1393 aa18.38■□□□□ 0.53
SMCHD1-201ENST00000320876 KIF24Q5T7B8 1368 aa18.38■□□□□ 0.53
SMCHD1-201ENST00000320876 SAT1P21673 171 aa18.37■□□□□ 0.53
SMCHD1-201ENST00000320876 YWHAGP61981 247 aaKnown RBP eCLIP18.37■□□□□ 0.53
SMCHD1-201ENST00000320876 PPP2R5AQ15172 486 aa18.37■□□□□ 0.53
SMCHD1-201ENST00000320876 FNBP4Q8N3X1 1017 aaPredicted RBP18.37■□□□□ 0.53
SMCHD1-201ENST00000320876 METTL14Q9HCE5 456 aaKnown RBP18.37■□□□□ 0.53
SMCHD1-201ENST00000320876 SMYD2Q9NRG4 433 aa18.37■□□□□ 0.53
SMCHD1-201ENST00000320876 MROH5Q6ZUA9 1318 aa18.37■□□□□ 0.53
SMCHD1-201ENST00000320876 EYA2O00167 538 aa18.37■□□□□ 0.53
SMCHD1-201ENST00000320876 DCAF5Q96JK2 942 aa18.37■□□□□ 0.53
SMCHD1-201ENST00000320876 A6NJR5 290 aa18.37■□□□□ 0.53
SMCHD1-201ENST00000320876 CAPN12Q6ZSI9 719 aa18.37■□□□□ 0.53
SMCHD1-201ENST00000320876 FAM8A1Q9UBU6 413 aa18.37■□□□□ 0.53
SMCHD1-201ENST00000320876 EHHADHQ08426 723 aa18.37■□□□□ 0.53
SMCHD1-201ENST00000320876 METTL22Q9BUU2 404 aaPredicted RBP18.37■□□□□ 0.53
SMCHD1-201ENST00000320876 RPN1P04843 607 aaKnown RBP18.37■□□□□ 0.53
SMCHD1-201ENST00000320876 BABAM1Q9NWV8 329 aa18.37■□□□□ 0.53
SMCHD1-201ENST00000320876 JAG2Q9Y219 1238 aa18.37■□□□□ 0.53
SMCHD1-201ENST00000320876 GPC4O75487 556 aa18.37■□□□□ 0.53
SMCHD1-201ENST00000320876 GALNT17Q6IS24 598 aa18.37■□□□□ 0.53
SMCHD1-201ENST00000320876 HOOK2Q96ED9 719 aa18.37■□□□□ 0.53
SMCHD1-201ENST00000320876 ZNF274Q96GC6 653 aaPredicted RBP18.37■□□□□ 0.53
SMCHD1-201ENST00000320876 COL17A1Q9UMD9 1497 aaPredicted RBP18.37■□□□□ 0.53
SMCHD1-201ENST00000320876 E7EWF7 191 aa18.37■□□□□ 0.53
SMCHD1-201ENST00000320876 GSTA4O15217 222 aa18.37■□□□□ 0.53
SMCHD1-201ENST00000320876 KCNJ14Q9UNX9 436 aa18.37■□□□□ 0.53
SMCHD1-201ENST00000320876 ATICP31939 592 aa18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 MYSM1Q5VVJ2 828 aa18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 TTBK2Q6IQ55 1244 aa18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 SKA2Q8WVK7 121 aaPredicted RBP18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 POLR3CQ9BUI4 534 aaPredicted RBP18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 TRPA1O75762 1119 aa18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 NSFP46459 744 aaKnown RBP18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 POLE2P56282 527 aa18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 ME3Q16798 604 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms