RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 SERTAD1Q9UHV2 236 aa16.5■□□□□ 0.23
SHCBP1-201ENST00000303383 ESYT2A0FGR8 921 aa16.49■□□□□ 0.23
SHCBP1-201ENST00000303383 SHTN1A0MZ66 631 aa16.49■□□□□ 0.23
SHCBP1-201ENST00000303383 BMP3P12645 472 aa16.49■□□□□ 0.23
SHCBP1-201ENST00000303383 PTGER2P43116 358 aa16.49■□□□□ 0.23
SHCBP1-201ENST00000303383 DTHD1Q6ZMT9 781 aa16.49■□□□□ 0.23
SHCBP1-201ENST00000303383 ARHGAP27Q6ZUM4 889 aa16.49■□□□□ 0.23
SHCBP1-201ENST00000303383 C11orf57Q6ZUT1 292 aaPredicted RBP16.49■□□□□ 0.23
SHCBP1-201ENST00000303383 EPSTI1Q96J88 318 aa16.49■□□□□ 0.23
SHCBP1-201ENST00000303383 SPON1Q9HCB6 807 aa16.49■□□□□ 0.23
SHCBP1-201ENST00000303383 TMEM232C9JQI7 657 aa16.49■□□□□ 0.23
SHCBP1-201ENST00000303383 NDUFB10O96000 172 aa16.49■□□□□ 0.23
SHCBP1-201ENST00000303383 TBC1D10BQ4KMP7 808 aaPredicted RBP16.49■□□□□ 0.23
SHCBP1-201ENST00000303383 NEK8Q86SG6 692 aa16.49■□□□□ 0.23
SHCBP1-201ENST00000303383 SPICE1Q8N0Z3 855 aa16.49■□□□□ 0.23
SHCBP1-201ENST00000303383 CUL5Q93034 780 aa16.49■□□□□ 0.23
SHCBP1-201ENST00000303383 NUP88Q99567 741 aaPredicted RBP16.49■□□□□ 0.23
SHCBP1-201ENST00000303383 GOPCQ9HD26 462 aa16.49■□□□□ 0.23
SHCBP1-201ENST00000303383 CNOT7Q9UIV1 285 aaKnown RBP16.49■□□□□ 0.23
SHCBP1-201ENST00000303383 TPM4P67936 248 aa16.49■□□□□ 0.23
SHCBP1-201ENST00000303383 RASA3Q14644 834 aa16.49■□□□□ 0.23
SHCBP1-201ENST00000303383 ARL6IP4Q66PJ3 421 aaKnown RBP16.49■□□□□ 0.23
SHCBP1-201ENST00000303383 PPP1R18Q6NYC8 613 aa16.49■□□□□ 0.23
SHCBP1-201ENST00000303383 PDLIM2Q96JY6 352 aa16.49■□□□□ 0.23
SHCBP1-201ENST00000303383 SCAF8Q9UPN6 1271 aaKnown RBP16.49■□□□□ 0.23
SHCBP1-201ENST00000303383 MORC2Q9Y6X9 1032 aaPredicted RBP16.49■□□□□ 0.23
SHCBP1-201ENST00000303383 LTBP3Q9NS15 1303 aa16.48■□□□□ 0.23
SHCBP1-201ENST00000303383 TULP1O00294 542 aaPredicted RBP16.48■□□□□ 0.23
SHCBP1-201ENST00000303383 SAMD1Q6SPF0 538 aaPredicted RBP16.48■□□□□ 0.23
SHCBP1-201ENST00000303383 USP49Q70CQ1 688 aa16.48■□□□□ 0.23
SHCBP1-201ENST00000303383 GMCL1P1Q8NEA9 526 aa16.48■□□□□ 0.23
SHCBP1-201ENST00000303383 TRIM5Q9C035 493 aa16.48■□□□□ 0.23
SHCBP1-201ENST00000303383 SH2D4AQ9H788 454 aa16.48■□□□□ 0.23
SHCBP1-201ENST00000303383 ZBTB21Q9ULJ3 1066 aa16.48■□□□□ 0.23
SHCBP1-201ENST00000303383 CNTNAP1P78357 1384 aa16.48■□□□□ 0.23
SHCBP1-201ENST00000303383 H7C1D1 291 aa16.48■□□□□ 0.23
SHCBP1-201ENST00000303383 NLRP12P59046 1061 aa16.48■□□□□ 0.23
SHCBP1-201ENST00000303383 CDC37Q16543 378 aaPredicted RBP16.48■□□□□ 0.23
SHCBP1-201ENST00000303383 DRC7Q8IY82 874 aa16.48■□□□□ 0.23
SHCBP1-201ENST00000303383 TBCKQ8TEA7 893 aa16.48■□□□□ 0.23
SHCBP1-201ENST00000303383 PYM1Q9BRP8 204 aaKnown RBP16.48■□□□□ 0.23
SHCBP1-201ENST00000303383 CCDC39Q9UFE4 941 aa16.48■□□□□ 0.23
SHCBP1-201ENST00000303383 FER1L6Q2WGJ9 1857 aa16.48■□□□□ 0.23
SHCBP1-201ENST00000303383 M0R2N6 131 aa16.47■□□□□ 0.23
SHCBP1-201ENST00000303383 POSTNQ15063 836 aa16.47■□□□□ 0.23
SHCBP1-201ENST00000303383 SAMD7Q7Z3H4 446 aa16.47■□□□□ 0.23
SHCBP1-201ENST00000303383 FEZ1Q99689 392 aa16.47■□□□□ 0.23
SHCBP1-201ENST00000303383 PSTPIP2Q9H939 334 aa16.47■□□□□ 0.23
SHCBP1-201ENST00000303383 PCDHA1Q9Y5I3 950 aa16.47■□□□□ 0.23
SHCBP1-201ENST00000303383 SIPA1L1O43166 1804 aa16.47■□□□□ 0.23
SHCBP1-201ENST00000303383 ZYXQ15942 572 aaKnown RBP16.47■□□□□ 0.23
SHCBP1-201ENST00000303383 QRICH1Q2TAL8 776 aa16.47■□□□□ 0.23
SHCBP1-201ENST00000303383 SMARCE1Q969G3 411 aa16.47■□□□□ 0.23
SHCBP1-201ENST00000303383 GLT8D2Q9H1C3 349 aa16.47■□□□□ 0.23
SHCBP1-201ENST00000303383 TMEM260Q9NX78 707 aa16.47■□□□□ 0.23
SHCBP1-201ENST00000303383 MARCH6O60337 910 aa16.47■□□□□ 0.23
SHCBP1-201ENST00000303383 AOPEPQ8N6M6 819 aa16.47■□□□□ 0.23
SHCBP1-201ENST00000303383 DPF2Q92785 391 aa16.47■□□□□ 0.23
SHCBP1-201ENST00000303383 GMCL1Q96IK5 515 aa16.47■□□□□ 0.23
SHCBP1-201ENST00000303383 LAD1O00515 517 aa16.46■□□□□ 0.23
SHCBP1-201ENST00000303383 NEMFO60524 1076 aa16.46■□□□□ 0.23
SHCBP1-201ENST00000303383 SMC2O95347 1197 aa16.46■□□□□ 0.23
SHCBP1-201ENST00000303383 LONP1P36776 959 aaKnown RBP16.46■□□□□ 0.23
SHCBP1-201ENST00000303383 RRP1BQ14684 758 aaKnown RBP16.46■□□□□ 0.23
SHCBP1-201ENST00000303383 SYDE2Q5VT97 1194 aa16.46■□□□□ 0.23
SHCBP1-201ENST00000303383 SIAH1Q8IUQ4 282 aa16.46■□□□□ 0.23
SHCBP1-201ENST00000303383 MSNP26038 577 aaKnown RBP16.46■□□□□ 0.23
SHCBP1-201ENST00000303383 AFMP43652 599 aa16.46■□□□□ 0.23
SHCBP1-201ENST00000303383 DPCR1Q3MIW9 517 aa16.46■□□□□ 0.23
SHCBP1-201ENST00000303383 GLIPR1L2Q4G1C9 344 aa16.46■□□□□ 0.23
SHCBP1-201ENST00000303383 CDAN1Q8IWY9 1227 aa16.46■□□□□ 0.23
SHCBP1-201ENST00000303383 IQUBQ8NA54 791 aa16.46■□□□□ 0.23
SHCBP1-201ENST00000303383 RIC8AQ9NPQ8 531 aa16.46■□□□□ 0.23
SHCBP1-201ENST00000303383 TBC1D12O60347 775 aa16.46■□□□□ 0.22
SHCBP1-201ENST00000303383 ASNSP08243 561 aa16.46■□□□□ 0.22
SHCBP1-201ENST00000303383 UBA7P41226 1012 aa16.46■□□□□ 0.22
SHCBP1-201ENST00000303383 ECE1P42892 770 aa16.46■□□□□ 0.22
SHCBP1-201ENST00000303383 ZNF280AP59817 542 aaPredicted RBP16.46■□□□□ 0.22
SHCBP1-201ENST00000303383 JAG1P78504 1218 aa16.46■□□□□ 0.22
SHCBP1-201ENST00000303383 KIF4BQ2VIQ3 1234 aa16.46■□□□□ 0.22
SHCBP1-201ENST00000303383 PCDHA5Q9Y5H7 936 aa16.46■□□□□ 0.22
SHCBP1-201ENST00000303383 UBE2SQ16763 222 aa16.45■□□□□ 0.22
SHCBP1-201ENST00000303383 AMNQ9BXJ7 453 aa16.45■□□□□ 0.22
SHCBP1-201ENST00000303383 GOLGA6L6A8MZA4 724 aa16.45■□□□□ 0.22
SHCBP1-201ENST00000303383 CAP2P40123 477 aa16.45■□□□□ 0.22
SHCBP1-201ENST00000303383 USH1GQ495M9 461 aa16.45■□□□□ 0.22
SHCBP1-201ENST00000303383 FBXO11Q86XK2 927 aa16.45■□□□□ 0.22
SHCBP1-201ENST00000303383 ZBED3Q96IU2 234 aaPredicted RBP16.45■□□□□ 0.22
SHCBP1-201ENST00000303383 GREB1LQ9C091 1923 aaPredicted RBP16.45■□□□□ 0.22
SHCBP1-201ENST00000303383 FZD9O00144 591 aa16.44■□□□□ 0.22
SHCBP1-201ENST00000303383 OR52Z1P0C646 297 aa16.44■□□□□ 0.22
SHCBP1-201ENST00000303383 STAT2P52630 851 aa16.44■□□□□ 0.22
SHCBP1-201ENST00000303383 ACER1Q8TDN7 264 aa16.44■□□□□ 0.22
SHCBP1-201ENST00000303383 A0A1W2PRG0 241 aa16.44■□□□□ 0.22
SHCBP1-201ENST00000303383 SMTNL1A8MU46 457 aa16.44■□□□□ 0.22
SHCBP1-201ENST00000303383 SNAP25P60880 206 aa16.44■□□□□ 0.22
SHCBP1-201ENST00000303383 SYNPO2Q9UMS6 1093 aa16.44■□□□□ 0.22
SHCBP1-201ENST00000303383 BRCA1P38398 1863 aaKnown RBP16.44■□□□□ 0.22
SHCBP1-201ENST00000303383 FOXN1O15353 648 aa16.44■□□□□ 0.22
SHCBP1-201ENST00000303383 SLFN14P0C7P3 912 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms