RNA–Protein interactions for RNA: ENST00000302631.7

SCAMP3-201, Transcript of secretory carrier membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP3, Length 1,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-201ENST00000302631 IFNAR1P17181 557 aa23.25■■□□□ 1.31
SCAMP3-201ENST00000302631 ST3GAL1Q11201 340 aa23.25■■□□□ 1.31
SCAMP3-201ENST00000302631 STK3Q13188 491 aa23.25■■□□□ 1.31
SCAMP3-201ENST00000302631 SAMD1Q6SPF0 538 aaPredicted RBP23.25■■□□□ 1.31
SCAMP3-201ENST00000302631 NOL8Q76FK4 1167 aaKnown RBP23.25■■□□□ 1.31
SCAMP3-201ENST00000302631 CMTR1Q8N1G2 835 aaKnown RBP23.25■■□□□ 1.31
SCAMP3-201ENST00000302631 SNX21Q969T3 373 aa23.25■■□□□ 1.31
SCAMP3-201ENST00000302631 SPATC1LQ9H0A9 340 aa23.25■■□□□ 1.31
SCAMP3-201ENST00000302631 ZBTB5O15062 677 aa23.25■■□□□ 1.31
SCAMP3-201ENST00000302631 CDC37Q16543 378 aaPredicted RBP23.25■■□□□ 1.31
SCAMP3-201ENST00000302631 RIOX2Q8IUF8 465 aa23.25■■□□□ 1.31
SCAMP3-201ENST00000302631 PAGR1Q9BTK6 254 aa23.25■■□□□ 1.31
SCAMP3-201ENST00000302631 VAT1LQ9HCJ6 419 aa23.25■■□□□ 1.31
SCAMP3-201ENST00000302631 PNMA2Q9UL42 364 aa23.25■■□□□ 1.31
SCAMP3-201ENST00000302631 ICAM1P05362 532 aa23.24■■□□□ 1.31
SCAMP3-201ENST00000302631 STAT3P40763 770 aa23.24■■□□□ 1.31
SCAMP3-201ENST00000302631 SNAP25P60880 206 aa23.24■■□□□ 1.31
SCAMP3-201ENST00000302631 QRICH1Q2TAL8 776 aa23.24■■□□□ 1.31
SCAMP3-201ENST00000302631 SHCBP1Q8NEM2 672 aa23.24■■□□□ 1.31
SCAMP3-201ENST00000302631 PIGSQ96S52 555 aa23.24■■□□□ 1.31
SCAMP3-201ENST00000302631 MOV10L1Q9BXT6 1211 aaKnown RBP23.24■■□□□ 1.31
SCAMP3-201ENST00000302631 TEX13BQ9BXU2 312 aa23.24■■□□□ 1.31
SCAMP3-201ENST00000302631 DOCK3Q8IZD9 2030 aa23.23■■□□□ 1.31
SCAMP3-201ENST00000302631 PNMA6FA0A0J9YX94 578 aa23.23■■□□□ 1.31
SCAMP3-201ENST00000302631 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.23■■□□□ 1.31
SCAMP3-201ENST00000302631 NECAB1Q8N987 351 aa23.23■■□□□ 1.31
SCAMP3-201ENST00000302631 RAVER2Q9HCJ3 691 aaKnown RBP23.23■■□□□ 1.31
SCAMP3-201ENST00000302631 PRPF3O43395 683 aaKnown RBP23.22■■□□□ 1.31
SCAMP3-201ENST00000302631 DHX16O60231 1041 aaKnown RBP23.22■■□□□ 1.31
SCAMP3-201ENST00000302631 CTDNEP1O95476 244 aa23.22■■□□□ 1.31
SCAMP3-201ENST00000302631 SLC25A27O95847 323 aa23.22■■□□□ 1.31
SCAMP3-201ENST00000302631 SP3Q02447 781 aa23.22■■□□□ 1.31
SCAMP3-201ENST00000302631 RRP36Q96EU6 259 aaKnown RBP23.22■■□□□ 1.31
SCAMP3-201ENST00000302631 TMX3Q96JJ7 454 aa23.22■■□□□ 1.31
SCAMP3-201ENST00000302631 AGBL1Q96MI9 1066 aa23.22■■□□□ 1.31
SCAMP3-201ENST00000302631 RNF26Q9BY78 433 aaPredicted RBP23.22■■□□□ 1.31
SCAMP3-201ENST00000302631 RIPK3Q9Y572 518 aa23.22■■□□□ 1.31
SCAMP3-201ENST00000302631 CTDP1Q9Y5B0 961 aaPredicted RBP23.22■■□□□ 1.31
SCAMP3-201ENST00000302631 PPP1R11O60927 126 aaPredicted RBP23.21■■□□□ 1.31
SCAMP3-201ENST00000302631 HSPA1AP0DMV8 641 aaKnown RBP23.21■■□□□ 1.31
SCAMP3-201ENST00000302631 HSPA1BP0DMV9 641 aaKnown RBP23.21■■□□□ 1.31
SCAMP3-201ENST00000302631 COPB2P35606 906 aa23.21■■□□□ 1.31
SCAMP3-201ENST00000302631 CCNA1P78396 465 aa23.21■■□□□ 1.31
SCAMP3-201ENST00000302631 TKFCQ3LXA3 575 aa23.21■■□□□ 1.31
SCAMP3-201ENST00000302631 SNRNP48Q6IEG0 339 aaKnown RBP23.21■■□□□ 1.31
SCAMP3-201ENST00000302631 CCDC174Q6PII3 467 aa23.21■■□□□ 1.31
SCAMP3-201ENST00000302631 CPXCR1Q8N123 301 aa23.21■■□□□ 1.31
SCAMP3-201ENST00000302631 CCDC82Q8N4S0 544 aa23.21■■□□□ 1.31
SCAMP3-201ENST00000302631 PORCNQ9H237 461 aa23.21■■□□□ 1.31
SCAMP3-201ENST00000302631 ZNFX1Q9P2E3 1918 aaKnown RBP23.21■■□□□ 1.31
SCAMP3-201ENST00000302631 FOXN1O15353 648 aa23.2■■□□□ 1.3
SCAMP3-201ENST00000302631 LACTBP83111 547 aaPredicted RBP23.2■■□□□ 1.3
SCAMP3-201ENST00000302631 CPLX2Q6PUV4 134 aaKnown RBP23.2■■□□□ 1.3
SCAMP3-201ENST00000302631 AMNQ9BXJ7 453 aa23.2■■□□□ 1.3
SCAMP3-201ENST00000302631 RBM27Q9P2N5 1060 aaKnown RBP23.2■■□□□ 1.3
SCAMP3-201ENST00000302631 V9GY48 417 aaPredicted RBP23.2■■□□□ 1.3
SCAMP3-201ENST00000302631 CPLX1O14810 134 aa23.19■■□□□ 1.3
SCAMP3-201ENST00000302631 FKTNO75072 461 aa23.19■■□□□ 1.3
SCAMP3-201ENST00000302631 FMNL1O95466 1100 aaPredicted RBP23.19■■□□□ 1.3
SCAMP3-201ENST00000302631 HSPA8P11142 646 aaKnown RBP23.19■■□□□ 1.3
SCAMP3-201ENST00000302631 CTGFP29279 349 aa23.19■■□□□ 1.3
SCAMP3-201ENST00000302631 PLS1Q14651 629 aa23.19■■□□□ 1.3
SCAMP3-201ENST00000302631 FBXO11Q86XK2 927 aa23.19■■□□□ 1.3
SCAMP3-201ENST00000302631 ZNF296Q8WUU4 475 aaPredicted RBP23.19■■□□□ 1.3
SCAMP3-201ENST00000302631 MROH8Q9H579 483 aa23.19■■□□□ 1.3
SCAMP3-201ENST00000302631 TSKSQ9UJT2 592 aa23.19■■□□□ 1.3
SCAMP3-201ENST00000302631 CCPG1Q9ULG6 757 aa23.19■■□□□ 1.3
SCAMP3-201ENST00000302631 ZSWIM8A7E2V4 1837 aa23.18■■□□□ 1.3
SCAMP3-201ENST00000302631 CDKL5O76039 1030 aa23.18■■□□□ 1.3
SCAMP3-201ENST00000302631 ERCC3P19447 782 aa23.18■■□□□ 1.3
SCAMP3-201ENST00000302631 MAPK4P31152 587 aa23.18■■□□□ 1.3
SCAMP3-201ENST00000302631 TRAF1Q13077 416 aa23.18■■□□□ 1.3
SCAMP3-201ENST00000302631 PKN1Q16512 942 aa23.18■■□□□ 1.3
SCAMP3-201ENST00000302631 HOMER1Q86YM7 354 aa23.18■■□□□ 1.3
SCAMP3-201ENST00000302631 NSUN7Q8NE18 718 aaKnown RBP23.18■■□□□ 1.3
SCAMP3-201ENST00000302631 CHST13Q8NET6 341 aa23.18■■□□□ 1.3
SCAMP3-201ENST00000302631 PHKBQ93100 1093 aa23.18■■□□□ 1.3
SCAMP3-201ENST00000302631 LLPHQ9BRT6 129 aaKnown RBP23.18■■□□□ 1.3
SCAMP3-201ENST00000302631 EFCC1Q9HA90 598 aa23.18■■□□□ 1.3
SCAMP3-201ENST00000302631 STK36Q9NRP7 1315 aa23.18■■□□□ 1.3
SCAMP3-201ENST00000302631 CAP1Q01518 475 aa23.17■■□□□ 1.3
SCAMP3-201ENST00000302631 CUL4AQ13619 759 aa23.17■■□□□ 1.3
SCAMP3-201ENST00000302631 CCDC83Q8IWF9 413 aa23.17■■□□□ 1.3
SCAMP3-201ENST00000302631 MAF1Q9H063 256 aa23.17■■□□□ 1.3
SCAMP3-201ENST00000302631 SEC63Q9UGP8 760 aaKnown RBP23.17■■□□□ 1.3
SCAMP3-201ENST00000302631 PLXNB2O15031 1838 aa23.17■■□□□ 1.3
SCAMP3-201ENST00000302631 ABCB11O95342 1321 aa23.17■■□□□ 1.3
SCAMP3-201ENST00000302631 CASP8AP2Q9UKL3 1982 aa23.17■■□□□ 1.3
SCAMP3-201ENST00000302631 CTCFP49711 727 aaPredicted RBP23.16■■□□□ 1.3
SCAMP3-201ENST00000302631 SSRP1Q08945 709 aaKnown RBP23.16■■□□□ 1.3
SCAMP3-201ENST00000302631 PFKFB3Q16875 520 aaPredicted RBP23.16■■□□□ 1.3
SCAMP3-201ENST00000302631 SMARCC2Q8TAQ2 1214 aa23.16■■□□□ 1.3
SCAMP3-201ENST00000302631 CLEC4DQ8WXI8 215 aa23.16■■□□□ 1.3
SCAMP3-201ENST00000302631 SLC26A6Q9BXS9 759 aa23.16■■□□□ 1.3
SCAMP3-201ENST00000302631 ZNF236Q9UL36 1845 aa23.16■■□□□ 1.3
SCAMP3-201ENST00000302631 hCG_1642624A0A1W2PR95 340 aa23.16■■□□□ 1.3
SCAMP3-201ENST00000302631 hCG_1984214I3L0E3 225 aa23.16■■□□□ 1.3
SCAMP3-201ENST00000302631 GPR142Q7Z601 462 aa23.16■■□□□ 1.3
SCAMP3-201ENST00000302631 ZNF713Q8N859 430 aaPredicted RBP23.16■■□□□ 1.3
SCAMP3-201ENST00000302631 RGS22Q8NE09 1264 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms