RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 MBD4O95243 580 aa12.23□□□□□ -0.45
SNX20-201ENST00000300590 RPN1P04843 607 aaKnown RBP12.23□□□□□ -0.45
SNX20-201ENST00000300590 CALRP27797 417 aaKnown RBP12.23□□□□□ -0.45
SNX20-201ENST00000300590 SGMS1Q86VZ5 419 aa12.23□□□□□ -0.45
SNX20-201ENST00000300590 FANCBQ8NB91 859 aa12.23□□□□□ -0.45
SNX20-201ENST00000300590 MYCBPAPQ8TBZ2 947 aa12.23□□□□□ -0.45
SNX20-201ENST00000300590 OSBPL9Q96SU4 736 aa12.23□□□□□ -0.45
SNX20-201ENST00000300590 IFIH1Q9BYX4 1025 aaKnown RBP12.23□□□□□ -0.45
SNX20-201ENST00000300590 ZNF233A6NK53 670 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 AKR1B10O60218 316 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 GLI1P08151 1106 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 MTIF2P46199 727 aaKnown RBP12.22□□□□□ -0.45
SNX20-201ENST00000300590 ENOX2Q16206 610 aaKnown RBP12.22□□□□□ -0.45
SNX20-201ENST00000300590 PTPROQ16827 1216 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 TMED8Q6PL24 325 aaPredicted RBP12.22□□□□□ -0.45
SNX20-201ENST00000300590 LDHAL6AQ6ZMR3 332 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 C2CD5Q86YS7 1000 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 KCNH5Q8NCM2 988 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 OR2W6PQ8NHA6 318 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 CAPN11Q9UMQ6 739 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 NBPF26B4DH59 902 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 SMIM22K7EJ46 135 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 USO1O60763 962 aaKnown RBP12.22□□□□□ -0.45
SNX20-201ENST00000300590 PDE6AP16499 860 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 HLTFQ14527 1009 aaKnown RBP eCLIP12.22□□□□□ -0.45
SNX20-201ENST00000300590 PTGISQ16647 500 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 SPRED3Q2MJR0 410 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 HAUS3Q68CZ6 603 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 NBPF10Q6P3W6 841 aaKnown RBP12.22□□□□□ -0.45
SNX20-201ENST00000300590 IFNL3Q8IZI9 196 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 NBPF15Q8N660 670 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 FAM207AQ9NSI2 230 aaPredicted RBP12.22□□□□□ -0.45
SNX20-201ENST00000300590 TBC1D2BQ9UPU7 963 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 MYH10P35580 1976 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 NUTM2BA6NNL0 878 aaPredicted RBP12.22□□□□□ -0.45
SNX20-201ENST00000300590 LGALS16A8MUM7 142 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 NUTM2EB1AL46 878 aaPredicted RBP12.22□□□□□ -0.45
SNX20-201ENST00000300590 OPLAHO14841 1288 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 ZNF263O14978 683 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 HEXIM1O94992 359 aaKnown RBP12.22□□□□□ -0.45
SNX20-201ENST00000300590 TATP17735 454 aaPredicted RBP12.22□□□□□ -0.45
SNX20-201ENST00000300590 TMOD1P28289 359 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 GBP2P32456 591 aaPredicted RBP12.22□□□□□ -0.45
SNX20-201ENST00000300590 KRT2P35908 639 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 SKOR1P84550 965 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 TTC38Q5R3I4 469 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 ALS2CLQ60I27 953 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 PIK3AP1Q6ZUJ8 805 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 TICAM2Q86XR7 235 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 ZNF654Q8IZM8 581 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 MIGA1Q8NAN2 632 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 SHISA4Q96DD7 197 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 DNAJC7Q99615 494 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 TUBGCP2Q9BSJ2 902 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 CNNM1Q9NRU3 951 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 DDX20Q9UHI6 824 aaKnown RBP12.22□□□□□ -0.45
SNX20-201ENST00000300590 MCM8Q9UJA3 840 aa12.22□□□□□ -0.45
SNX20-201ENST00000300590 NKRFO15226 690 aaKnown RBP eCLIP12.21□□□□□ -0.45
SNX20-201ENST00000300590 XBP1P17861 261 aa12.21□□□□□ -0.45
SNX20-201ENST00000300590 LIFRP42702 1097 aa12.21□□□□□ -0.45
SNX20-201ENST00000300590 CABP4P57796 275 aa12.21□□□□□ -0.45
SNX20-201ENST00000300590 NAIF1Q69YI7 327 aaPredicted RBP12.21□□□□□ -0.45
SNX20-201ENST00000300590 TMC4Q7Z404 712 aa12.21□□□□□ -0.45
SNX20-201ENST00000300590 EGFL6Q8IUX8 553 aa12.21□□□□□ -0.45
SNX20-201ENST00000300590 MMGT1Q8N4V1 131 aa12.21□□□□□ -0.45
SNX20-201ENST00000300590 MAGEB6Q8N7X4 407 aa12.21□□□□□ -0.45
SNX20-201ENST00000300590 VCPKMTQ9H867 229 aa12.21□□□□□ -0.45
SNX20-201ENST00000300590 KDM3BQ7LBC6 1761 aa12.21□□□□□ -0.45
SNX20-201ENST00000300590 WDR19Q8NEZ3 1342 aa12.21□□□□□ -0.45
SNX20-201ENST00000300590 IFIT5Q13325 482 aaKnown RBP12.21□□□□□ -0.45
SNX20-201ENST00000300590 SNCBQ16143 134 aa12.21□□□□□ -0.45
SNX20-201ENST00000300590 AKNAD1Q5T1N1 836 aa12.21□□□□□ -0.45
SNX20-201ENST00000300590 ZNF658Q5TYW1 1059 aaPredicted RBP12.21□□□□□ -0.45
SNX20-201ENST00000300590 EMBQ6PCB8 327 aa12.21□□□□□ -0.45
SNX20-201ENST00000300590 CSGALNACT2Q8N6G5 542 aa12.21□□□□□ -0.45
SNX20-201ENST00000300590 EPB41L4AQ9HCS5 686 aaPredicted RBP12.21□□□□□ -0.45
SNX20-201ENST00000300590 DIP2BQ9P265 1576 aa12.21□□□□□ -0.46
SNX20-201ENST00000300590 PP2D1A8MPX8 630 aa12.21□□□□□ -0.46
SNX20-201ENST00000300590 H7C1D1 291 aa12.21□□□□□ -0.46
SNX20-201ENST00000300590 STAT6P42226 847 aa12.21□□□□□ -0.46
SNX20-201ENST00000300590 PHKA1P46020 1223 aa12.21□□□□□ -0.46
SNX20-201ENST00000300590 SARNPP82979 210 aaKnown RBP12.21□□□□□ -0.46
SNX20-201ENST00000300590 DDR1Q08345 913 aa12.21□□□□□ -0.46
SNX20-201ENST00000300590 KLHL7Q8IXQ5 586 aa12.21□□□□□ -0.46
SNX20-201ENST00000300590 TRIM58Q8NG06 486 aa12.21□□□□□ -0.46
SNX20-201ENST00000300590 RNF217Q8TC41 542 aa12.21□□□□□ -0.46
SNX20-201ENST00000300590 STRBPQ96SI9 672 aaKnown RBP12.21□□□□□ -0.46
SNX20-201ENST00000300590 BAIAP2L1Q9UHR4 511 aa12.21□□□□□ -0.46
SNX20-201ENST00000300590 PACSIN2Q9UNF0 486 aaPredicted RBP12.21□□□□□ -0.46
SNX20-201ENST00000300590 EZRP15311 586 aaKnown RBP12.2□□□□□ -0.46
SNX20-201ENST00000300590 MDH1P40925 334 aaKnown RBP12.2□□□□□ -0.46
SNX20-201ENST00000300590 SMTNP53814 917 aa12.2□□□□□ -0.46
SNX20-201ENST00000300590 PREPLQ4J6C6 727 aaPredicted RBP12.2□□□□□ -0.46
SNX20-201ENST00000300590 KRT12Q99456 494 aa12.2□□□□□ -0.46
SNX20-201ENST00000300590 MMRN2Q9H8L6 949 aa12.2□□□□□ -0.46
SNX20-201ENST00000300590 RICTORQ6R327 1708 aa12.2□□□□□ -0.46
SNX20-201ENST00000300590 MST1RQ04912 1400 aa12.2□□□□□ -0.46
SNX20-201ENST00000300590 ANO9A1A5B4 782 aa12.2□□□□□ -0.46
SNX20-201ENST00000300590 GTPBP6O43824 516 aaPredicted RBP12.2□□□□□ -0.46
SNX20-201ENST00000300590 PLEKHA8P1O95397 391 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms