RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 HNRNPLLQ8WVV9 542 aaKnown RBP9.69□□□□□ -0.86
COL6A5-202ENST00000312481 GDPD2Q9HCC8 539 aa9.69□□□□□ -0.86
COL6A5-202ENST00000312481 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.69□□□□□ -0.86
COL6A5-202ENST00000312481 E7EWF7 191 aa9.69□□□□□ -0.86
COL6A5-202ENST00000312481 MORC2Q9Y6X9 1032 aaPredicted RBP9.69□□□□□ -0.86
COL6A5-202ENST00000312481 ELF2Q15723 593 aa9.68□□□□□ -0.86
COL6A5-202ENST00000312481 ZMYM1Q5SVZ6 1142 aa9.68□□□□□ -0.86
COL6A5-202ENST00000312481 VSTM4Q8IW00 320 aa9.68□□□□□ -0.86
COL6A5-202ENST00000312481 RHOT2Q8IXI1 618 aa9.68□□□□□ -0.86
COL6A5-202ENST00000312481 FLAD1Q8NFF5 587 aa9.68□□□□□ -0.86
COL6A5-202ENST00000312481 USP44Q9H0E7 712 aa9.68□□□□□ -0.86
COL6A5-202ENST00000312481 SLFN14P0C7P3 912 aa9.68□□□□□ -0.86
COL6A5-202ENST00000312481 IGBP1P78318 339 aa9.68□□□□□ -0.86
COL6A5-202ENST00000312481 SYDE1Q6ZW31 735 aaPredicted RBP9.68□□□□□ -0.86
COL6A5-202ENST00000312481 GSTA5Q7RTV2 222 aa9.68□□□□□ -0.86
COL6A5-202ENST00000312481 DHX58Q96C10 678 aa9.68□□□□□ -0.86
COL6A5-202ENST00000312481 CDHR1Q96JP9 859 aa9.68□□□□□ -0.86
COL6A5-202ENST00000312481 PALLDQ8WX93 1383 aa9.68□□□□□ -0.86
COL6A5-202ENST00000312481 PPFIA2O75334 1257 aa9.68□□□□□ -0.86
COL6A5-202ENST00000312481 SURF1Q15526 300 aa9.68□□□□□ -0.86
COL6A5-202ENST00000312481 C6orf118Q5T5N4 469 aa9.68□□□□□ -0.86
COL6A5-202ENST00000312481 ZSCAN29Q8IWY8 852 aaPredicted RBP9.68□□□□□ -0.86
COL6A5-202ENST00000312481 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.68□□□□□ -0.86
COL6A5-202ENST00000312481 PCCAP05165 728 aaPredicted RBP9.68□□□□□ -0.86
COL6A5-202ENST00000312481 IL9RQ01113 521 aa9.68□□□□□ -0.86
COL6A5-202ENST00000312481 FAM89AQ96GI7 184 aa9.68□□□□□ -0.86
COL6A5-202ENST00000312481 MAP3K14Q99558 947 aa9.68□□□□□ -0.86
COL6A5-202ENST00000312481 XPO4Q9C0E2 1151 aaKnown RBP9.68□□□□□ -0.86
COL6A5-202ENST00000312481 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.68□□□□□ -0.86
COL6A5-202ENST00000312481 DCTN3O75935 186 aa9.68□□□□□ -0.86
COL6A5-202ENST00000312481 NELFBQ8WX92 580 aa9.68□□□□□ -0.86
COL6A5-202ENST00000312481 EYA1Q99502 592 aa9.68□□□□□ -0.86
COL6A5-202ENST00000312481 LZTFL1Q9NQ48 299 aa9.68□□□□□ -0.86
COL6A5-202ENST00000312481 TRAF5O00463 557 aa9.68□□□□□ -0.86
COL6A5-202ENST00000312481 ADCY7P51828 1080 aa9.68□□□□□ -0.86
COL6A5-202ENST00000312481 SNRPFP62306 86 aaKnown RBP9.68□□□□□ -0.86
COL6A5-202ENST00000312481 SPATS2LQ9NUQ6 558 aaKnown RBP9.68□□□□□ -0.86
COL6A5-202ENST00000312481 OTUD6AQ7L8S5 288 aa9.68□□□□□ -0.86
COL6A5-202ENST00000312481 ZBTB38Q8NAP3 1195 aaPredicted RBP9.68□□□□□ -0.86
COL6A5-202ENST00000312481 HEATR3Q7Z4Q2 680 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 ZNF512BQ96KM6 892 aaPredicted RBP9.67□□□□□ -0.86
COL6A5-202ENST00000312481 PPP1R2P1Q96PQ5 205 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 KIF2CQ99661 725 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 SEL1LQ9UBV2 794 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 ANKRD20A3Q5VUR7 823 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 DIS3L2Q8IYB7 885 aaKnown RBP9.67□□□□□ -0.86
COL6A5-202ENST00000312481 TTI1O43156 1089 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 STMN1P16949 149 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 MORC3Q14149 939 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 BZW1Q7L1Q6 419 aaKnown RBP9.67□□□□□ -0.86
COL6A5-202ENST00000312481 ANKRD35Q8N283 1001 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 PCGF5Q86SE9 256 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 MYOCDQ8IZQ8 938 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 CATSPER1Q8NEC5 780 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.67□□□□□ -0.86
COL6A5-202ENST00000312481 EFHD1Q9BUP0 239 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 PGRMC1O00264 195 aaKnown RBP9.67□□□□□ -0.86
COL6A5-202ENST00000312481 MAGEA1P43355 309 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 MAN2A1Q16706 1144 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 HACE1Q8IYU2 909 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 FBXL16Q8N461 479 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.67□□□□□ -0.86
COL6A5-202ENST00000312481 UBLCP1Q8WVY7 318 aaPredicted RBP9.67□□□□□ -0.86
COL6A5-202ENST00000312481 TIPINQ9BVW5 301 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 ARMCX3Q9UH62 379 aaPredicted RBP9.67□□□□□ -0.86
COL6A5-202ENST00000312481 SKIP12755 728 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 KCNA6P17658 529 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 PCK1P35558 622 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 MMS22LQ6ZRQ5 1243 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 KCND1Q9NSA2 647 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 ITGB1BP2Q9UKP3 347 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 SRPRBQ9Y5M8 271 aaKnown RBP9.67□□□□□ -0.86
COL6A5-202ENST00000312481 F8W8V4 182 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 PDE6CP51160 858 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 STRN3Q13033 797 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 KRT40Q6A162 431 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 CCDC197Q8NCU1 140 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 MAML3Q96JK9 1138 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 PPP1R13BQ96KQ4 1090 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 DYTNA2CJ06 578 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 GCP02774 474 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 MMP14P50281 582 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 ZNF658Q5TYW1 1059 aaPredicted RBP9.67□□□□□ -0.86
COL6A5-202ENST00000312481 KCND2Q9NZV8 630 aa9.67□□□□□ -0.86
COL6A5-202ENST00000312481 SRRM3A6NNA2 597 aaPredicted RBP9.66□□□□□ -0.86
COL6A5-202ENST00000312481 AP3B1O00203 1094 aa9.66□□□□□ -0.86
COL6A5-202ENST00000312481 AFMP43652 599 aa9.66□□□□□ -0.86
COL6A5-202ENST00000312481 KLHL30Q0D2K2 578 aa9.66□□□□□ -0.86
COL6A5-202ENST00000312481 ME3Q16798 604 aa9.66□□□□□ -0.86
COL6A5-202ENST00000312481 EIF2AQ9BY44 585 aaKnown RBP9.66□□□□□ -0.86
COL6A5-202ENST00000312481 RRAGDQ9NQL2 400 aaPredicted RBP9.66□□□□□ -0.86
COL6A5-202ENST00000312481 MARCKSP29966 332 aaPredicted RBP9.66□□□□□ -0.86
COL6A5-202ENST00000312481 CEP57Q86XR8 500 aa9.66□□□□□ -0.86
COL6A5-202ENST00000312481 DDX54Q8TDD1 881 aaKnown RBP9.66□□□□□ -0.86
COL6A5-202ENST00000312481 APBB2Q92870 758 aa9.66□□□□□ -0.86
COL6A5-202ENST00000312481 NRBF2Q96F24 287 aa9.66□□□□□ -0.86
COL6A5-202ENST00000312481 PHACTR3Q96KR7 559 aa9.66□□□□□ -0.86
COL6A5-202ENST00000312481 CCDC68Q9H2F9 335 aa9.66□□□□□ -0.86
COL6A5-202ENST00000312481 VEZTQ9HBM0 779 aa9.66□□□□□ -0.86
COL6A5-202ENST00000312481 FMNL1O95466 1100 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms