RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 UPF1Q92900 1129 aaKnown RBP eCLIP8.18□□□□□ -1.1
NPHP1-201ENST00000316534 GPKOWQ92917 476 aaPredicted RBP eCLIP8.18□□□□□ -1.1
NPHP1-201ENST00000316534 DNAJC25Q9H1X3 360 aa8.18□□□□□ -1.1
NPHP1-201ENST00000316534 TDRD3Q9H7E2 651 aaKnown RBP8.18□□□□□ -1.1
NPHP1-201ENST00000316534 C6orf50Q9HD87 102 aa8.18□□□□□ -1.1
NPHP1-201ENST00000316534 KBTBD4Q9NVX7 518 aa8.18□□□□□ -1.1
NPHP1-201ENST00000316534 FAM13BQ9NYF5 915 aa8.18□□□□□ -1.1
NPHP1-201ENST00000316534 MAN1B1Q9UKM7 699 aa8.18□□□□□ -1.1
NPHP1-201ENST00000316534 HDAC9Q9UKV0 1011 aa8.18□□□□□ -1.1
NPHP1-201ENST00000316534 PDIA5Q14554 519 aa8.18□□□□□ -1.1
NPHP1-201ENST00000316534 POSTNQ15063 836 aa8.18□□□□□ -1.1
NPHP1-201ENST00000316534 DPCR1Q3MIW9 517 aa8.18□□□□□ -1.1
NPHP1-201ENST00000316534 UBE2Q2Q8WVN8 375 aa8.18□□□□□ -1.1
NPHP1-201ENST00000316534 SYMPKQ92797 1274 aaKnown RBP8.18□□□□□ -1.1
NPHP1-201ENST00000316534 PAGE5Q96GU1 130 aa8.18□□□□□ -1.1
NPHP1-201ENST00000316534 ZNF277Q9NRM2 450 aaPredicted RBP8.18□□□□□ -1.1
NPHP1-201ENST00000316534 hCG_1642624A0A1W2PR95 340 aa8.17□□□□□ -1.1
NPHP1-201ENST00000316534 A0A1W2PRG0 241 aa8.17□□□□□ -1.1
NPHP1-201ENST00000316534 F8W031 263 aaPredicted RBP8.17□□□□□ -1.1
NPHP1-201ENST00000316534 ERCC5P28715 1186 aaPredicted RBP8.17□□□□□ -1.1
NPHP1-201ENST00000316534 CIITAP33076 1130 aa8.17□□□□□ -1.1
NPHP1-201ENST00000316534 GTF2F1P35269 517 aaKnown RBP eCLIP8.17□□□□□ -1.1
NPHP1-201ENST00000316534 KCNB1Q14721 858 aa8.17□□□□□ -1.1
NPHP1-201ENST00000316534 PIK3AP1Q6ZUJ8 805 aa8.17□□□□□ -1.1
NPHP1-201ENST00000316534 USP49Q70CQ1 688 aa8.17□□□□□ -1.1
NPHP1-201ENST00000316534 APTXQ7Z2E3 356 aaKnown RBP8.17□□□□□ -1.1
NPHP1-201ENST00000316534 LUZP1Q86V48 1076 aa8.17□□□□□ -1.1
NPHP1-201ENST00000316534 SAMD3Q8N6K7 520 aa8.17□□□□□ -1.1
NPHP1-201ENST00000316534 GSDMAQ96QA5 445 aa8.17□□□□□ -1.1
NPHP1-201ENST00000316534 NAP1L4Q99733 375 aaKnown RBP8.17□□□□□ -1.1
NPHP1-201ENST00000316534 MMTAG2Q9BU76 263 aaKnown RBP8.17□□□□□ -1.1
NPHP1-201ENST00000316534 CLIP2Q9UDT6 1046 aa8.17□□□□□ -1.1
NPHP1-201ENST00000316534 STX8Q9UNK0 236 aa8.17□□□□□ -1.1
NPHP1-201ENST00000316534 WNT10BO00744 389 aa8.17□□□□□ -1.1
NPHP1-201ENST00000316534 ABCB5Q2M3G0 1257 aa8.17□□□□□ -1.1
NPHP1-201ENST00000316534 SHROOM1Q2M3G4 852 aaPredicted RBP8.17□□□□□ -1.1
NPHP1-201ENST00000316534 NIM1KQ8IY84 436 aa8.17□□□□□ -1.1
NPHP1-201ENST00000316534 KCTD17Q8N5Z5 321 aa8.17□□□□□ -1.1
NPHP1-201ENST00000316534 TAOK3Q9H2K8 898 aa8.17□□□□□ -1.1
NPHP1-201ENST00000316534 TMEM60Q9H2L4 133 aa8.17□□□□□ -1.1
NPHP1-201ENST00000316534 KCNMB3Q9NPA1 279 aa8.17□□□□□ -1.1
NPHP1-201ENST00000316534 MYOZ2Q9NPC6 264 aa8.17□□□□□ -1.1
NPHP1-201ENST00000316534 SMCO2A6NFE2 343 aa8.17□□□□□ -1.1
NPHP1-201ENST00000316534 ESPNB1AK53 854 aa8.17□□□□□ -1.1
NPHP1-201ENST00000316534 MEIS2O14770 477 aa8.17□□□□□ -1.1
NPHP1-201ENST00000316534 PRR29P0C7W0 189 aa8.17□□□□□ -1.1
NPHP1-201ENST00000316534 KCNJ6P48051 423 aa8.17□□□□□ -1.1
NPHP1-201ENST00000316534 EHHADHQ08426 723 aa8.17□□□□□ -1.1
NPHP1-201ENST00000316534 AP3B2Q13367 1082 aa8.17□□□□□ -1.1
NPHP1-201ENST00000316534 TNIP1Q15025 636 aa8.17□□□□□ -1.1
NPHP1-201ENST00000316534 NONOQ15233 471 aaKnown RBP eCLIP8.17□□□□□ -1.1
NPHP1-201ENST00000316534 Q4G0T1 1027 aa8.17□□□□□ -1.1
NPHP1-201ENST00000316534 KIAA1755Q5JYT7 1200 aa8.17□□□□□ -1.1
NPHP1-201ENST00000316534 MLKLQ8NB16 471 aa8.17□□□□□ -1.1
NPHP1-201ENST00000316534 ENOX1Q8TC92 643 aaKnown RBP8.17□□□□□ -1.1
NPHP1-201ENST00000316534 NAT10Q9H0A0 1025 aaKnown RBP8.17□□□□□ -1.1
NPHP1-201ENST00000316534 SERTAD1Q9UHV2 236 aa8.17□□□□□ -1.1
NPHP1-201ENST00000316534 PITPNM2Q9BZ72 1349 aa8.16□□□□□ -1.1
NPHP1-201ENST00000316534 KLRC4O43908 158 aa8.16□□□□□ -1.1
NPHP1-201ENST00000316534 GOLGA8HP0CJ92 632 aa8.16□□□□□ -1.1
NPHP1-201ENST00000316534 USP11P51784 963 aa8.16□□□□□ -1.1
NPHP1-201ENST00000316534 TMEM119Q4V9L6 283 aa8.16□□□□□ -1.1
NPHP1-201ENST00000316534 NEK8Q86SG6 692 aa8.16□□□□□ -1.1
NPHP1-201ENST00000316534 CCDC82Q8N4S0 544 aa8.16□□□□□ -1.1
NPHP1-201ENST00000316534 KCNF1Q9H3M0 494 aa8.16□□□□□ -1.1
NPHP1-201ENST00000316534 GCFC2P16383 781 aaKnown RBP8.16□□□□□ -1.1
NPHP1-201ENST00000316534 CAP2P40123 477 aa8.16□□□□□ -1.1
NPHP1-201ENST00000316534 PNOCQ13519 176 aa8.16□□□□□ -1.1
NPHP1-201ENST00000316534 CIAPIN1Q6FI81 312 aa8.16□□□□□ -1.1
NPHP1-201ENST00000316534 CEP57L1Q8IYX8 460 aa8.16□□□□□ -1.1
NPHP1-201ENST00000316534 LRRC47Q8N1G4 583 aaKnown RBP8.16□□□□□ -1.1
NPHP1-201ENST00000316534 LARGE2Q8N3Y3 721 aa8.16□□□□□ -1.1
NPHP1-201ENST00000316534 P2RX7Q99572 595 aaKnown RBP8.16□□□□□ -1.1
NPHP1-201ENST00000316534 ZBTB21Q9ULJ3 1066 aa8.16□□□□□ -1.1
NPHP1-201ENST00000316534 PCDHA5Q9Y5H7 936 aa8.16□□□□□ -1.1
NPHP1-201ENST00000316534 RPTORQ8N122 1335 aa8.16□□□□□ -1.1
NPHP1-201ENST00000316534 PPP1R3GB7ZBB8 358 aa8.16□□□□□ -1.1
NPHP1-201ENST00000316534 NDUFB10O96000 172 aa8.16□□□□□ -1.1
NPHP1-201ENST00000316534 POLD1P28340 1107 aa8.16□□□□□ -1.1
NPHP1-201ENST00000316534 GNL2Q13823 731 aaKnown RBP8.16□□□□□ -1.1
NPHP1-201ENST00000316534 SEPT2Q15019 361 aa8.16□□□□□ -1.1
NPHP1-201ENST00000316534 NOL9Q5SY16 702 aaKnown RBP8.16□□□□□ -1.1
NPHP1-201ENST00000316534 CDKAL1Q5VV42 579 aa8.16□□□□□ -1.1
NPHP1-201ENST00000316534 EPSTI1Q96J88 318 aa8.16□□□□□ -1.1
NPHP1-201ENST00000316534 DISC1Q9NRI5 854 aa8.16□□□□□ -1.1
NPHP1-201ENST00000316534 IMPACTQ9P2X3 320 aa8.16□□□□□ -1.1
NPHP1-201ENST00000316534 PPP2R3BQ9Y5P8 575 aa8.16□□□□□ -1.1
NPHP1-201ENST00000316534 F5H6K3 240 aa8.15□□□□□ -1.1
NPHP1-201ENST00000316534 TBX3O15119 743 aa8.15□□□□□ -1.1
NPHP1-201ENST00000316534 FOXN1O15353 648 aa8.15□□□□□ -1.1
NPHP1-201ENST00000316534 POLR2DO15514 142 aaKnown RBP8.15□□□□□ -1.1
NPHP1-201ENST00000316534 GTPBP6O43824 516 aaPredicted RBP8.15□□□□□ -1.1
NPHP1-201ENST00000316534 ADCY7P51828 1080 aa8.15□□□□□ -1.1
NPHP1-201ENST00000316534 KLRC3Q07444 240 aa8.15□□□□□ -1.1
NPHP1-201ENST00000316534 DLGAP5Q15398 846 aa8.15□□□□□ -1.1
NPHP1-201ENST00000316534 TTBK2Q6IQ55 1244 aa8.15□□□□□ -1.1
NPHP1-201ENST00000316534 RNF214Q8ND24 703 aa8.15□□□□□ -1.1
NPHP1-201ENST00000316534 LENG9Q96B70 501 aa8.15□□□□□ -1.1
NPHP1-201ENST00000316534 C7orf25Q9BPX7 421 aa8.15□□□□□ -1.1
NPHP1-201ENST00000316534 G3V3G9 751 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms