RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 RHOBTB3O94955 611 aa15.57■□□□□ 0.08
ATG4C-201ENST00000317868 ORC2Q13416 577 aaPredicted RBP15.57■□□□□ 0.08
ATG4C-201ENST00000317868 FILIP1LQ4L180 1135 aa15.57■□□□□ 0.08
ATG4C-201ENST00000317868 RBM17Q96I25 401 aaKnown RBP15.57■□□□□ 0.08
ATG4C-201ENST00000317868 MAGEF1Q9HAY2 307 aa15.57■□□□□ 0.08
ATG4C-201ENST00000317868 POLLQ9UGP5 575 aa15.57■□□□□ 0.08
ATG4C-201ENST00000317868 GDAQ9Y2T3 454 aa15.57■□□□□ 0.08
ATG4C-201ENST00000317868 CDC25AP30304 524 aa15.56■□□□□ 0.08
ATG4C-201ENST00000317868 FXR1P51114 621 aaKnown RBP eCLIP15.56■□□□□ 0.08
ATG4C-201ENST00000317868 COPB1P53618 953 aaKnown RBP15.56■□□□□ 0.08
ATG4C-201ENST00000317868 HEATR3Q7Z4Q2 680 aa15.56■□□□□ 0.08
ATG4C-201ENST00000317868 CNGA4Q8IV77 575 aa15.56■□□□□ 0.08
ATG4C-201ENST00000317868 TBC1D16Q8TBP0 767 aa15.56■□□□□ 0.08
ATG4C-201ENST00000317868 AK8Q96MA6 479 aa15.56■□□□□ 0.08
ATG4C-201ENST00000317868 CUEDC2Q9H467 287 aa15.56■□□□□ 0.08
ATG4C-201ENST00000317868 EP400Q96L91 3159 aa15.56■□□□□ 0.08
ATG4C-201ENST00000317868 EFCAB8A8MWE9 144 aa15.56■□□□□ 0.08
ATG4C-201ENST00000317868 BBOX1O75936 387 aa15.56■□□□□ 0.08
ATG4C-201ENST00000317868 GABPAQ06546 454 aa15.56■□□□□ 0.08
ATG4C-201ENST00000317868 TEX11Q8IYF3 940 aa15.56■□□□□ 0.08
ATG4C-201ENST00000317868 TBC1D22AQ8WUA7 517 aa15.56■□□□□ 0.08
ATG4C-201ENST00000317868 CRAMP1Q96RY5 1269 aa15.56■□□□□ 0.08
ATG4C-201ENST00000317868 RIOX1Q9H6W3 641 aa15.56■□□□□ 0.08
ATG4C-201ENST00000317868 ATAD5Q96QE3 1844 aa15.56■□□□□ 0.08
ATG4C-201ENST00000317868 IGKV6D-41A0A0C4DH26 115 aa15.55■□□□□ 0.08
ATG4C-201ENST00000317868 PP2D1A8MPX8 630 aa15.55■□□□□ 0.08
ATG4C-201ENST00000317868 NPHP1O15259 732 aa15.55■□□□□ 0.08
ATG4C-201ENST00000317868 SERPINB2P05120 415 aa15.55■□□□□ 0.08
ATG4C-201ENST00000317868 CCDC175P0C221 793 aa15.55■□□□□ 0.08
ATG4C-201ENST00000317868 CASP14P31944 242 aa15.55■□□□□ 0.08
ATG4C-201ENST00000317868 ST5P78524 1137 aa15.55■□□□□ 0.08
ATG4C-201ENST00000317868 KRT25Q7Z3Z0 450 aa15.55■□□□□ 0.08
ATG4C-201ENST00000317868 STX8Q9UNK0 236 aa15.55■□□□□ 0.08
ATG4C-201ENST00000317868 KCNJ18B7U540 433 aa15.55■□□□□ 0.08
ATG4C-201ENST00000317868 H7C1D1 291 aa15.55■□□□□ 0.08
ATG4C-201ENST00000317868 PARP1P09874 1014 aaKnown RBP15.55■□□□□ 0.08
ATG4C-201ENST00000317868 TRIM14Q14142 442 aa15.55■□□□□ 0.08
ATG4C-201ENST00000317868 KCNJ12Q14500 433 aa15.55■□□□□ 0.08
ATG4C-201ENST00000317868 UTP14CQ5TAP6 766 aaKnown RBP15.55■□□□□ 0.08
ATG4C-201ENST00000317868 GIMAP8Q8ND71 665 aaPredicted RBP15.55■□□□□ 0.08
ATG4C-201ENST00000317868 CCDC12Q8WUD4 166 aaPredicted RBP15.55■□□□□ 0.08
ATG4C-201ENST00000317868 CEP95Q96GE4 821 aa15.55■□□□□ 0.08
ATG4C-201ENST00000317868 DESI2Q9BSY9 194 aa15.55■□□□□ 0.08
ATG4C-201ENST00000317868 hCG_1984214I3L0E3 225 aa15.54■□□□□ 0.08
ATG4C-201ENST00000317868 GOLGA8HP0CJ92 632 aa15.54■□□□□ 0.08
ATG4C-201ENST00000317868 SNHG28P0DPA3 235 aa15.54■□□□□ 0.08
ATG4C-201ENST00000317868 PPFIBP1Q86W92 1011 aa15.54■□□□□ 0.08
ATG4C-201ENST00000317868 ZNF713Q8N859 430 aaPredicted RBP15.54■□□□□ 0.08
ATG4C-201ENST00000317868 DDR1Q08345 913 aa15.54■□□□□ 0.08
ATG4C-201ENST00000317868 DMTNQ08495 405 aa15.54■□□□□ 0.08
ATG4C-201ENST00000317868 COBLL1Q53SF7 1204 aa15.54■□□□□ 0.08
ATG4C-201ENST00000317868 MFSD14BQ5SR56 506 aa15.54■□□□□ 0.08
ATG4C-201ENST00000317868 RSRC2Q7L4I2 434 aaKnown RBP15.54■□□□□ 0.08
ATG4C-201ENST00000317868 SLF2Q8IX21 1173 aa15.54■□□□□ 0.08
ATG4C-201ENST00000317868 ABHD10Q9NUJ1 306 aa15.54■□□□□ 0.08
ATG4C-201ENST00000317868 RNF225M0QZC1 329 aaPredicted RBP15.54■□□□□ 0.08
ATG4C-201ENST00000317868 POLRMTO00411 1230 aaKnown RBP15.54■□□□□ 0.08
ATG4C-201ENST00000317868 CASQ1P31415 396 aa15.54■□□□□ 0.08
ATG4C-201ENST00000317868 PMS1P54277 932 aaKnown RBP15.54■□□□□ 0.08
ATG4C-201ENST00000317868 ERVK-24P63145 666 aa15.54■□□□□ 0.08
ATG4C-201ENST00000317868 ZNF507Q8TCN5 953 aa15.54■□□□□ 0.08
ATG4C-201ENST00000317868 THAP9Q9H5L6 903 aa15.54■□□□□ 0.08
ATG4C-201ENST00000317868 MYO3BQ8WXR4 1341 aa15.53■□□□□ 0.08
ATG4C-201ENST00000317868 UBAP1LF5GYI3 381 aa15.53■□□□□ 0.08
ATG4C-201ENST00000317868 URI1O94763 535 aaPredicted RBP15.53■□□□□ 0.08
ATG4C-201ENST00000317868 OR52Z1P0C646 297 aa15.53■□□□□ 0.08
ATG4C-201ENST00000317868 GNG11P61952 73 aa15.53■□□□□ 0.08
ATG4C-201ENST00000317868 DAGLAQ9Y4D2 1042 aa15.53■□□□□ 0.08
ATG4C-201ENST00000317868 EDIL3O43854 480 aa15.53■□□□□ 0.08
ATG4C-201ENST00000317868 COBLO75128 1261 aa15.53■□□□□ 0.08
ATG4C-201ENST00000317868 ZRANB2O95218 330 aaKnown RBP eCLIP15.53■□□□□ 0.08
ATG4C-201ENST00000317868 CCT6AP40227 531 aaKnown RBP15.53■□□□□ 0.08
ATG4C-201ENST00000317868 CLCN6P51797 869 aa15.53■□□□□ 0.08
ATG4C-201ENST00000317868 NONOQ15233 471 aaKnown RBP eCLIP15.53■□□□□ 0.08
ATG4C-201ENST00000317868 TTI2Q6NXR4 508 aa15.53■□□□□ 0.08
ATG4C-201ENST00000317868 USP17L2Q6R6M4 530 aa15.53■□□□□ 0.08
ATG4C-201ENST00000317868 TMC4Q7Z404 712 aa15.53■□□□□ 0.08
ATG4C-201ENST00000317868 ZMYND15Q9H091 742 aa15.53■□□□□ 0.08
ATG4C-201ENST00000317868 CPVLQ9H3G5 476 aa15.53■□□□□ 0.08
ATG4C-201ENST00000317868 SUGT1Q9Y2Z0 365 aa15.53■□□□□ 0.08
ATG4C-201ENST00000317868 A0A1W2PQC6 194 aa15.52■□□□□ 0.08
ATG4C-201ENST00000317868 PDHBP11177 359 aa15.52■□□□□ 0.08
ATG4C-201ENST00000317868 GNA11P29992 359 aa15.52■□□□□ 0.08
ATG4C-201ENST00000317868 NAPAP54920 295 aa15.52■□□□□ 0.08
ATG4C-201ENST00000317868 SLC27A3Q5K4L6 730 aa15.52■□□□□ 0.08
ATG4C-201ENST00000317868 C7orf25Q9BPX7 421 aa15.52■□□□□ 0.08
ATG4C-201ENST00000317868 MMTAG2Q9BU76 263 aaKnown RBP15.52■□□□□ 0.08
ATG4C-201ENST00000317868 CARD6Q9BX69 1037 aa15.52■□□□□ 0.08
ATG4C-201ENST00000317868 C6orf50Q9HD87 102 aa15.52■□□□□ 0.08
ATG4C-201ENST00000317868 TRIM49BA6NDI0 452 aa15.52■□□□□ 0.07
ATG4C-201ENST00000317868 N4BP3O15049 544 aa15.52■□□□□ 0.07
ATG4C-201ENST00000317868 EEF1GP26641 437 aaKnown RBP15.52■□□□□ 0.07
ATG4C-201ENST00000317868 ARHGAP29Q52LW3 1261 aa15.52■□□□□ 0.07
ATG4C-201ENST00000317868 NEK8Q86SG6 692 aa15.52■□□□□ 0.07
ATG4C-201ENST00000317868 TMTC1Q8IUR5 882 aa15.52■□□□□ 0.07
ATG4C-201ENST00000317868 RRP36Q96EU6 259 aaKnown RBP15.52■□□□□ 0.07
ATG4C-201ENST00000317868 TAB2Q9NYJ8 693 aa15.52■□□□□ 0.07
ATG4C-201ENST00000317868 A0A0U1RQJ8 604 aa15.51■□□□□ 0.07
ATG4C-201ENST00000317868 SMCO2A6NFE2 343 aa15.51■□□□□ 0.07
ATG4C-201ENST00000317868 LGALS16A8MUM7 142 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms