RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 PARP2Q9UGN5 583 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 MOCS3O95396 460 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 KRT81Q14533 505 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 E2F5Q15329 346 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 SH2D4BQ5SQS7 431 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 SPTLC3Q9NUV7 552 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 KIAA1024Q9UPX6 916 aa9.74□□□□□ -0.85
SSBP2-201ENST00000320672 ABCC1P33527 1531 aa9.73□□□□□ -0.85
SSBP2-201ENST00000320672 RFC1P35251 1148 aaPredicted RBP9.73□□□□□ -0.85
SSBP2-201ENST00000320672 CLNS1AP54105 237 aaKnown RBP9.73□□□□□ -0.85
SSBP2-201ENST00000320672 CERKLQ49MI3 558 aaPredicted RBP9.73□□□□□ -0.85
SSBP2-201ENST00000320672 OTUD6AQ7L8S5 288 aa9.73□□□□□ -0.85
SSBP2-201ENST00000320672 CCDC117Q8IWD4 279 aaPredicted RBP9.73□□□□□ -0.85
SSBP2-201ENST00000320672 GSPT2Q8IYD1 628 aaKnown RBP9.73□□□□□ -0.85
SSBP2-201ENST00000320672 CASP14P31944 242 aa9.73□□□□□ -0.85
SSBP2-201ENST00000320672 TCIRG1Q13488 830 aa9.73□□□□□ -0.85
SSBP2-201ENST00000320672 RYBPQ8N488 228 aaPredicted RBP9.73□□□□□ -0.85
SSBP2-201ENST00000320672 NXF1Q9UBU9 619 aaKnown RBP9.73□□□□□ -0.85
SSBP2-201ENST00000320672 SEPT9Q9UHD8 586 aaPredicted RBP9.73□□□□□ -0.85
SSBP2-201ENST00000320672 TACC3Q9Y6A5 838 aa9.73□□□□□ -0.85
SSBP2-201ENST00000320672 CCDC13Q8IYE1 715 aa9.73□□□□□ -0.85
SSBP2-201ENST00000320672 LCORLQ8N3X6 602 aa9.73□□□□□ -0.85
SSBP2-201ENST00000320672 PCDHA12Q9UN75 941 aa9.73□□□□□ -0.85
SSBP2-201ENST00000320672 MTMR6Q9Y217 621 aa9.73□□□□□ -0.85
SSBP2-201ENST00000320672 ASXL1Q8IXJ9 1541 aa9.73□□□□□ -0.85
SSBP2-201ENST00000320672 ANO4Q32M45 955 aa9.73□□□□□ -0.85
SSBP2-201ENST00000320672 LIN9Q5TKA1 542 aa9.73□□□□□ -0.85
SSBP2-201ENST00000320672 GBP6Q6ZN66 633 aa9.73□□□□□ -0.85
SSBP2-201ENST00000320672 NLRX1Q86UT6 975 aa9.73□□□□□ -0.85
SSBP2-201ENST00000320672 CDC26Q8NHZ8 85 aa9.73□□□□□ -0.85
SSBP2-201ENST00000320672 ERO1AQ96HE7 468 aa9.73□□□□□ -0.85
SSBP2-201ENST00000320672 HYOU1Q9Y4L1 999 aa9.73□□□□□ -0.85
SSBP2-201ENST00000320672 KDM2BQ8NHM5 1336 aa9.73□□□□□ -0.85
SSBP2-201ENST00000320672 PIK3R2O00459 728 aa9.73□□□□□ -0.85
SSBP2-201ENST00000320672 KRIT1O00522 736 aa9.73□□□□□ -0.85
SSBP2-201ENST00000320672 ATP2A2P16615 1042 aaKnown RBP9.73□□□□□ -0.85
SSBP2-201ENST00000320672 ARMCX5Q6P1M9 558 aa9.73□□□□□ -0.85
SSBP2-201ENST00000320672 BLIDQ8IZY5 108 aa9.73□□□□□ -0.85
SSBP2-201ENST00000320672 CCDC89Q8N998 374 aa9.73□□□□□ -0.85
SSBP2-201ENST00000320672 CABS1Q96KC9 395 aa9.73□□□□□ -0.85
SSBP2-201ENST00000320672 CTTNQ14247 550 aaKnown RBP9.73□□□□□ -0.85
SSBP2-201ENST00000320672 EXT2Q93063 718 aa9.73□□□□□ -0.85
SSBP2-201ENST00000320672 SH2D3AQ9BRG2 576 aa9.73□□□□□ -0.85
SSBP2-201ENST00000320672 CAPN9O14815 690 aa9.72□□□□□ -0.85
SSBP2-201ENST00000320672 NMT2O60551 498 aa9.72□□□□□ -0.85
SSBP2-201ENST00000320672 CIB2O75838 187 aa9.72□□□□□ -0.85
SSBP2-201ENST00000320672 RCN2Q14257 317 aa9.72□□□□□ -0.85
SSBP2-201ENST00000320672 MCUR1Q96AQ8 359 aa9.72□□□□□ -0.85
SSBP2-201ENST00000320672 DDX25Q9UHL0 483 aaKnown RBP9.72□□□□□ -0.85
SSBP2-201ENST00000320672 INPP5BP32019 993 aa9.72□□□□□ -0.85
SSBP2-201ENST00000320672 PRPHP41219 470 aa9.72□□□□□ -0.85
SSBP2-201ENST00000320672 FAM196AQ6ZSG2 479 aa9.72□□□□□ -0.85
SSBP2-201ENST00000320672 FANCBQ8NB91 859 aa9.72□□□□□ -0.85
SSBP2-201ENST00000320672 GSDMBQ8TAX9 411 aa9.72□□□□□ -0.85
SSBP2-201ENST00000320672 GDAP1Q8TB36 358 aa9.72□□□□□ -0.85
SSBP2-201ENST00000320672 AP1M1Q9BXS5 423 aa9.72□□□□□ -0.85
SSBP2-201ENST00000320672 SAMSN1Q9NSI8 373 aaKnown RBP9.72□□□□□ -0.85
SSBP2-201ENST00000320672 UHRF1BP1Q6BDS2 1440 aa9.72□□□□□ -0.85
SSBP2-201ENST00000320672 RBL2Q08999 1139 aa9.72□□□□□ -0.85
SSBP2-201ENST00000320672 HABP4Q5JVS0 413 aaKnown RBP9.72□□□□□ -0.85
SSBP2-201ENST00000320672 REXO1Q8N1G1 1221 aaKnown RBP9.72□□□□□ -0.85
SSBP2-201ENST00000320672 IQGAP2Q13576 1575 aa9.72□□□□□ -0.85
SSBP2-201ENST00000320672 CTNNA1P35221 906 aaKnown RBP9.72□□□□□ -0.85
SSBP2-201ENST00000320672 PRAG1Q86YV5 1406 aa9.72□□□□□ -0.85
SSBP2-201ENST00000320672 NAA30Q147X3 362 aaPredicted RBP9.72□□□□□ -0.85
SSBP2-201ENST00000320672 SLFN13Q68D06 897 aa9.72□□□□□ -0.85
SSBP2-201ENST00000320672 SLC35F6Q8N357 371 aa9.72□□□□□ -0.85
SSBP2-201ENST00000320672 RSAD2Q8WXG1 361 aa9.72□□□□□ -0.85
SSBP2-201ENST00000320672 USH1CQ9Y6N9 552 aa9.72□□□□□ -0.85
SSBP2-201ENST00000320672 PEX19P40855 299 aa9.72□□□□□ -0.85
SSBP2-201ENST00000320672 BRD3Q15059 726 aa9.72□□□□□ -0.85
SSBP2-201ENST00000320672 CDO1Q16878 200 aa9.72□□□□□ -0.85
SSBP2-201ENST00000320672 DPCR1Q3MIW9 517 aa9.72□□□□□ -0.85
SSBP2-201ENST00000320672 CYP4F22Q6NT55 531 aa9.72□□□□□ -0.85
SSBP2-201ENST00000320672 CAPN7Q9Y6W3 813 aa9.72□□□□□ -0.85
SSBP2-201ENST00000320672 YTHDC2Q9H6S0 1430 aaKnown RBP9.72□□□□□ -0.85
SSBP2-201ENST00000320672 GIGYF1O75420 1035 aaPredicted RBP9.72□□□□□ -0.85
SSBP2-201ENST00000320672 CYP27A1Q02318 531 aa9.72□□□□□ -0.85
SSBP2-201ENST00000320672 ADAM9Q13443 819 aa9.72□□□□□ -0.85
SSBP2-201ENST00000320672 MTERF2Q49AM1 385 aa9.72□□□□□ -0.85
SSBP2-201ENST00000320672 DACT3Q96B18 629 aaPredicted RBP9.72□□□□□ -0.85
SSBP2-201ENST00000320672 PPP2R2CQ9Y2T4 447 aa9.72□□□□□ -0.85
SSBP2-201ENST00000320672 PDIA3P30101 505 aaKnown RBP9.71□□□□□ -0.85
SSBP2-201ENST00000320672 HAUS3Q68CZ6 603 aa9.71□□□□□ -0.85
SSBP2-201ENST00000320672 KIF9Q9HAQ2 790 aa9.71□□□□□ -0.85
SSBP2-201ENST00000320672 FAM8A1Q9UBU6 413 aa9.71□□□□□ -0.85
SSBP2-201ENST00000320672 CCPG1Q9ULG6 757 aa9.71□□□□□ -0.85
SSBP2-201ENST00000320672 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.71□□□□□ -0.85
SSBP2-201ENST00000320672 NUP153P49790 1475 aaKnown RBP9.71□□□□□ -0.85
SSBP2-201ENST00000320672 SOWAHDA6NJG2 315 aa9.71□□□□□ -0.85
SSBP2-201ENST00000320672 H7C0C1 242 aa9.71□□□□□ -0.85
SSBP2-201ENST00000320672 GAS8O95995 478 aa9.71□□□□□ -0.85
SSBP2-201ENST00000320672 ATP5OP48047 213 aa9.71□□□□□ -0.85
SSBP2-201ENST00000320672 LACTBP83111 547 aaPredicted RBP9.71□□□□□ -0.85
SSBP2-201ENST00000320672 RNF217Q8TC41 542 aa9.71□□□□□ -0.85
SSBP2-201ENST00000320672 RIOK1Q9BRS2 568 aaKnown RBP9.71□□□□□ -0.85
SSBP2-201ENST00000320672 GUCY2DQ02846 1103 aa9.71□□□□□ -0.85
SSBP2-201ENST00000320672 TMTC4Q5T4D3 741 aa9.71□□□□□ -0.85
SSBP2-201ENST00000320672 LRRC45Q96CN5 670 aa9.71□□□□□ -0.85
SSBP2-201ENST00000320672 DBNLQ9UJU6 430 aaKnown RBP9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms