RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 MGARPQ8TDB4 240 aa8.36□□□□□ -1.07
SF3B3-201ENST00000302516 JARID2Q92833 1246 aaPredicted RBP8.36□□□□□ -1.07
SF3B3-201ENST00000302516 EFHD1Q9BUP0 239 aa8.36□□□□□ -1.07
SF3B3-201ENST00000302516 TXKP42681 527 aa8.36□□□□□ -1.07
SF3B3-201ENST00000302516 RPS6KA2Q15349 733 aa8.36□□□□□ -1.07
SF3B3-201ENST00000302516 HACE1Q8IYU2 909 aa8.36□□□□□ -1.07
SF3B3-201ENST00000302516 NRBF2Q96F24 287 aa8.36□□□□□ -1.07
SF3B3-201ENST00000302516 NGLY1Q96IV0 654 aa8.36□□□□□ -1.07
SF3B3-201ENST00000302516 RABEP2Q9H5N1 569 aa8.36□□□□□ -1.07
SF3B3-201ENST00000302516 ZBTB21Q9ULJ3 1066 aa8.36□□□□□ -1.07
SF3B3-201ENST00000302516 CHMP2AO43633 222 aa8.36□□□□□ -1.07
SF3B3-201ENST00000302516 U2AF1L4Q8WU68 220 aaKnown RBP8.36□□□□□ -1.07
SF3B3-201ENST00000302516 FOXP1Q9H334 677 aaPredicted RBP8.36□□□□□ -1.07
SF3B3-201ENST00000302516 EPN1Q9Y6I3 576 aaPredicted RBP8.36□□□□□ -1.07
SF3B3-201ENST00000302516 CDK12Q9NYV4 1490 aaPredicted RBP8.36□□□□□ -1.07
SF3B3-201ENST00000302516 ESRRGP62508 458 aa8.36□□□□□ -1.07
SF3B3-201ENST00000302516 KRT26Q7Z3Y9 468 aa8.36□□□□□ -1.07
SF3B3-201ENST00000302516 CCDC124Q96CT7 223 aaKnown RBP8.36□□□□□ -1.07
SF3B3-201ENST00000302516 SCOCQ9UIL1 159 aa8.36□□□□□ -1.07
SF3B3-201ENST00000302516 ZNF608Q9ULD9 1512 aaPredicted RBP8.36□□□□□ -1.07
SF3B3-201ENST00000302516 ATF7P17544 494 aaPredicted RBP8.36□□□□□ -1.07
SF3B3-201ENST00000302516 SLC1A4P43007 532 aa8.36□□□□□ -1.07
SF3B3-201ENST00000302516 AOC3Q16853 763 aa8.36□□□□□ -1.07
SF3B3-201ENST00000302516 LONRF3Q496Y0 759 aa8.36□□□□□ -1.07
SF3B3-201ENST00000302516 GPBP1Q86WP2 473 aa8.36□□□□□ -1.07
SF3B3-201ENST00000302516 STK17AQ9UEE5 414 aa8.36□□□□□ -1.07
SF3B3-201ENST00000302516 ATP5HO75947 161 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 CLTAP09496 248 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 GABPAQ06546 454 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 RSPH3Q86UC2 560 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 BLIDQ8IZY5 108 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 ARMT1Q9H993 441 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 SMIM24O75264 130 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 TTC4O95801 387 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 SKIP12755 728 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 CPA1P15085 419 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 KPNA2P52292 529 aaKnown RBP8.35□□□□□ -1.07
SF3B3-201ENST00000302516 SRRM1Q8IYB3 904 aaKnown RBP8.35□□□□□ -1.07
SF3B3-201ENST00000302516 CNPY4Q8N129 248 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 PHKBQ93100 1093 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 LRGUKQ96M69 825 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 SRGAP2BP0DMP2 458 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 PPARAQ07869 468 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 DMP1Q13316 513 aaPredicted RBP8.35□□□□□ -1.07
SF3B3-201ENST00000302516 TMTC3Q6ZXV5 915 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.35□□□□□ -1.07
SF3B3-201ENST00000302516 OR52Z1P0C646 297 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 LIG3P49916 1009 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 TRIM50Q86XT4 487 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 GPCPD1Q9NPB8 672 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 PGRMC1O00264 195 aaKnown RBP8.35□□□□□ -1.07
SF3B3-201ENST00000302516 NOP56O00567 594 aaKnown RBP8.35□□□□□ -1.07
SF3B3-201ENST00000302516 SERPINB6P35237 376 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 SLC39A6Q13433 755 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 GLE1Q53GS7 698 aaKnown RBP8.35□□□□□ -1.07
SF3B3-201ENST00000302516 BANK1Q8NDB2 785 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 POLR2BP30876 1174 aaKnown RBP8.35□□□□□ -1.07
SF3B3-201ENST00000302516 HIBADHP31937 336 aaKnown RBP8.35□□□□□ -1.07
SF3B3-201ENST00000302516 PDE1CQ14123 709 aaPredicted RBP8.35□□□□□ -1.07
SF3B3-201ENST00000302516 EMBQ6PCB8 327 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 ZNF654Q8IZM8 581 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 CNBD1Q8NA66 436 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 TRIM6Q9C030 488 aaPredicted RBP8.35□□□□□ -1.07
SF3B3-201ENST00000302516 AZI2Q9H6S1 392 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 IFT122Q9HBG6 1241 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 TPX2Q9ULW0 747 aaKnown RBP8.35□□□□□ -1.07
SF3B3-201ENST00000302516 MTMR6Q9Y217 621 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 USP19O94966 1318 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 NR1H3Q13133 447 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 GCKRQ14397 625 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 CCDC68Q9H2F9 335 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 BAG5Q9UL15 447 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 MAPK8IP1Q9UQF2 711 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 TSPOAP1O95153 1857 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 ZNF532Q9HCE3 1301 aa8.35□□□□□ -1.07
SF3B3-201ENST00000302516 ERCC3P19447 782 aa8.34□□□□□ -1.07
SF3B3-201ENST00000302516 OTUD7AQ8TE49 926 aaPredicted RBP8.34□□□□□ -1.07
SF3B3-201ENST00000302516 SLC52A2Q9HAB3 445 aa8.34□□□□□ -1.07
SF3B3-201ENST00000302516 DIS3Q9Y2L1 958 aaKnown RBP8.34□□□□□ -1.07
SF3B3-201ENST00000302516 ERBB4Q15303 1308 aa8.34□□□□□ -1.07
SF3B3-201ENST00000302516 GAS7O60861 476 aa8.34□□□□□ -1.07
SF3B3-201ENST00000302516 ATP1A2P50993 1020 aa8.34□□□□□ -1.07
SF3B3-201ENST00000302516 PLCB4Q15147 1175 aa8.34□□□□□ -1.07
SF3B3-201ENST00000302516 DESI2Q9BSY9 194 aa8.34□□□□□ -1.07
SF3B3-201ENST00000302516 INTS9Q9NV88 658 aaKnown RBP8.34□□□□□ -1.07
SF3B3-201ENST00000302516 PANK4Q9NVE7 773 aa8.34□□□□□ -1.07
SF3B3-201ENST00000302516 RWDD2AQ9UIY3 292 aa8.34□□□□□ -1.07
SF3B3-201ENST00000302516 COL4A3BPQ9Y5P4 624 aa8.34□□□□□ -1.07
SF3B3-201ENST00000302516 GAP43P17677 238 aa8.34□□□□□ -1.07
SF3B3-201ENST00000302516 ANKRD42Q8N9B4 389 aa8.34□□□□□ -1.07
SF3B3-201ENST00000302516 PARP3Q9Y6F1 533 aa8.34□□□□□ -1.07
SF3B3-201ENST00000302516 HECW2Q9P2P5 1572 aa8.34□□□□□ -1.07
SF3B3-201ENST00000302516 SSH3Q8TE77 659 aa8.34□□□□□ -1.07
SF3B3-201ENST00000302516 PLEKHG1Q9ULL1 1385 aa8.34□□□□□ -1.07
SF3B3-201ENST00000302516 PFDN1O60925 122 aa8.34□□□□□ -1.07
SF3B3-201ENST00000302516 COPB1P53618 953 aaKnown RBP8.34□□□□□ -1.07
SF3B3-201ENST00000302516 ZKSCAN8Q15776 578 aaPredicted RBP8.34□□□□□ -1.07
SF3B3-201ENST00000302516 DDB1Q16531 1140 aa8.34□□□□□ -1.07
SF3B3-201ENST00000302516 EYA1Q99502 592 aa8.34□□□□□ -1.07
SF3B3-201ENST00000302516 PCDHA7Q9UN72 937 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms