RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 GOPCQ9HD26 462 aa19.07■□□□□ 0.64
CLCF1-201ENST00000312438 RIC8AQ9NPQ8 531 aa19.07■□□□□ 0.64
CLCF1-201ENST00000312438 PPP1R11O60927 126 aaPredicted RBP19.06■□□□□ 0.64
CLCF1-201ENST00000312438 ECE1P42892 770 aa19.06■□□□□ 0.64
CLCF1-201ENST00000312438 MRPL12P52815 198 aaKnown RBP19.06■□□□□ 0.64
CLCF1-201ENST00000312438 KRBA2Q6ZNG9 492 aa19.06■□□□□ 0.64
CLCF1-201ENST00000312438 C4orf32Q8N8J7 132 aa19.06■□□□□ 0.64
CLCF1-201ENST00000312438 PPP1R9BQ96SB3 815 aa19.06■□□□□ 0.64
CLCF1-201ENST00000312438 GLT8D2Q9H1C3 349 aa19.06■□□□□ 0.64
CLCF1-201ENST00000312438 DEFB129Q9H1M3 183 aa19.06■□□□□ 0.64
CLCF1-201ENST00000312438 SH2D4AQ9H788 454 aa19.06■□□□□ 0.64
CLCF1-201ENST00000312438 BIN2Q9UBW5 565 aaPredicted RBP19.06■□□□□ 0.64
CLCF1-201ENST00000312438 GOLGB1Q14789 3259 aaKnown RBP19.06■□□□□ 0.64
CLCF1-201ENST00000312438 PHF20L1A8MW92 1017 aa19.05■□□□□ 0.64
CLCF1-201ENST00000312438 TMEM232C9JQI7 657 aa19.05■□□□□ 0.64
CLCF1-201ENST00000312438 STX1AQ16623 288 aa19.05■□□□□ 0.64
CLCF1-201ENST00000312438 QRICH1Q2TAL8 776 aa19.05■□□□□ 0.64
CLCF1-201ENST00000312438 LONRF3Q496Y0 759 aa19.05■□□□□ 0.64
CLCF1-201ENST00000312438 CNNM3Q8NE01 707 aa19.05■□□□□ 0.64
CLCF1-201ENST00000312438 ACER1Q8TDN7 264 aa19.05■□□□□ 0.64
CLCF1-201ENST00000312438 GINM1Q9NU53 330 aa19.05■□□□□ 0.64
CLCF1-201ENST00000312438 ANO10Q9NW15 660 aa19.05■□□□□ 0.64
CLCF1-201ENST00000312438 HOOK1Q9UJC3 728 aaKnown RBP19.05■□□□□ 0.64
CLCF1-201ENST00000312438 LAD1O00515 517 aa19.04■□□□□ 0.64
CLCF1-201ENST00000312438 CDC37Q16543 378 aaPredicted RBP19.04■□□□□ 0.64
CLCF1-201ENST00000312438 NEK8Q86SG6 692 aa19.04■□□□□ 0.64
CLCF1-201ENST00000312438 NUP88Q99567 741 aaPredicted RBP19.04■□□□□ 0.64
CLCF1-201ENST00000312438 SYT17Q9BSW7 474 aa19.04■□□□□ 0.64
CLCF1-201ENST00000312438 GPRC5DQ9NZD1 345 aa19.04■□□□□ 0.64
CLCF1-201ENST00000312438 SCAF8Q9UPN6 1271 aaKnown RBP19.04■□□□□ 0.64
CLCF1-201ENST00000312438 VWA3AA6NCI4 1184 aa19.04■□□□□ 0.64
CLCF1-201ENST00000312438 POLR2DO15514 142 aaKnown RBP19.04■□□□□ 0.64
CLCF1-201ENST00000312438 ZNF165P49910 485 aa19.04■□□□□ 0.64
CLCF1-201ENST00000312438 IKQ13123 557 aaPredicted RBP19.04■□□□□ 0.64
CLCF1-201ENST00000312438 ZRSR1Q15695 479 aaKnown RBP19.04■□□□□ 0.64
CLCF1-201ENST00000312438 SYDE2Q5VT97 1194 aa19.04■□□□□ 0.64
CLCF1-201ENST00000312438 JAKMIP3Q5VZ66 844 aa19.04■□□□□ 0.64
CLCF1-201ENST00000312438 CUL5Q93034 780 aa19.04■□□□□ 0.64
CLCF1-201ENST00000312438 PSTPIP2Q9H939 334 aa19.04■□□□□ 0.64
CLCF1-201ENST00000312438 PCDHA1Q9Y5I3 950 aa19.04■□□□□ 0.64
CLCF1-201ENST00000312438 ARFGEF1Q9Y6D6 1849 aa19.04■□□□□ 0.64
CLCF1-201ENST00000312438 ASTN2O75129 1339 aaPredicted RBP19.03■□□□□ 0.64
CLCF1-201ENST00000312438 ORC2Q13416 577 aaPredicted RBP19.03■□□□□ 0.64
CLCF1-201ENST00000312438 KANK3Q6NY19 840 aa19.03■□□□□ 0.64
CLCF1-201ENST00000312438 SPICE1Q8N0Z3 855 aa19.03■□□□□ 0.64
CLCF1-201ENST00000312438 TBCKQ8TEA7 893 aa19.03■□□□□ 0.64
CLCF1-201ENST00000312438 ERCC4Q92889 916 aaPredicted RBP19.03■□□□□ 0.64
CLCF1-201ENST00000312438 AMNQ9BXJ7 453 aa19.03■□□□□ 0.64
CLCF1-201ENST00000312438 VCPKMTQ9H867 229 aa19.03■□□□□ 0.64
CLCF1-201ENST00000312438 CTNND1O60716 968 aaKnown RBP19.02■□□□□ 0.64
CLCF1-201ENST00000312438 LONP1P36776 959 aaKnown RBP19.02■□□□□ 0.64
CLCF1-201ENST00000312438 LETM2Q2VYF4 491 aa19.02■□□□□ 0.64
CLCF1-201ENST00000312438 USP49Q70CQ1 688 aa19.02■□□□□ 0.64
CLCF1-201ENST00000312438 APOBEC3FQ8IUX4 373 aaKnown RBP19.02■□□□□ 0.64
CLCF1-201ENST00000312438 HOOK2Q96ED9 719 aa19.02■□□□□ 0.64
CLCF1-201ENST00000312438 CCDC34Q96HJ3 373 aa19.02■□□□□ 0.64
CLCF1-201ENST00000312438 EPSTI1Q96J88 318 aa19.02■□□□□ 0.64
CLCF1-201ENST00000312438 DNAJC25Q9H1X3 360 aa19.02■□□□□ 0.64
CLCF1-201ENST00000312438 TMEM260Q9NX78 707 aa19.02■□□□□ 0.64
CLCF1-201ENST00000312438 PRPHP41219 470 aa19.02■□□□□ 0.63
CLCF1-201ENST00000312438 CLK2P49760 499 aaKnown RBP19.02■□□□□ 0.63
CLCF1-201ENST00000312438 STAT2P52630 851 aa19.02■□□□□ 0.63
CLCF1-201ENST00000312438 DTHD1Q6ZMT9 781 aa19.02■□□□□ 0.63
CLCF1-201ENST00000312438 SYMPKQ92797 1274 aaKnown RBP19.02■□□□□ 0.63
CLCF1-201ENST00000312438 CBX8Q9HC52 389 aa19.02■□□□□ 0.63
CLCF1-201ENST00000312438 TUBE1Q9UJT0 475 aa19.02■□□□□ 0.63
CLCF1-201ENST00000312438 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.01■□□□□ 0.63
CLCF1-201ENST00000312438 CCNT1O60563 726 aaKnown RBP19.01■□□□□ 0.63
CLCF1-201ENST00000312438 TRAF1Q13077 416 aa19.01■□□□□ 0.63
CLCF1-201ENST00000312438 IL17AQ16552 155 aa19.01■□□□□ 0.63
CLCF1-201ENST00000312438 ANGEL2Q5VTE6 544 aaKnown RBP19.01■□□□□ 0.63
CLCF1-201ENST00000312438 FBXO11Q86XK2 927 aa19.01■□□□□ 0.63
CLCF1-201ENST00000312438 CHURC1Q8WUH1 139 aa19.01■□□□□ 0.63
CLCF1-201ENST00000312438 PDLIM2Q96JY6 352 aa19.01■□□□□ 0.63
CLCF1-201ENST00000312438 PYM1Q9BRP8 204 aaKnown RBP19.01■□□□□ 0.63
CLCF1-201ENST00000312438 SERTAD1Q9UHV2 236 aa19.01■□□□□ 0.63
CLCF1-201ENST00000312438 PLA2G6O60733 806 aa19■□□□□ 0.63
CLCF1-201ENST00000312438 MDM2Q00987 491 aaPredicted RBP19■□□□□ 0.63
CLCF1-201ENST00000312438 KIAA1755Q5JYT7 1200 aa19■□□□□ 0.63
CLCF1-201ENST00000312438 DCAF15Q66K64 600 aa19■□□□□ 0.63
CLCF1-201ENST00000312438 PDILTQ8N807 584 aa19■□□□□ 0.63
CLCF1-201ENST00000312438 NAT10Q9H0A0 1025 aaKnown RBP19■□□□□ 0.63
CLCF1-201ENST00000312438 USP25Q9UHP3 1055 aa19■□□□□ 0.63
CLCF1-201ENST00000312438 PRR12Q9ULL5 1215 aa19■□□□□ 0.63
CLCF1-201ENST00000312438 FAM83BQ5T0W9 1011 aa19■□□□□ 0.63
CLCF1-201ENST00000312438 NBPF12Q5TAG4 269 aaPredicted RBP19■□□□□ 0.63
CLCF1-201ENST00000312438 LUZP1Q86V48 1076 aa19■□□□□ 0.63
CLCF1-201ENST00000312438 TMEM60Q9H2L4 133 aa19■□□□□ 0.63
CLCF1-201ENST00000312438 MYH4Q9Y623 1939 aa19■□□□□ 0.63
CLCF1-201ENST00000312438 EPS15P42566 896 aa18.99■□□□□ 0.63
CLCF1-201ENST00000312438 NLRP12P59046 1061 aa18.99■□□□□ 0.63
CLCF1-201ENST00000312438 MCTP2Q6DN12 878 aa18.99■□□□□ 0.63
CLCF1-201ENST00000312438 FAM160B2Q86V87 743 aa18.99■□□□□ 0.63
CLCF1-201ENST00000312438 TRPM4Q8TD43 1214 aa18.99■□□□□ 0.63
CLCF1-201ENST00000312438 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.99■□□□□ 0.63
CLCF1-201ENST00000312438 ACTN4O43707 911 aaKnown RBP18.98■□□□□ 0.63
CLCF1-201ENST00000312438 NEMFO60524 1076 aa18.98■□□□□ 0.63
CLCF1-201ENST00000312438 SLFN14P0C7P3 912 aa18.98■□□□□ 0.63
CLCF1-201ENST00000312438 PNOCQ13519 176 aa18.98■□□□□ 0.63
CLCF1-201ENST00000312438 UBE2SQ16763 222 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms