RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 ZMYND12Q9H0C1 365 aa16.5■□□□□ 0.23
SMG8-201ENST00000300917 ZNF277Q9NRM2 450 aaPredicted RBP16.5■□□□□ 0.23
SMG8-201ENST00000300917 TDP2O95551 362 aa16.49■□□□□ 0.23
SMG8-201ENST00000300917 EEF2P13639 858 aaKnown RBP16.49■□□□□ 0.23
SMG8-201ENST00000300917 ADKP55263 362 aaKnown RBP16.49■□□□□ 0.23
SMG8-201ENST00000300917 E2F4Q16254 413 aa16.49■□□□□ 0.23
SMG8-201ENST00000300917 HHIPL2Q6UWX4 724 aa16.49■□□□□ 0.23
SMG8-201ENST00000300917 RGS17Q9UGC6 210 aaPredicted RBP16.49■□□□□ 0.23
SMG8-201ENST00000300917 MYH1P12882 1939 aa16.49■□□□□ 0.23
SMG8-201ENST00000300917 RIOK3O14730 519 aaKnown RBP16.49■□□□□ 0.23
SMG8-201ENST00000300917 CCT6AP40227 531 aaKnown RBP16.49■□□□□ 0.23
SMG8-201ENST00000300917 CERKLQ49MI3 558 aaPredicted RBP16.49■□□□□ 0.23
SMG8-201ENST00000300917 LZTS2Q9BRK4 669 aa16.49■□□□□ 0.23
SMG8-201ENST00000300917 JMJD4Q9H9V9 463 aa16.49■□□□□ 0.23
SMG8-201ENST00000300917 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.49■□□□□ 0.23
SMG8-201ENST00000300917 YDJCA8MPS7 323 aa16.48■□□□□ 0.23
SMG8-201ENST00000300917 TPM2P07951 284 aa16.48■□□□□ 0.23
SMG8-201ENST00000300917 GNA11P29992 359 aa16.48■□□□□ 0.23
SMG8-201ENST00000300917 PDXDC2PQ6P474 469 aa16.48■□□□□ 0.23
SMG8-201ENST00000300917 LRRC15Q8TF66 581 aa16.48■□□□□ 0.23
SMG8-201ENST00000300917 TMX1Q9H3N1 280 aa16.48■□□□□ 0.23
SMG8-201ENST00000300917 TEX33O43247 280 aa16.48■□□□□ 0.23
SMG8-201ENST00000300917 NEMFO60524 1076 aa16.48■□□□□ 0.23
SMG8-201ENST00000300917 PPP1R11O60927 126 aaPredicted RBP16.48■□□□□ 0.23
SMG8-201ENST00000300917 STRIP1Q5VSL9 837 aa16.48■□□□□ 0.23
SMG8-201ENST00000300917 FAM177A1Q8N128 213 aaPredicted RBP16.48■□□□□ 0.23
SMG8-201ENST00000300917 DACH1Q9UI36 760 aa16.48■□□□□ 0.23
SMG8-201ENST00000300917 SYNRGQ9UMZ2 1314 aa16.48■□□□□ 0.23
SMG8-201ENST00000300917 PES1O00541 588 aaKnown RBP16.48■□□□□ 0.23
SMG8-201ENST00000300917 NT5DC1Q5TFE4 455 aa16.48■□□□□ 0.23
SMG8-201ENST00000300917 SH3RF1Q7Z6J0 888 aa16.48■□□□□ 0.23
SMG8-201ENST00000300917 NEK8Q86SG6 692 aa16.48■□□□□ 0.23
SMG8-201ENST00000300917 CCDC12Q8WUD4 166 aaPredicted RBP16.48■□□□□ 0.23
SMG8-201ENST00000300917 CNKSR1Q969H4 720 aa16.48■□□□□ 0.23
SMG8-201ENST00000300917 SUGT1Q9Y2Z0 365 aa16.48■□□□□ 0.23
SMG8-201ENST00000300917 USP17L15C9J2P7 530 aa16.47■□□□□ 0.23
SMG8-201ENST00000300917 USP17L13C9JLJ4 530 aa16.47■□□□□ 0.23
SMG8-201ENST00000300917 USP17L11C9JVI0 530 aa16.47■□□□□ 0.23
SMG8-201ENST00000300917 USP17L18D6R9N7 530 aa16.47■□□□□ 0.23
SMG8-201ENST00000300917 USP17L22D6RA61 530 aa16.47■□□□□ 0.23
SMG8-201ENST00000300917 USP17L17D6RBQ6 530 aa16.47■□□□□ 0.23
SMG8-201ENST00000300917 USP17L19D6RCP7 530 aa16.47■□□□□ 0.23
SMG8-201ENST00000300917 USP17L20D6RJB6 530 aa16.47■□□□□ 0.23
SMG8-201ENST00000300917 ZNF543Q08ER8 600 aa16.47■□□□□ 0.23
SMG8-201ENST00000300917 USP17L24Q0WX57 530 aa16.47■□□□□ 0.23
SMG8-201ENST00000300917 USP17L6PQ6QN14 398 aa16.47■□□□□ 0.23
SMG8-201ENST00000300917 ZDHHC15Q96MV8 337 aa16.47■□□□□ 0.23
SMG8-201ENST00000300917 DISC1Q9NRI5 854 aa16.47■□□□□ 0.23
SMG8-201ENST00000300917 TRIM49BA6NDI0 452 aa16.47■□□□□ 0.23
SMG8-201ENST00000300917 SLC1A4P43007 532 aa16.47■□□□□ 0.23
SMG8-201ENST00000300917 ADCY7P51828 1080 aa16.47■□□□□ 0.23
SMG8-201ENST00000300917 GSDMDP57764 484 aa16.47■□□□□ 0.23
SMG8-201ENST00000300917 JAG1P78504 1218 aa16.47■□□□□ 0.23
SMG8-201ENST00000300917 HPS3Q969F9 1004 aa16.47■□□□□ 0.23
SMG8-201ENST00000300917 OR52Z1P0C646 297 aa16.46■□□□□ 0.23
SMG8-201ENST00000300917 LONP1P36776 959 aaKnown RBP16.46■□□□□ 0.23
SMG8-201ENST00000300917 ZYXQ15942 572 aaKnown RBP16.46■□□□□ 0.23
SMG8-201ENST00000300917 USH1GQ495M9 461 aa16.46■□□□□ 0.23
SMG8-201ENST00000300917 NAALADL2Q58DX5 795 aa16.46■□□□□ 0.23
SMG8-201ENST00000300917 KRT25Q7Z3Z0 450 aa16.46■□□□□ 0.23
SMG8-201ENST00000300917 ENOX1Q8TC92 643 aaKnown RBP16.46■□□□□ 0.23
SMG8-201ENST00000300917 RIOX1Q9H6W3 641 aa16.46■□□□□ 0.23
SMG8-201ENST00000300917 VEZTQ9HBM0 779 aa16.46■□□□□ 0.23
SMG8-201ENST00000300917 DLEC1Q9Y238 1755 aa16.46■□□□□ 0.23
SMG8-201ENST00000300917 SLX4Q8IY92 1834 aa16.46■□□□□ 0.23
SMG8-201ENST00000300917 CBFA2T2O43439 604 aa16.46■□□□□ 0.23
SMG8-201ENST00000300917 SLC37A4O43826 429 aa16.46■□□□□ 0.23
SMG8-201ENST00000300917 MARCH6O60337 910 aa16.46■□□□□ 0.23
SMG8-201ENST00000300917 PLCG1P19174 1290 aa16.46■□□□□ 0.23
SMG8-201ENST00000300917 SPATA20Q8TB22 786 aa16.46■□□□□ 0.23
SMG8-201ENST00000300917 COL11A2P13942 1736 aaPredicted RBP16.46■□□□□ 0.22
SMG8-201ENST00000300917 POTEMA6NI47 508 aa16.46■□□□□ 0.22
SMG8-201ENST00000300917 PPP1R3GB7ZBB8 358 aa16.46■□□□□ 0.22
SMG8-201ENST00000300917 RPN1P04843 607 aaKnown RBP16.46■□□□□ 0.22
SMG8-201ENST00000300917 ASPRV1Q53RT3 343 aa16.46■□□□□ 0.22
SMG8-201ENST00000300917 CABP7Q86V35 215 aa16.46■□□□□ 0.22
SMG8-201ENST00000300917 CDAN1Q8IWY9 1227 aa16.46■□□□□ 0.22
SMG8-201ENST00000300917 CDK5RAP2Q96SN8 1893 aa16.45■□□□□ 0.22
SMG8-201ENST00000300917 ZBTB22O15209 634 aa16.45■□□□□ 0.22
SMG8-201ENST00000300917 GH2P01242 217 aa16.45■□□□□ 0.22
SMG8-201ENST00000300917 ARL6IP4Q66PJ3 421 aaKnown RBP16.45■□□□□ 0.22
SMG8-201ENST00000300917 STYK1Q6J9G0 422 aa16.45■□□□□ 0.22
SMG8-201ENST00000300917 VSTM4Q8IW00 320 aa16.45■□□□□ 0.22
SMG8-201ENST00000300917 LARGE2Q8N3Y3 721 aa16.45■□□□□ 0.22
SMG8-201ENST00000300917 CSRNP1Q96S65 589 aa16.45■□□□□ 0.22
SMG8-201ENST00000300917 VPS16Q9H269 839 aa16.45■□□□□ 0.22
SMG8-201ENST00000300917 SWAP70Q9UH65 585 aa16.45■□□□□ 0.22
SMG8-201ENST00000300917 ICA1Q05084 483 aa16.45■□□□□ 0.22
SMG8-201ENST00000300917 PTPN14Q15678 1187 aa16.45■□□□□ 0.22
SMG8-201ENST00000300917 SLFN13Q68D06 897 aa16.45■□□□□ 0.22
SMG8-201ENST00000300917 GSDMAQ96QA5 445 aa16.45■□□□□ 0.22
SMG8-201ENST00000300917 CAMKK2Q96RR4 588 aa16.45■□□□□ 0.22
SMG8-201ENST00000300917 PI4KBQ9UBF8 816 aa16.45■□□□□ 0.22
SMG8-201ENST00000300917 IGKV6D-41A0A0C4DH26 115 aa16.44■□□□□ 0.22
SMG8-201ENST00000300917 ERCC3P19447 782 aa16.44■□□□□ 0.22
SMG8-201ENST00000300917 NAA30Q147X3 362 aaPredicted RBP16.44■□□□□ 0.22
SMG8-201ENST00000300917 E4F1Q66K89 784 aaPredicted RBP16.44■□□□□ 0.22
SMG8-201ENST00000300917 CCDC84Q86UT8 332 aaPredicted RBP16.44■□□□□ 0.22
SMG8-201ENST00000300917 TRIML1Q8N9V2 468 aa16.44■□□□□ 0.22
SMG8-201ENST00000300917 GTPBP6O43824 516 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms