RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 RC3H1Q5TC82 1133 aaKnown RBP12.71□□□□□ -0.38
PCDHGC3-201ENST00000308177 MAATS1Q7Z4T9 603 aa12.71□□□□□ -0.38
PCDHGC3-201ENST00000308177 MASTLQ96GX5 879 aa12.71□□□□□ -0.38
PCDHGC3-201ENST00000308177 MYO5BQ9ULV0 1848 aa12.71□□□□□ -0.38
PCDHGC3-201ENST00000308177 PI4KBQ9UBF8 816 aa12.7□□□□□ -0.38
PCDHGC3-201ENST00000308177 MAN1B1Q9UKM7 699 aa12.7□□□□□ -0.38
PCDHGC3-201ENST00000308177 GCOM1H8Y6P7 765 aaPredicted RBP12.7□□□□□ -0.38
PCDHGC3-201ENST00000308177 hCG_1984214I3L0E3 225 aa12.7□□□□□ -0.38
PCDHGC3-201ENST00000308177 DKC1O60832 514 aaKnown RBP eCLIP12.7□□□□□ -0.38
PCDHGC3-201ENST00000308177 POLR2MP0CAP2 368 aa12.7□□□□□ -0.38
PCDHGC3-201ENST00000308177 PTPREP23469 700 aa12.7□□□□□ -0.38
PCDHGC3-201ENST00000308177 MAGEA1P43355 309 aa12.7□□□□□ -0.38
PCDHGC3-201ENST00000308177 PRKG1Q13976 671 aa12.7□□□□□ -0.38
PCDHGC3-201ENST00000308177 SPICE1Q8N0Z3 855 aa12.7□□□□□ -0.38
PCDHGC3-201ENST00000308177 ZNF713Q8N859 430 aaPredicted RBP12.7□□□□□ -0.38
PCDHGC3-201ENST00000308177 COA7Q96BR5 231 aa12.7□□□□□ -0.38
PCDHGC3-201ENST00000308177 EPSTI1Q96J88 318 aa12.7□□□□□ -0.38
PCDHGC3-201ENST00000308177 SLC39A2Q9NP94 309 aa12.7□□□□□ -0.38
PCDHGC3-201ENST00000308177 NTSR2O95665 410 aa12.7□□□□□ -0.38
PCDHGC3-201ENST00000308177 TUBB2AQ13885 445 aa12.7□□□□□ -0.38
PCDHGC3-201ENST00000308177 BARGINQ6ZT62 677 aa12.7□□□□□ -0.38
PCDHGC3-201ENST00000308177 TUBB2BQ9BVA1 445 aa12.7□□□□□ -0.38
PCDHGC3-201ENST00000308177 SHTN1A0MZ66 631 aa12.7□□□□□ -0.38
PCDHGC3-201ENST00000308177 MYCNP04198 464 aaPredicted RBP12.7□□□□□ -0.38
PCDHGC3-201ENST00000308177 SMYD4Q8IYR2 804 aaPredicted RBP12.7□□□□□ -0.38
PCDHGC3-201ENST00000308177 CACTINQ8WUQ7 758 aaKnown RBP12.7□□□□□ -0.38
PCDHGC3-201ENST00000308177 UBN2Q6ZU65 1347 aa12.69□□□□□ -0.38
PCDHGC3-201ENST00000308177 NMT2O60551 498 aa12.69□□□□□ -0.38
PCDHGC3-201ENST00000308177 EXOC3O60645 756 aa12.69□□□□□ -0.38
PCDHGC3-201ENST00000308177 GDF11O95390 407 aa12.69□□□□□ -0.38
PCDHGC3-201ENST00000308177 ALAS1P13196 640 aa12.69□□□□□ -0.38
PCDHGC3-201ENST00000308177 ASIC2Q16515 512 aa12.69□□□□□ -0.38
PCDHGC3-201ENST00000308177 SLC27A3Q5K4L6 730 aa12.69□□□□□ -0.38
PCDHGC3-201ENST00000308177 FAM26FQ5R3K3 315 aa12.69□□□□□ -0.38
PCDHGC3-201ENST00000308177 SLC44A5Q8NCS7 719 aa12.69□□□□□ -0.38
PCDHGC3-201ENST00000308177 LINC00116Q8NCU8 138 aa12.69□□□□□ -0.38
PCDHGC3-201ENST00000308177 IQCDQ96DY2 449 aa12.69□□□□□ -0.38
PCDHGC3-201ENST00000308177 DESI2Q9BSY9 194 aa12.69□□□□□ -0.38
PCDHGC3-201ENST00000308177 SPATA31A5Q5VU36 1347 aa12.69□□□□□ -0.38
PCDHGC3-201ENST00000308177 SPATA31A7Q8IWB4 1347 aa12.69□□□□□ -0.38
PCDHGC3-201ENST00000308177 HSF2BPO75031 334 aa12.69□□□□□ -0.38
PCDHGC3-201ENST00000308177 GPIHBP1Q8IV16 184 aa12.69□□□□□ -0.38
PCDHGC3-201ENST00000308177 FNBP4Q8N3X1 1017 aaPredicted RBP12.69□□□□□ -0.38
PCDHGC3-201ENST00000308177 PAF1Q8N7H5 531 aa12.69□□□□□ -0.38
PCDHGC3-201ENST00000308177 FAM212AQ96EL1 285 aa12.69□□□□□ -0.38
PCDHGC3-201ENST00000308177 EEF2KMTQ96G04 330 aa12.69□□□□□ -0.38
PCDHGC3-201ENST00000308177 TMEM47Q9BQJ4 181 aa12.69□□□□□ -0.38
PCDHGC3-201ENST00000308177 SIGLEC1Q9BZZ2 1709 aa12.69□□□□□ -0.38
PCDHGC3-201ENST00000308177 GNA14O95837 355 aa12.69□□□□□ -0.38
PCDHGC3-201ENST00000308177 RESP18Q5W5W9 173 aa12.69□□□□□ -0.38
PCDHGC3-201ENST00000308177 RRAGAQ7L523 313 aa12.69□□□□□ -0.38
PCDHGC3-201ENST00000308177 DYDC1Q8WWB3 177 aa12.69□□□□□ -0.38
PCDHGC3-201ENST00000308177 NLRC4Q9NPP4 1024 aa12.69□□□□□ -0.38
PCDHGC3-201ENST00000308177 GBP2P32456 591 aaPredicted RBP12.68□□□□□ -0.38
PCDHGC3-201ENST00000308177 ETF1P62495 437 aaKnown RBP12.68□□□□□ -0.38
PCDHGC3-201ENST00000308177 ARL6IP4Q66PJ3 421 aaKnown RBP12.68□□□□□ -0.38
PCDHGC3-201ENST00000308177 ENOX1Q8TC92 643 aaKnown RBP12.68□□□□□ -0.38
PCDHGC3-201ENST00000308177 SECISBP2LQ93073 1101 aaKnown RBP12.68□□□□□ -0.38
PCDHGC3-201ENST00000308177 NSUN4Q96CB9 384 aaKnown RBP12.68□□□□□ -0.38
PCDHGC3-201ENST00000308177 IFT74Q96LB3 600 aa12.68□□□□□ -0.38
PCDHGC3-201ENST00000308177 PANK4Q9NVE7 773 aa12.68□□□□□ -0.38
PCDHGC3-201ENST00000308177 ANKRD62A6NC57 917 aa12.68□□□□□ -0.38
PCDHGC3-201ENST00000308177 LMAN1P49257 510 aa12.68□□□□□ -0.38
PCDHGC3-201ENST00000308177 PAXIP1Q6ZW49 1069 aaPredicted RBP12.68□□□□□ -0.38
PCDHGC3-201ENST00000308177 FMR1NBQ8N0W7 255 aaPredicted RBP12.68□□□□□ -0.38
PCDHGC3-201ENST00000308177 LARP4BQ92615 738 aaKnown RBP12.68□□□□□ -0.38
PCDHGC3-201ENST00000308177 FNBP1Q96RU3 617 aa12.68□□□□□ -0.38
PCDHGC3-201ENST00000308177 GOLPH3LQ9H4A5 285 aa12.68□□□□□ -0.38
PCDHGC3-201ENST00000308177 EXOC7Q9UPT5 735 aa12.68□□□□□ -0.38
PCDHGC3-201ENST00000308177 MROH7-TTC4A0A0A0MT08 1334 aa12.68□□□□□ -0.38
PCDHGC3-201ENST00000308177 GCFC2P16383 781 aaKnown RBP12.68□□□□□ -0.38
PCDHGC3-201ENST00000308177 GTF2F1P35269 517 aaKnown RBP eCLIP12.68□□□□□ -0.38
PCDHGC3-201ENST00000308177 COPB1P53618 953 aaKnown RBP12.68□□□□□ -0.38
PCDHGC3-201ENST00000308177 ELF2Q15723 593 aa12.68□□□□□ -0.38
PCDHGC3-201ENST00000308177 PFKFB3Q16875 520 aaPredicted RBP12.68□□□□□ -0.38
PCDHGC3-201ENST00000308177 SYNCQ9H7C4 482 aa12.68□□□□□ -0.38
PCDHGC3-201ENST00000308177 PPP2R2CQ9Y2T4 447 aa12.68□□□□□ -0.38
PCDHGC3-201ENST00000308177 RAD17O75943 681 aa12.67□□□□□ -0.38
PCDHGC3-201ENST00000308177 KLHL30Q0D2K2 578 aa12.67□□□□□ -0.38
PCDHGC3-201ENST00000308177 PLA2G4DQ86XP0 818 aa12.67□□□□□ -0.38
PCDHGC3-201ENST00000308177 KIAA1524Q8TCG1 905 aa12.67□□□□□ -0.38
PCDHGC3-201ENST00000308177 OXER1Q8TDS5 423 aa12.67□□□□□ -0.38
PCDHGC3-201ENST00000308177 CCDC94Q9BW85 323 aaPredicted RBP12.67□□□□□ -0.38
PCDHGC3-201ENST00000308177 KIAA1024Q9UPX6 916 aa12.67□□□□□ -0.38
PCDHGC3-201ENST00000308177 PCDHB13Q9Y5F0 798 aa12.67□□□□□ -0.38
PCDHGC3-201ENST00000308177 TMEM110-MUSTN1A8MSY1 372 aa12.67□□□□□ -0.38
PCDHGC3-201ENST00000308177 STX10O60499 249 aa12.67□□□□□ -0.38
PCDHGC3-201ENST00000308177 COBLO75128 1261 aa12.67□□□□□ -0.38
PCDHGC3-201ENST00000308177 TNFAIP3P21580 790 aa12.67□□□□□ -0.38
PCDHGC3-201ENST00000308177 GPSM2P81274 684 aa12.67□□□□□ -0.38
PCDHGC3-201ENST00000308177 BIRC3Q13489 604 aa12.67□□□□□ -0.38
PCDHGC3-201ENST00000308177 TXNRD1Q16881 649 aa12.67□□□□□ -0.38
PCDHGC3-201ENST00000308177 DCAF15Q66K64 600 aa12.67□□□□□ -0.38
PCDHGC3-201ENST00000308177 MIER3Q7Z3K6 550 aa12.67□□□□□ -0.38
PCDHGC3-201ENST00000308177 FOXP4Q8IVH2 680 aaPredicted RBP12.67□□□□□ -0.38
PCDHGC3-201ENST00000308177 RGS22Q8NE09 1264 aa12.67□□□□□ -0.38
PCDHGC3-201ENST00000308177 NUCKS1Q9H1E3 243 aaKnown RBP12.67□□□□□ -0.38
PCDHGC3-201ENST00000308177 SH3GLB2Q9NR46 395 aa12.67□□□□□ -0.38
PCDHGC3-201ENST00000308177 BMP3P12645 472 aa12.67□□□□□ -0.38
PCDHGC3-201ENST00000308177 VAV2P52735 878 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms