RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 CREG2Q8IUH2 290 aa16.38■□□□□ 0.21
COL6A2-202ENST00000310645 CSGALNACT2Q8N6G5 542 aa16.38■□□□□ 0.21
COL6A2-202ENST00000310645 CEP89Q96ST8 783 aa16.38■□□□□ 0.21
COL6A2-202ENST00000310645 SOS2Q07890 1332 aaPredicted RBP16.38■□□□□ 0.21
COL6A2-202ENST00000310645 ESYT3A0FGR9 886 aa16.38■□□□□ 0.21
COL6A2-202ENST00000310645 IRS4O14654 1257 aaPredicted RBP16.38■□□□□ 0.21
COL6A2-202ENST00000310645 SETQ01105 290 aaPredicted RBP16.38■□□□□ 0.21
COL6A2-202ENST00000310645 POTEDQ86YR6 584 aa16.38■□□□□ 0.21
COL6A2-202ENST00000310645 RNF41Q9H4P4 317 aaPredicted RBP16.38■□□□□ 0.21
COL6A2-202ENST00000310645 TACC1O75410 805 aa16.38■□□□□ 0.21
COL6A2-202ENST00000310645 USP8P40818 1118 aa16.38■□□□□ 0.21
COL6A2-202ENST00000310645 DNM2P50570 870 aa16.38■□□□□ 0.21
COL6A2-202ENST00000310645 ADSSL1Q8N142 457 aa16.38■□□□□ 0.21
COL6A2-202ENST00000310645 ESR2Q92731 530 aa16.38■□□□□ 0.21
COL6A2-202ENST00000310645 SNX12Q9UMY4 172 aa16.38■□□□□ 0.21
COL6A2-202ENST00000310645 GUCY1A3Q02108 690 aa16.37■□□□□ 0.21
COL6A2-202ENST00000310645 ENAHQ8N8S7 591 aaPredicted RBP16.37■□□□□ 0.21
COL6A2-202ENST00000310645 ZNF507Q8TCN5 953 aa16.37■□□□□ 0.21
COL6A2-202ENST00000310645 CXorf56Q9H5V9 222 aa16.37■□□□□ 0.21
COL6A2-202ENST00000310645 EXOC1Q9NV70 894 aa16.37■□□□□ 0.21
COL6A2-202ENST00000310645 MYH10P35580 1976 aa16.37■□□□□ 0.21
COL6A2-202ENST00000310645 MYH7P12883 1935 aa16.37■□□□□ 0.21
COL6A2-202ENST00000310645 NUTM2BA6NNL0 878 aaPredicted RBP16.37■□□□□ 0.21
COL6A2-202ENST00000310645 NUTM2EB1AL46 878 aaPredicted RBP16.37■□□□□ 0.21
COL6A2-202ENST00000310645 PSMA7O14818 248 aa16.37■□□□□ 0.21
COL6A2-202ENST00000310645 CTSWP56202 376 aa16.37■□□□□ 0.21
COL6A2-202ENST00000310645 RNASE9P60153 205 aaKnown RBP16.37■□□□□ 0.21
COL6A2-202ENST00000310645 NNTQ13423 1086 aa16.37■□□□□ 0.21
COL6A2-202ENST00000310645 GBP6Q6ZN66 633 aa16.37■□□□□ 0.21
COL6A2-202ENST00000310645 RASGRP4Q8TDF6 673 aa16.37■□□□□ 0.21
COL6A2-202ENST00000310645 IFIH1Q9BYX4 1025 aaKnown RBP16.37■□□□□ 0.21
COL6A2-202ENST00000310645 USO1O60763 962 aaKnown RBP16.36■□□□□ 0.21
COL6A2-202ENST00000310645 BCAMP50895 628 aa16.36■□□□□ 0.21
COL6A2-202ENST00000310645 GUCY2FP51841 1108 aa16.36■□□□□ 0.21
COL6A2-202ENST00000310645 APBA1Q02410 837 aa16.36■□□□□ 0.21
COL6A2-202ENST00000310645 SWT1Q5T5J6 900 aaKnown RBP16.36■□□□□ 0.21
COL6A2-202ENST00000310645 TOM1L2Q6ZVM7 507 aa16.36■□□□□ 0.21
COL6A2-202ENST00000310645 C2CD5Q86YS7 1000 aa16.36■□□□□ 0.21
COL6A2-202ENST00000310645 VGLL2Q8N8G2 317 aa16.36■□□□□ 0.21
COL6A2-202ENST00000310645 ANO9A1A5B4 782 aa16.36■□□□□ 0.21
COL6A2-202ENST00000310645 ZNF263O14978 683 aa16.36■□□□□ 0.21
COL6A2-202ENST00000310645 ARID4AP29374 1257 aaPredicted RBP16.36■□□□□ 0.21
COL6A2-202ENST00000310645 DNAJC10Q8IXB1 793 aa16.36■□□□□ 0.21
COL6A2-202ENST00000310645 ZIM3Q96PE6 472 aa16.36■□□□□ 0.21
COL6A2-202ENST00000310645 SPATA31A3Q5VYP0 1347 aa16.36■□□□□ 0.21
COL6A2-202ENST00000310645 DDX60Q8IY21 1712 aaKnown RBP16.36■□□□□ 0.21
COL6A2-202ENST00000310645 PRPF3O43395 683 aaKnown RBP16.36■□□□□ 0.21
COL6A2-202ENST00000310645 AKR1B10O60218 316 aa16.36■□□□□ 0.21
COL6A2-202ENST00000310645 CYP7A1P22680 504 aa16.36■□□□□ 0.21
COL6A2-202ENST00000310645 VAV2P52735 878 aa16.36■□□□□ 0.21
COL6A2-202ENST00000310645 PUM3Q15397 648 aaKnown RBP16.36■□□□□ 0.21
COL6A2-202ENST00000310645 ZCRB1Q8TBF4 217 aaKnown RBP16.36■□□□□ 0.21
COL6A2-202ENST00000310645 LPIN2Q92539 896 aa16.36■□□□□ 0.21
COL6A2-202ENST00000310645 CCDC43Q96MW1 224 aaKnown RBP16.36■□□□□ 0.21
COL6A2-202ENST00000310645 SH3GL2Q99962 352 aa16.36■□□□□ 0.21
COL6A2-202ENST00000310645 NOC4LQ9BVI4 516 aaKnown RBP16.36■□□□□ 0.21
COL6A2-202ENST00000310645 FAM207AQ9NSI2 230 aaPredicted RBP16.36■□□□□ 0.21
COL6A2-202ENST00000310645 MTMR7Q9Y216 660 aa16.36■□□□□ 0.21
COL6A2-202ENST00000310645 AKAP11Q9UKA4 1901 aa16.35■□□□□ 0.21
COL6A2-202ENST00000310645 ATRNO75882 1429 aa16.35■□□□□ 0.21
COL6A2-202ENST00000310645 A0A1W2PQC6 194 aa16.35■□□□□ 0.21
COL6A2-202ENST00000310645 ZSCAN5CA6NGD5 496 aaPredicted RBP16.35■□□□□ 0.21
COL6A2-202ENST00000310645 NKRFO15226 690 aaKnown RBP eCLIP16.35■□□□□ 0.21
COL6A2-202ENST00000310645 PAFAH1B1P43034 410 aa16.35■□□□□ 0.21
COL6A2-202ENST00000310645 SEC24CP53992 1094 aa16.35■□□□□ 0.21
COL6A2-202ENST00000310645 C8orf74Q6P047 294 aa16.35■□□□□ 0.21
COL6A2-202ENST00000310645 MS4A14Q96JA4 679 aa16.35■□□□□ 0.21
COL6A2-202ENST00000310645 BUB1O43683 1085 aa16.35■□□□□ 0.21
COL6A2-202ENST00000310645 EEF1GP26641 437 aaKnown RBP16.35■□□□□ 0.21
COL6A2-202ENST00000310645 EPHB4P54760 987 aa16.35■□□□□ 0.21
COL6A2-202ENST00000310645 ZBED6P86452 979 aa16.35■□□□□ 0.21
COL6A2-202ENST00000310645 MMGT1Q8N4V1 131 aa16.35■□□□□ 0.21
COL6A2-202ENST00000310645 OSBPL9Q96SU4 736 aa16.35■□□□□ 0.21
COL6A2-202ENST00000310645 ZSCAN10Q96SZ4 725 aaPredicted RBP16.35■□□□□ 0.21
COL6A2-202ENST00000310645 STIM2Q9P246 746 aa16.35■□□□□ 0.21
COL6A2-202ENST00000310645 PDS5AQ29RF7 1337 aaKnown RBP16.35■□□□□ 0.21
COL6A2-202ENST00000310645 SEC23AQ15436 765 aa16.35■□□□□ 0.21
COL6A2-202ENST00000310645 CCDC178Q5BJE1 867 aa16.35■□□□□ 0.21
COL6A2-202ENST00000310645 CFAP58Q5T655 872 aa16.35■□□□□ 0.21
COL6A2-202ENST00000310645 B4GALNT4Q76KP1 1039 aa16.35■□□□□ 0.21
COL6A2-202ENST00000310645 TRIM58Q8NG06 486 aa16.35■□□□□ 0.21
COL6A2-202ENST00000310645 NFU1Q9UMS0 254 aa16.35■□□□□ 0.21
COL6A2-202ENST00000310645 RTL9Q8NET4 1388 aa16.34■□□□□ 0.21
COL6A2-202ENST00000310645 RASSF10A6NK89 507 aa16.34■□□□□ 0.21
COL6A2-202ENST00000310645 SRGNP10124 158 aa16.34■□□□□ 0.21
COL6A2-202ENST00000310645 SLC5A1P13866 664 aa16.34■□□□□ 0.21
COL6A2-202ENST00000310645 NPY5RQ15761 445 aa16.34■□□□□ 0.21
COL6A2-202ENST00000310645 MEA1Q16626 185 aa16.34■□□□□ 0.21
COL6A2-202ENST00000310645 ZNF512BQ96KM6 892 aaPredicted RBP16.34■□□□□ 0.21
COL6A2-202ENST00000310645 RNPC3Q96LT9 517 aaKnown RBP16.34■□□□□ 0.21
COL6A2-202ENST00000310645 CD248Q9HCU0 757 aa16.34■□□□□ 0.21
COL6A2-202ENST00000310645 ADAMTS7Q9UKP4 1686 aa16.34■□□□□ 0.21
COL6A2-202ENST00000310645 NMT2O60551 498 aa16.34■□□□□ 0.21
COL6A2-202ENST00000310645 UBA7P41226 1012 aa16.34■□□□□ 0.21
COL6A2-202ENST00000310645 ATP2B2Q01814 1243 aa16.34■□□□□ 0.21
COL6A2-202ENST00000310645 SLC4A8Q2Y0W8 1093 aa16.34■□□□□ 0.21
COL6A2-202ENST00000310645 CCDC170Q8IYT3 715 aa16.34■□□□□ 0.21
COL6A2-202ENST00000310645 FNBP4Q8N3X1 1017 aaPredicted RBP16.34■□□□□ 0.21
COL6A2-202ENST00000310645 CABS1Q96KC9 395 aa16.34■□□□□ 0.21
COL6A2-202ENST00000310645 CNOT6LQ96LI5 555 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms