RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 ZBTB5O15062 677 aa11□□□□□ -0.65
RFX3-201ENST00000302303 DHX16O60231 1041 aaKnown RBP11□□□□□ -0.65
RFX3-201ENST00000302303 DDIT3P35638 169 aa11□□□□□ -0.65
RFX3-201ENST00000302303 QRICH1Q2TAL8 776 aa11□□□□□ -0.65
RFX3-201ENST00000302303 Q3C1V9 767 aa11□□□□□ -0.65
RFX3-201ENST00000302303 PIBF1Q8WXW3 757 aa11□□□□□ -0.65
RFX3-201ENST00000302303 DDX11Q96FC9 970 aa11□□□□□ -0.65
RFX3-201ENST00000302303 SLC26A6Q9BXS9 759 aa11□□□□□ -0.65
RFX3-201ENST00000302303 HOXC10Q9NYD6 342 aa11□□□□□ -0.65
RFX3-201ENST00000302303 RIPK3Q9Y572 518 aa11□□□□□ -0.65
RFX3-201ENST00000302303 THSD7BQ9C0I4 1608 aa11□□□□□ -0.65
RFX3-201ENST00000302303 PNMA6FA0A0J9YX94 578 aa10.99□□□□□ -0.65
RFX3-201ENST00000302303 ATP2A1O14983 1001 aa10.99□□□□□ -0.65
RFX3-201ENST00000302303 MAP2K2P36507 400 aa10.99□□□□□ -0.65
RFX3-201ENST00000302303 GRM1Q13255 1194 aa10.99□□□□□ -0.65
RFX3-201ENST00000302303 NPY5RQ15761 445 aa10.99□□□□□ -0.65
RFX3-201ENST00000302303 CDC37Q16543 378 aaPredicted RBP10.99□□□□□ -0.65
RFX3-201ENST00000302303 PFKFB3Q16875 520 aaPredicted RBP10.99□□□□□ -0.65
RFX3-201ENST00000302303 AGBL1Q96MI9 1066 aa10.99□□□□□ -0.65
RFX3-201ENST00000302303 ZCCHC17Q9NP64 241 aaKnown RBP10.99□□□□□ -0.65
RFX3-201ENST00000302303 ORC3Q9UBD5 711 aaPredicted RBP10.99□□□□□ -0.65
RFX3-201ENST00000302303 CPLX1O14810 134 aa10.99□□□□□ -0.65
RFX3-201ENST00000302303 GJB2P29033 226 aa10.99□□□□□ -0.65
RFX3-201ENST00000302303 SSRP1Q08945 709 aaKnown RBP10.99□□□□□ -0.65
RFX3-201ENST00000302303 WWC2Q6AWC2 1192 aa10.99□□□□□ -0.65
RFX3-201ENST00000302303 SAMD1Q6SPF0 538 aaPredicted RBP10.99□□□□□ -0.65
RFX3-201ENST00000302303 PAXIP1Q6ZW49 1069 aaPredicted RBP10.99□□□□□ -0.65
RFX3-201ENST00000302303 HOMER1Q86YM7 354 aa10.99□□□□□ -0.65
RFX3-201ENST00000302303 SPRYD3Q8NCJ5 442 aa10.99□□□□□ -0.65
RFX3-201ENST00000302303 COA7Q96BR5 231 aa10.99□□□□□ -0.65
RFX3-201ENST00000302303 RAVER2Q9HCJ3 691 aaKnown RBP10.99□□□□□ -0.65
RFX3-201ENST00000302303 COL11A1P12107 1806 aaPredicted RBP10.98□□□□□ -0.65
RFX3-201ENST00000302303 STXBP3O00186 592 aa10.98□□□□□ -0.65
RFX3-201ENST00000302303 DEXIO95424 95 aa10.98□□□□□ -0.65
RFX3-201ENST00000302303 ICAM1P05362 532 aa10.98□□□□□ -0.65
RFX3-201ENST00000302303 BCRP11274 1271 aa10.98□□□□□ -0.65
RFX3-201ENST00000302303 SCG2P13521 617 aa10.98□□□□□ -0.65
RFX3-201ENST00000302303 OSBPP22059 807 aa10.98□□□□□ -0.65
RFX3-201ENST00000302303 ANP32AP39687 249 aaKnown RBP10.98□□□□□ -0.65
RFX3-201ENST00000302303 IRX3P78415 501 aaPredicted RBP10.98□□□□□ -0.65
RFX3-201ENST00000302303 SREBF2Q12772 1141 aa10.98□□□□□ -0.65
RFX3-201ENST00000302303 IKQ13123 557 aaPredicted RBP10.98□□□□□ -0.65
RFX3-201ENST00000302303 PABPC4Q13310 644 aaKnown RBP eCLIP10.98□□□□□ -0.65
RFX3-201ENST00000302303 BECN1Q14457 450 aa10.98□□□□□ -0.65
RFX3-201ENST00000302303 C17orf99Q6UX52 265 aa10.98□□□□□ -0.65
RFX3-201ENST00000302303 CLEC4DQ8WXI8 215 aa10.98□□□□□ -0.65
RFX3-201ENST00000302303 GPKOWQ92917 476 aaPredicted RBP eCLIP10.98□□□□□ -0.65
RFX3-201ENST00000302303 RRP36Q96EU6 259 aaKnown RBP10.98□□□□□ -0.65
RFX3-201ENST00000302303 BARHL2Q9NY43 387 aa10.98□□□□□ -0.65
RFX3-201ENST00000302303 MORF4L1Q9UBU8 362 aa10.98□□□□□ -0.65
RFX3-201ENST00000302303 CDKL5O76039 1030 aa10.97□□□□□ -0.65
RFX3-201ENST00000302303 FDX1P10109 184 aa10.97□□□□□ -0.65
RFX3-201ENST00000302303 HMGN5P82970 282 aaKnown RBP10.97□□□□□ -0.65
RFX3-201ENST00000302303 CAP1Q01518 475 aa10.97□□□□□ -0.65
RFX3-201ENST00000302303 CRHR2Q13324 411 aa10.97□□□□□ -0.65
RFX3-201ENST00000302303 OTUD7BQ6GQQ9 843 aa10.97□□□□□ -0.65
RFX3-201ENST00000302303 CCDC174Q6PII3 467 aa10.97□□□□□ -0.65
RFX3-201ENST00000302303 CPLX2Q6PUV4 134 aaKnown RBP10.97□□□□□ -0.65
RFX3-201ENST00000302303 TBC1D5Q92609 795 aa10.97□□□□□ -0.65
RFX3-201ENST00000302303 IPO9Q96P70 1041 aaKnown RBP10.97□□□□□ -0.65
RFX3-201ENST00000302303 CFHR5Q9BXR6 569 aa10.97□□□□□ -0.65
RFX3-201ENST00000302303 ISY1Q9ULR0 285 aaKnown RBP10.97□□□□□ -0.65
RFX3-201ENST00000302303 RABGAP1Q9Y3P9 1069 aa10.97□□□□□ -0.65
RFX3-201ENST00000302303 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.97□□□□□ -0.65
RFX3-201ENST00000302303 M0R2N6 131 aa10.96□□□□□ -0.65
RFX3-201ENST00000302303 CA12O43570 354 aa10.96□□□□□ -0.65
RFX3-201ENST00000302303 TLR2O60603 784 aa10.96□□□□□ -0.65
RFX3-201ENST00000302303 ZBED4O75132 1171 aa10.96□□□□□ -0.65
RFX3-201ENST00000302303 OAZ1P54368 228 aa10.96□□□□□ -0.65
RFX3-201ENST00000302303 PKP1Q13835 747 aa10.96□□□□□ -0.65
RFX3-201ENST00000302303 MUM1L1Q5H9M0 696 aa10.96□□□□□ -0.65
RFX3-201ENST00000302303 FBXO11Q86XK2 927 aa10.96□□□□□ -0.65
RFX3-201ENST00000302303 REM2Q8IYK8 340 aaPredicted RBP10.96□□□□□ -0.65
RFX3-201ENST00000302303 CPXCR1Q8N123 301 aa10.96□□□□□ -0.65
RFX3-201ENST00000302303 MB21D1Q8N884 522 aa10.96□□□□□ -0.65
RFX3-201ENST00000302303 ALG1Q9BT22 464 aa10.96□□□□□ -0.65
RFX3-201ENST00000302303 AMNQ9BXJ7 453 aa10.96□□□□□ -0.65
RFX3-201ENST00000302303 MOV10L1Q9BXT6 1211 aaKnown RBP10.96□□□□□ -0.65
RFX3-201ENST00000302303 SPATC1LQ9H0A9 340 aa10.96□□□□□ -0.65
RFX3-201ENST00000302303 RNF186Q9NXI6 227 aa10.96□□□□□ -0.65
RFX3-201ENST00000302303 VPS54Q9P1Q0 977 aa10.96□□□□□ -0.65
RFX3-201ENST00000302303 PNMA3Q9UL41 463 aa10.96□□□□□ -0.65
RFX3-201ENST00000302303 SMC3Q9UQE7 1217 aa10.96□□□□□ -0.65
RFX3-201ENST00000302303 SYT1P21579 422 aa10.95□□□□□ -0.66
RFX3-201ENST00000302303 CTGFP29279 349 aa10.95□□□□□ -0.66
RFX3-201ENST00000302303 STAT3P40763 770 aa10.95□□□□□ -0.66
RFX3-201ENST00000302303 ERVK-9P63128 1117 aa10.95□□□□□ -0.66
RFX3-201ENST00000302303 ERVK-24P63145 666 aa10.95□□□□□ -0.66
RFX3-201ENST00000302303 GHRHRQ02643 423 aa10.95□□□□□ -0.66
RFX3-201ENST00000302303 TAF1CQ15572 869 aaPredicted RBP10.95□□□□□ -0.66
RFX3-201ENST00000302303 RIOX2Q8IUF8 465 aa10.95□□□□□ -0.66
RFX3-201ENST00000302303 TRIM22Q8IYM9 498 aa10.95□□□□□ -0.66
RFX3-201ENST00000302303 ANKRD13CQ8N6S4 541 aa10.95□□□□□ -0.66
RFX3-201ENST00000302303 FBXO18Q8NFZ0 1043 aa10.95□□□□□ -0.66
RFX3-201ENST00000302303 PARK7Q99497 189 aaKnown RBP10.95□□□□□ -0.66
RFX3-201ENST00000302303 PHF20Q9BVI0 1012 aa10.95□□□□□ -0.66
RFX3-201ENST00000302303 ZMYND12Q9H0C1 365 aa10.95□□□□□ -0.66
RFX3-201ENST00000302303 PORCNQ9H237 461 aa10.95□□□□□ -0.66
RFX3-201ENST00000302303 RBM27Q9P2N5 1060 aaKnown RBP10.95□□□□□ -0.66
RFX3-201ENST00000302303 CPA4Q9UI42 421 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms