RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 PKNOX2Q96KN3 472 aa17.14■□□□□ 0.33
SPIRE1-201ENST00000309836 PLIN2Q99541 437 aa17.14■□□□□ 0.33
SPIRE1-201ENST00000309836 ABHD10Q9NUJ1 306 aa17.14■□□□□ 0.33
SPIRE1-201ENST00000309836 KBTBD4Q9NVX7 518 aa17.14■□□□□ 0.33
SPIRE1-201ENST00000309836 ZHX1Q9UKY1 873 aaPredicted RBP17.14■□□□□ 0.33
SPIRE1-201ENST00000309836 MYH8P13535 1937 aa17.14■□□□□ 0.33
SPIRE1-201ENST00000309836 MYH1P12882 1939 aa17.14■□□□□ 0.33
SPIRE1-201ENST00000309836 KLRF2D3W0D1 207 aa17.14■□□□□ 0.33
SPIRE1-201ENST00000309836 H7C1D1 291 aa17.14■□□□□ 0.33
SPIRE1-201ENST00000309836 PRPHP41219 470 aa17.14■□□□□ 0.33
SPIRE1-201ENST00000309836 TEX35Q5T0J7 233 aa17.14■□□□□ 0.33
SPIRE1-201ENST00000309836 TRAPPC3LQ5T215 181 aa17.14■□□□□ 0.33
SPIRE1-201ENST00000309836 TMTC1Q8IUR5 882 aa17.14■□□□□ 0.33
SPIRE1-201ENST00000309836 ANKRD20A12PQ8NF67 263 aa17.14■□□□□ 0.33
SPIRE1-201ENST00000309836 EYA3Q99504 573 aa17.14■□□□□ 0.33
SPIRE1-201ENST00000309836 CD209Q9NNX6 404 aa17.14■□□□□ 0.33
SPIRE1-201ENST00000309836 ARGLU1Q9NWB6 273 aaPredicted RBP17.14■□□□□ 0.33
SPIRE1-201ENST00000309836 GPR75-ASB3A0A0A6YYF3 556 aa17.13■□□□□ 0.33
SPIRE1-201ENST00000309836 SEC31AO94979 1220 aaKnown RBP17.13■□□□□ 0.33
SPIRE1-201ENST00000309836 UBA7P41226 1012 aa17.13■□□□□ 0.33
SPIRE1-201ENST00000309836 PLA2G4AP47712 749 aa17.13■□□□□ 0.33
SPIRE1-201ENST00000309836 TRIM14Q14142 442 aa17.13■□□□□ 0.33
SPIRE1-201ENST00000309836 PRR5LQ6MZQ0 368 aa17.13■□□□□ 0.33
SPIRE1-201ENST00000309836 TEX11Q8IYF3 940 aa17.13■□□□□ 0.33
SPIRE1-201ENST00000309836 NEDD1Q8NHV4 660 aa17.13■□□□□ 0.33
SPIRE1-201ENST00000309836 ZMYND12Q9H0C1 365 aa17.13■□□□□ 0.33
SPIRE1-201ENST00000309836 LAD1O00515 517 aa17.12■□□□□ 0.33
SPIRE1-201ENST00000309836 KIF5CO60282 957 aa17.12■□□□□ 0.33
SPIRE1-201ENST00000309836 UFL1O94874 794 aa17.12■□□□□ 0.33
SPIRE1-201ENST00000309836 RHOBTB3O94955 611 aa17.12■□□□□ 0.33
SPIRE1-201ENST00000309836 ARHGAP25P42331 645 aa17.12■□□□□ 0.33
SPIRE1-201ENST00000309836 UBXN1Q04323 297 aa17.12■□□□□ 0.33
SPIRE1-201ENST00000309836 ZNF569Q5MCW4 686 aa17.12■□□□□ 0.33
SPIRE1-201ENST00000309836 TMCO3Q6UWJ1 677 aa17.12■□□□□ 0.33
SPIRE1-201ENST00000309836 FAM196AQ6ZSG2 479 aa17.12■□□□□ 0.33
SPIRE1-201ENST00000309836 GPR161Q8N6U8 529 aaKnown RBP17.12■□□□□ 0.33
SPIRE1-201ENST00000309836 RASSF8Q8NHQ8 419 aa17.12■□□□□ 0.33
SPIRE1-201ENST00000309836 LGALS16A8MUM7 142 aa17.12■□□□□ 0.33
SPIRE1-201ENST00000309836 ABL1P00519 1130 aa17.12■□□□□ 0.33
SPIRE1-201ENST00000309836 IL1R1P14778 569 aa17.12■□□□□ 0.33
SPIRE1-201ENST00000309836 PLCG1P19174 1290 aa17.12■□□□□ 0.33
SPIRE1-201ENST00000309836 NAPAP54920 295 aa17.12■□□□□ 0.33
SPIRE1-201ENST00000309836 RHBDL3P58872 404 aa17.12■□□□□ 0.33
SPIRE1-201ENST00000309836 KRT25Q7Z3Z0 450 aa17.12■□□□□ 0.33
SPIRE1-201ENST00000309836 CREBRFQ8IUR6 639 aa17.12■□□□□ 0.33
SPIRE1-201ENST00000309836 FNBP4Q8N3X1 1017 aaPredicted RBP17.12■□□□□ 0.33
SPIRE1-201ENST00000309836 GIMAP8Q8ND71 665 aaPredicted RBP17.12■□□□□ 0.33
SPIRE1-201ENST00000309836 RABGGTAQ92696 567 aa17.12■□□□□ 0.33
SPIRE1-201ENST00000309836 NUP88Q99567 741 aaPredicted RBP17.12■□□□□ 0.33
SPIRE1-201ENST00000309836 TTF2Q9UNY4 1162 aaKnown RBP17.12■□□□□ 0.33
SPIRE1-201ENST00000309836 MYL1P05976 194 aa17.11■□□□□ 0.33
SPIRE1-201ENST00000309836 OR52Z1P0C646 297 aa17.11■□□□□ 0.33
SPIRE1-201ENST00000309836 TERF2Q15554 542 aa17.11■□□□□ 0.33
SPIRE1-201ENST00000309836 TTI2Q6NXR4 508 aa17.11■□□□□ 0.33
SPIRE1-201ENST00000309836 USP17L2Q6R6M4 530 aa17.11■□□□□ 0.33
SPIRE1-201ENST00000309836 CYP26C1Q6V0L0 522 aa17.11■□□□□ 0.33
SPIRE1-201ENST00000309836 CABP7Q86V35 215 aa17.11■□□□□ 0.33
SPIRE1-201ENST00000309836 SLC35F6Q8N357 371 aa17.11■□□□□ 0.33
SPIRE1-201ENST00000309836 MB21D1Q8N884 522 aa17.11■□□□□ 0.33
SPIRE1-201ENST00000309836 GOLGA1Q92805 767 aa17.11■□□□□ 0.33
SPIRE1-201ENST00000309836 THAP9Q9H5L6 903 aa17.11■□□□□ 0.33
SPIRE1-201ENST00000309836 KRT9P35527 623 aa17.1■□□□□ 0.33
SPIRE1-201ENST00000309836 TXNRD1Q16881 649 aa17.1■□□□□ 0.33
SPIRE1-201ENST00000309836 CC2D1AQ6P1N0 951 aaPredicted RBP17.1■□□□□ 0.33
SPIRE1-201ENST00000309836 CERS3Q8IU89 383 aa17.1■□□□□ 0.33
SPIRE1-201ENST00000309836 ZNF507Q8TCN5 953 aa17.1■□□□□ 0.33
SPIRE1-201ENST00000309836 RPGRQ92834 1020 aaKnown RBP17.1■□□□□ 0.33
SPIRE1-201ENST00000309836 DUSP9Q99956 384 aaKnown RBP17.1■□□□□ 0.33
SPIRE1-201ENST00000309836 ZNF287Q9HBT7 754 aa17.1■□□□□ 0.33
SPIRE1-201ENST00000309836 SMCO2A6NFE2 343 aa17.1■□□□□ 0.33
SPIRE1-201ENST00000309836 ATP2B4P23634 1241 aa17.1■□□□□ 0.33
SPIRE1-201ENST00000309836 NOVP48745 357 aa17.1■□□□□ 0.33
SPIRE1-201ENST00000309836 NONOQ15233 471 aaKnown RBP eCLIP17.1■□□□□ 0.33
SPIRE1-201ENST00000309836 LETM2Q2VYF4 491 aa17.1■□□□□ 0.33
SPIRE1-201ENST00000309836 CERKQ8TCT0 537 aa17.1■□□□□ 0.33
SPIRE1-201ENST00000309836 CEP95Q96GE4 821 aa17.1■□□□□ 0.33
SPIRE1-201ENST00000309836 SLF1Q9BQI6 1058 aa17.1■□□□□ 0.33
SPIRE1-201ENST00000309836 PARD6BQ9BYG5 372 aa17.1■□□□□ 0.33
SPIRE1-201ENST00000309836 CDC23Q9UJX2 597 aa17.1■□□□□ 0.33
SPIRE1-201ENST00000309836 GGA1Q9UJY5 639 aa17.1■□□□□ 0.33
SPIRE1-201ENST00000309836 REXO2Q9Y3B8 237 aaKnown RBP17.1■□□□□ 0.33
SPIRE1-201ENST00000309836 GAKO14976 1311 aa17.09■□□□□ 0.33
SPIRE1-201ENST00000309836 TTC26A0AVF1 554 aa17.09■□□□□ 0.33
SPIRE1-201ENST00000309836 CCNT1O60563 726 aaKnown RBP17.09■□□□□ 0.33
SPIRE1-201ENST00000309836 EEF1GP26641 437 aaKnown RBP17.09■□□□□ 0.33
SPIRE1-201ENST00000309836 SEMA3FQ13275 785 aa17.09■□□□□ 0.33
SPIRE1-201ENST00000309836 CRY2Q49AN0 593 aa17.09■□□□□ 0.33
SPIRE1-201ENST00000309836 SRGAP1Q7Z6B7 1085 aa17.09■□□□□ 0.33
SPIRE1-201ENST00000309836 RRP36Q96EU6 259 aaKnown RBP17.09■□□□□ 0.33
SPIRE1-201ENST00000309836 TRIM47Q96LD4 638 aa17.09■□□□□ 0.33
SPIRE1-201ENST00000309836 PIGSQ96S52 555 aa17.09■□□□□ 0.33
SPIRE1-201ENST00000309836 CHP1Q99653 195 aa17.09■□□□□ 0.33
SPIRE1-201ENST00000309836 CUEDC2Q9H467 287 aa17.09■□□□□ 0.33
SPIRE1-201ENST00000309836 MAGEF1Q9HAY2 307 aa17.09■□□□□ 0.33
SPIRE1-201ENST00000309836 C6orf50Q9HD87 102 aa17.09■□□□□ 0.33
SPIRE1-201ENST00000309836 A0A1W2PQC6 194 aa17.08■□□□□ 0.33
SPIRE1-201ENST00000309836 USP17L5A8MUK1 530 aa17.08■□□□□ 0.33
SPIRE1-201ENST00000309836 PSMA7O14818 248 aa17.08■□□□□ 0.33
SPIRE1-201ENST00000309836 TOM1O60784 492 aa17.08■□□□□ 0.33
SPIRE1-201ENST00000309836 SASH3O75995 380 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms