RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 CASP2P42575 452 aa14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 SNX1Q13596 522 aa14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 CERKLQ49MI3 558 aaPredicted RBP14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 KCTD1Q719H9 257 aa14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 SRGAP1Q7Z6B7 1085 aa14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 POTEDQ86YR6 584 aa14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 GRAMD1CQ8IYS0 662 aa14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 RAB17Q9H0T7 212 aa14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 CAPN7Q9Y6W3 813 aa14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 COL17A1Q9UMD9 1497 aaPredicted RBP14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 KDM3AQ9Y4C1 1321 aa14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 SCRN1Q12765 414 aa14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 KCTD16Q68DU8 428 aa14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 ADALQ6DHV7 355 aa14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 RNF10Q8N5U6 811 aaKnown RBP14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 IL1RL1Q01638 556 aa14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 TSNAXIP1Q2TAA8 658 aa14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 SMAP1Q8IYB5 467 aaPredicted RBP14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 EAF2Q96CJ1 260 aaPredicted RBP14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 PPME1Q9Y570 386 aa14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 EDC4Q6P2E9 1401 aaKnown RBP14.9□□□□□ -0.02
CHRFAM7A-201ENST00000299847 SEC31AO94979 1220 aaKnown RBP14.89□□□□□ -0.03
CHRFAM7A-201ENST00000299847 P4HA1P13674 534 aa14.89□□□□□ -0.03
CHRFAM7A-201ENST00000299847 CHRNDQ07001 517 aa14.89□□□□□ -0.03
CHRFAM7A-201ENST00000299847 LRRC41Q15345 812 aa14.89□□□□□ -0.03
CHRFAM7A-201ENST00000299847 NT5C3AQ9H0P0 336 aa14.89□□□□□ -0.03
CHRFAM7A-201ENST00000299847 NRBP1Q9UHY1 535 aa14.89□□□□□ -0.03
CHRFAM7A-201ENST00000299847 MAD1L1Q9Y6D9 718 aa14.89□□□□□ -0.03
CHRFAM7A-201ENST00000299847 THAP12O43422 761 aa14.89□□□□□ -0.03
CHRFAM7A-201ENST00000299847 RPS8P62241 208 aaKnown RBP14.89□□□□□ -0.03
CHRFAM7A-201ENST00000299847 PCDHA7Q9UN72 937 aa14.89□□□□□ -0.03
CHRFAM7A-201ENST00000299847 TMEM232C9JQI7 657 aa14.89□□□□□ -0.03
CHRFAM7A-201ENST00000299847 TCIRG1Q13488 830 aa14.89□□□□□ -0.03
CHRFAM7A-201ENST00000299847 ARMCX5Q6P1M9 558 aa14.89□□□□□ -0.03
CHRFAM7A-201ENST00000299847 FANCBQ8NB91 859 aa14.89□□□□□ -0.03
CHRFAM7A-201ENST00000299847 POMGNT1Q8WZA1 660 aa14.89□□□□□ -0.03
CHRFAM7A-201ENST00000299847 NUP153P49790 1475 aaKnown RBP14.89□□□□□ -0.03
CHRFAM7A-201ENST00000299847 KIF3CO14782 793 aa14.89□□□□□ -0.03
CHRFAM7A-201ENST00000299847 TNNC2P02585 160 aa14.89□□□□□ -0.03
CHRFAM7A-201ENST00000299847 KIF22Q14807 665 aa14.89□□□□□ -0.03
CHRFAM7A-201ENST00000299847 GREM2Q9H772 168 aa14.89□□□□□ -0.03
CHRFAM7A-201ENST00000299847 TSKSQ9UJT2 592 aa14.89□□□□□ -0.03
CHRFAM7A-201ENST00000299847 UBN2Q6ZU65 1347 aa14.89□□□□□ -0.03
CHRFAM7A-201ENST00000299847 ADCY9O60503 1353 aa14.89□□□□□ -0.03
CHRFAM7A-201ENST00000299847 OR52Z1P0C646 297 aa14.89□□□□□ -0.03
CHRFAM7A-201ENST00000299847 PDE6AP16499 860 aa14.89□□□□□ -0.03
CHRFAM7A-201ENST00000299847 PLA2G4DQ86XP0 818 aa14.89□□□□□ -0.03
CHRFAM7A-201ENST00000299847 DISC1Q9NRI5 854 aa14.89□□□□□ -0.03
CHRFAM7A-201ENST00000299847 FGAP02671 866 aa14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 ADAM9Q13443 819 aa14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 MUM1Q2TAK8 710 aa14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 TMOD1P28289 359 aa14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 SLC16A2P36021 539 aa14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 POLGP54098 1239 aaPredicted RBP14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 FOXD4Q12950 439 aaPredicted RBP14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 C1orf112Q9NSG2 853 aa14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 CSADQ9Y600 493 aa14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 CFAP65Q6ZU64 1925 aaKnown RBP14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 POC1B-GALNT4F8VUJ3 575 aa14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 PER1O15534 1290 aaPredicted RBP14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 GSTA1P08263 222 aa14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 GSTA2P09210 222 aa14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 SNAP25P60880 206 aa14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 PTGDRQ13258 359 aa14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 FBXO11Q86XK2 927 aa14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 FAM178BQ8IXR5 827 aa14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 PPP4R1Q8TF05 950 aa14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 ATP8A2Q9NTI2 1148 aa14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 SEPT9Q9UHD8 586 aaPredicted RBP14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 BRD1O95696 1058 aa14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 GNA14O95837 355 aa14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 DYNLL1P63167 89 aaKnown RBP14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 ANKRD35Q8N283 1001 aa14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 PCIF1Q9H4Z3 704 aa14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 MEIS1O00470 390 aa14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 MYCP01106 439 aaPredicted RBP14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 PPFIA1Q13136 1202 aa14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 FAM182BQ5T319 152 aa14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 NEK8Q86SG6 692 aa14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 OR8K1Q8NGG5 319 aa14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 GABPB2Q8TAK5 448 aaPredicted RBP14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 TEX14Q8IWB6 1497 aa14.88□□□□□ -0.03
CHRFAM7A-201ENST00000299847 LPXNO60711 386 aa14.87□□□□□ -0.03
CHRFAM7A-201ENST00000299847 PHKA1P46020 1223 aa14.87□□□□□ -0.03
CHRFAM7A-201ENST00000299847 CCDC84Q86UT8 332 aaPredicted RBP14.87□□□□□ -0.03
CHRFAM7A-201ENST00000299847 HYOU1Q9Y4L1 999 aa14.87□□□□□ -0.03
CHRFAM7A-201ENST00000299847 A0A1B0GUA9 196 aa14.87□□□□□ -0.03
CHRFAM7A-201ENST00000299847 SCG2P13521 617 aa14.87□□□□□ -0.03
CHRFAM7A-201ENST00000299847 MESDQ14696 234 aa14.87□□□□□ -0.03
CHRFAM7A-201ENST00000299847 SUPT20HQ8NEM7 779 aa14.87□□□□□ -0.03
CHRFAM7A-201ENST00000299847 ATP2A3Q93084 1043 aa14.87□□□□□ -0.03
CHRFAM7A-201ENST00000299847 KIAA1024Q9UPX6 916 aa14.87□□□□□ -0.03
CHRFAM7A-201ENST00000299847 RIPOR2Q9Y4F9 1068 aa14.87□□□□□ -0.03
CHRFAM7A-201ENST00000299847 H7C1D1 291 aa14.87□□□□□ -0.03
CHRFAM7A-201ENST00000299847 ALDH1B1P30837 517 aa14.87□□□□□ -0.03
CHRFAM7A-201ENST00000299847 EHHADHQ08426 723 aa14.87□□□□□ -0.03
CHRFAM7A-201ENST00000299847 ADCK5Q3MIX3 580 aa14.87□□□□□ -0.03
CHRFAM7A-201ENST00000299847 ARHGAP27Q6ZUM4 889 aa14.87□□□□□ -0.03
CHRFAM7A-201ENST00000299847 LRRC8AQ8IWT6 810 aa14.87□□□□□ -0.03
CHRFAM7A-201ENST00000299847 TEKT3Q9BXF9 490 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms