RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 SPZ1Q9BXG8 430 aa28.43■■■□□ 2.14
HOXC9-201ENST00000303450 TEX13BQ9BXU2 312 aa28.43■■■□□ 2.14
HOXC9-201ENST00000303450 SLKQ9H2G2 1235 aaPredicted RBP28.43■■■□□ 2.14
HOXC9-201ENST00000303450 RIOX1Q9H6W3 641 aa28.43■■■□□ 2.14
HOXC9-201ENST00000303450 FAM217BQ9NTX9 383 aaPredicted RBP28.43■■■□□ 2.14
HOXC9-201ENST00000303450 ATP2A1O14983 1001 aa28.42■■■□□ 2.14
HOXC9-201ENST00000303450 CYTH3O43739 400 aa28.42■■■□□ 2.14
HOXC9-201ENST00000303450 KIF22Q14807 665 aa28.42■■■□□ 2.14
HOXC9-201ENST00000303450 CDC37Q16543 378 aaPredicted RBP28.42■■■□□ 2.14
HOXC9-201ENST00000303450 CCDC82Q8N4S0 544 aa28.42■■■□□ 2.14
HOXC9-201ENST00000303450 LIMCH1Q9UPQ0 1083 aa28.42■■■□□ 2.14
HOXC9-201ENST00000303450 SLC4A3P48751 1232 aa28.41■■■□□ 2.14
HOXC9-201ENST00000303450 LACTBP83111 547 aaPredicted RBP28.41■■■□□ 2.14
HOXC9-201ENST00000303450 SLC35G1Q2M3R5 365 aa28.41■■■□□ 2.14
HOXC9-201ENST00000303450 SNRNP48Q6IEG0 339 aaKnown RBP28.41■■■□□ 2.14
HOXC9-201ENST00000303450 MOV10L1Q9BXT6 1211 aaKnown RBP28.41■■■□□ 2.14
HOXC9-201ENST00000303450 NCOA5Q9HCD5 579 aaKnown RBP28.41■■■□□ 2.14
HOXC9-201ENST00000303450 ECM2O94769 699 aaPredicted RBP28.4■■■□□ 2.14
HOXC9-201ENST00000303450 LBX1P52954 281 aa28.4■■■□□ 2.14
HOXC9-201ENST00000303450 HOMER1Q86YM7 354 aa28.4■■■□□ 2.14
HOXC9-201ENST00000303450 ZNF536O15090 1300 aa28.4■■■□□ 2.14
HOXC9-201ENST00000303450 PFKFB2O60825 505 aa28.39■■■□□ 2.14
HOXC9-201ENST00000303450 ICAM1P05362 532 aa28.39■■■□□ 2.14
HOXC9-201ENST00000303450 ME3Q16798 604 aa28.39■■■□□ 2.14
HOXC9-201ENST00000303450 RIOX2Q8IUF8 465 aa28.39■■■□□ 2.14
HOXC9-201ENST00000303450 PIBF1Q8WXW3 757 aa28.39■■■□□ 2.14
HOXC9-201ENST00000303450 ERO1AQ96HE7 468 aa28.39■■■□□ 2.14
HOXC9-201ENST00000303450 AGBL1Q96MI9 1066 aa28.39■■■□□ 2.14
HOXC9-201ENST00000303450 PIGSQ96S52 555 aa28.39■■■□□ 2.14
HOXC9-201ENST00000303450 CCPG1Q9ULG6 757 aa28.39■■■□□ 2.14
HOXC9-201ENST00000303450 MYH6P13533 1939 aa28.39■■■□□ 2.13
HOXC9-201ENST00000303450 SLC25A27O95847 323 aa28.38■■■□□ 2.13
HOXC9-201ENST00000303450 QRICH1Q2TAL8 776 aa28.38■■■□□ 2.13
HOXC9-201ENST00000303450 WDR78Q5VTH9 848 aa28.38■■■□□ 2.13
HOXC9-201ENST00000303450 NCAPG2Q86XI2 1143 aa28.38■■■□□ 2.13
HOXC9-201ENST00000303450 CD99L2Q8TCZ2 262 aa28.38■■■□□ 2.13
HOXC9-201ENST00000303450 MTMR8Q96EF0 704 aa28.38■■■□□ 2.13
HOXC9-201ENST00000303450 RRP36Q96EU6 259 aaKnown RBP28.38■■■□□ 2.13
HOXC9-201ENST00000303450 PORCNQ9H237 461 aa28.38■■■□□ 2.13
HOXC9-201ENST00000303450 CWC22Q9HCG8 908 aaKnown RBP28.38■■■□□ 2.13
HOXC9-201ENST00000303450 PNMA2Q9UL42 364 aa28.38■■■□□ 2.13
HOXC9-201ENST00000303450 CPLX1O14810 134 aa28.38■■■□□ 2.13
HOXC9-201ENST00000303450 ZBTB5O15062 677 aa28.38■■■□□ 2.13
HOXC9-201ENST00000303450 MAPK4P31152 587 aa28.38■■■□□ 2.13
HOXC9-201ENST00000303450 COPB2P35606 906 aa28.38■■■□□ 2.13
HOXC9-201ENST00000303450 SHCBP1Q8NEM2 672 aa28.38■■■□□ 2.13
HOXC9-201ENST00000303450 EFCC1Q9HA90 598 aa28.38■■■□□ 2.13
HOXC9-201ENST00000303450 SEC63Q9UGP8 760 aaKnown RBP28.38■■■□□ 2.13
HOXC9-201ENST00000303450 ERCC3P19447 782 aa28.37■■■□□ 2.13
HOXC9-201ENST00000303450 PSMC4P43686 418 aa28.37■■■□□ 2.13
HOXC9-201ENST00000303450 FCGRTP55899 365 aa28.37■■■□□ 2.13
HOXC9-201ENST00000303450 SCRN1Q12765 414 aa28.37■■■□□ 2.13
HOXC9-201ENST00000303450 ZSCAN31Q96LW9 406 aaPredicted RBP28.37■■■□□ 2.13
HOXC9-201ENST00000303450 CASP8AP2Q9UKL3 1982 aa28.36■■■□□ 2.13
HOXC9-201ENST00000303450 PNMA6FA0A0J9YX94 578 aa28.36■■■□□ 2.13
HOXC9-201ENST00000303450 LARGE1O95461 756 aa28.36■■■□□ 2.13
HOXC9-201ENST00000303450 FMNL1O95466 1100 aaPredicted RBP28.36■■■□□ 2.13
HOXC9-201ENST00000303450 MCM2P49736 904 aa28.36■■■□□ 2.13
HOXC9-201ENST00000303450 FUT2Q10981 343 aa28.36■■■□□ 2.13
HOXC9-201ENST00000303450 CPLX2Q6PUV4 134 aaKnown RBP28.36■■■□□ 2.13
HOXC9-201ENST00000303450 ARHGAP39Q9C0H5 1083 aa28.36■■■□□ 2.13
HOXC9-201ENST00000303450 MROH8Q9H579 483 aa28.36■■■□□ 2.13
HOXC9-201ENST00000303450 RIPK3Q9Y572 518 aa28.36■■■□□ 2.13
HOXC9-201ENST00000303450 CNTNAP5Q8WYK1 1306 aa28.36■■■□□ 2.13
HOXC9-201ENST00000303450 ALAS1P13196 640 aa28.35■■■□□ 2.13
HOXC9-201ENST00000303450 ARHGEF6Q15052 776 aa28.35■■■□□ 2.13
HOXC9-201ENST00000303450 FBXO11Q86XK2 927 aa28.35■■■□□ 2.13
HOXC9-201ENST00000303450 NECAB1Q8N987 351 aa28.35■■■□□ 2.13
HOXC9-201ENST00000303450 AMNQ9BXJ7 453 aa28.35■■■□□ 2.13
HOXC9-201ENST00000303450 HOMER2Q9NSB8 354 aa28.35■■■□□ 2.13
HOXC9-201ENST00000303450 TNPO2O14787 897 aaKnown RBP28.34■■■□□ 2.13
HOXC9-201ENST00000303450 TKFCQ3LXA3 575 aa28.34■■■□□ 2.13
HOXC9-201ENST00000303450 USH1GQ495M9 461 aa28.34■■■□□ 2.13
HOXC9-201ENST00000303450 GTF3C6Q969F1 213 aa28.34■■■□□ 2.13
HOXC9-201ENST00000303450 TRIM47Q96LD4 638 aa28.34■■■□□ 2.13
HOXC9-201ENST00000303450 SH2B1Q9NRF2 756 aaPredicted RBP28.34■■■□□ 2.13
HOXC9-201ENST00000303450 MGAMO43451 1857 aa28.34■■■□□ 2.13
HOXC9-201ENST00000303450 hCG_1642624A0A1W2PR95 340 aa28.33■■■□□ 2.13
HOXC9-201ENST00000303450 CD2BP2O95400 341 aaKnown RBP28.33■■■□□ 2.13
HOXC9-201ENST00000303450 IFNAR1P17181 557 aa28.33■■■□□ 2.13
HOXC9-201ENST00000303450 CTGFP29279 349 aa28.33■■■□□ 2.13
HOXC9-201ENST00000303450 NTRK3Q16288 839 aa28.33■■■□□ 2.13
HOXC9-201ENST00000303450 GPR142Q7Z601 462 aa28.33■■■□□ 2.13
HOXC9-201ENST00000303450 TRERF1Q96PN7 1200 aa28.33■■■□□ 2.13
HOXC9-201ENST00000303450 V9GY48 417 aaPredicted RBP28.33■■■□□ 2.13
HOXC9-201ENST00000303450 SMCHD1A6NHR9 2005 aa28.33■■■□□ 2.13
HOXC9-201ENST00000303450 TAL1P17542 331 aaPredicted RBP28.33■■■□□ 2.13
HOXC9-201ENST00000303450 TRAF1Q13077 416 aa28.33■■■□□ 2.13
HOXC9-201ENST00000303450 PLEKHH3Q7Z736 793 aa28.33■■■□□ 2.13
HOXC9-201ENST00000303450 CHST13Q8NET6 341 aa28.33■■■□□ 2.13
HOXC9-201ENST00000303450 PHKBQ93100 1093 aa28.33■■■□□ 2.13
HOXC9-201ENST00000303450 COA7Q96BR5 231 aa28.33■■■□□ 2.13
HOXC9-201ENST00000303450 RNF146Q9NTX7 359 aa28.33■■■□□ 2.13
HOXC9-201ENST00000303450 FBXO40Q9UH90 709 aa28.33■■■□□ 2.13
HOXC9-201ENST00000303450 IVNS1ABPQ9Y6Y0 642 aa28.33■■■□□ 2.13
HOXC9-201ENST00000303450 CDKL5O76039 1030 aa28.32■■■□□ 2.12
HOXC9-201ENST00000303450 AKAP17AQ02040 695 aaKnown RBP28.32■■■□□ 2.12
HOXC9-201ENST00000303450 PCDHA1Q9Y5I3 950 aa28.32■■■□□ 2.12
HOXC9-201ENST00000303450 ZSWIM8A7E2V4 1837 aa28.31■■■□□ 2.12
HOXC9-201ENST00000303450 PPP1R11O60927 126 aaPredicted RBP28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms