RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 TBC1D8BQ0IIM8 1120 aa16.58■□□□□ 0.24
SPIDR-201ENST00000297423 CCDC178Q5BJE1 867 aa16.58■□□□□ 0.24
SPIDR-201ENST00000297423 LRCH2Q5VUJ6 765 aa16.58■□□□□ 0.24
SPIDR-201ENST00000297423 AFDNP55196 1824 aaKnown RBP16.57■□□□□ 0.24
SPIDR-201ENST00000297423 A0A1B0GTH6 734 aa16.57■□□□□ 0.24
SPIDR-201ENST00000297423 KRT83P78385 493 aa16.57■□□□□ 0.24
SPIDR-201ENST00000297423 PAK1Q13153 545 aa16.57■□□□□ 0.24
SPIDR-201ENST00000297423 WTAPQ15007 396 aa16.57■□□□□ 0.24
SPIDR-201ENST00000297423 KLHL7Q8IXQ5 586 aa16.57■□□□□ 0.24
SPIDR-201ENST00000297423 PROCA1Q8NCQ7 364 aaPredicted RBP16.57■□□□□ 0.24
SPIDR-201ENST00000297423 GDAQ9Y2T3 454 aa16.57■□□□□ 0.24
SPIDR-201ENST00000297423 SLC4A4Q9Y6R1 1079 aa16.57■□□□□ 0.24
SPIDR-201ENST00000297423 SHANK3Q9BYB0 1731 aa16.57■□□□□ 0.24
SPIDR-201ENST00000297423 RNF225M0QZC1 329 aaPredicted RBP16.57■□□□□ 0.24
SPIDR-201ENST00000297423 TACC1O75410 805 aa16.57■□□□□ 0.24
SPIDR-201ENST00000297423 RFC4P35249 363 aa16.57■□□□□ 0.24
SPIDR-201ENST00000297423 LINC00116Q8NCU8 138 aa16.57■□□□□ 0.24
SPIDR-201ENST00000297423 SETDB2Q96T68 719 aa16.57■□□□□ 0.24
SPIDR-201ENST00000297423 TTC26A0AVF1 554 aa16.57■□□□□ 0.24
SPIDR-201ENST00000297423 CAMTA2O94983 1202 aa16.57■□□□□ 0.24
SPIDR-201ENST00000297423 RILPL1Q5EBL4 403 aa16.57■□□□□ 0.24
SPIDR-201ENST00000297423 MIGA1Q8NAN2 632 aa16.57■□□□□ 0.24
SPIDR-201ENST00000297423 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.57■□□□□ 0.247e-6■■■■■ 27.7
SPIDR-201ENST00000297423 RANBP6O60518 1105 aaKnown RBP16.56■□□□□ 0.24
SPIDR-201ENST00000297423 SCARF1Q14162 830 aa16.56■□□□□ 0.24
SPIDR-201ENST00000297423 PTPAQ15257 358 aa16.56■□□□□ 0.24
SPIDR-201ENST00000297423 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.56■□□□□ 0.24
SPIDR-201ENST00000297423 DMGDHQ9UI17 866 aaKnown RBP16.56■□□□□ 0.24
SPIDR-201ENST00000297423 ARFGEF2Q9Y6D5 1785 aa16.56■□□□□ 0.24
SPIDR-201ENST00000297423 LRP6O75581 1613 aa16.56■□□□□ 0.24
SPIDR-201ENST00000297423 ZMYM6O95789 1325 aa16.56■□□□□ 0.24
SPIDR-201ENST00000297423 NCK2O43639 380 aa16.56■□□□□ 0.24
SPIDR-201ENST00000297423 USP5P45974 858 aa16.56■□□□□ 0.24
SPIDR-201ENST00000297423 CEP89Q96ST8 783 aa16.56■□□□□ 0.24
SPIDR-201ENST00000297423 TACO1Q9BSH4 297 aaKnown RBP16.56■□□□□ 0.24
SPIDR-201ENST00000297423 HAUS4Q9H6D7 363 aa16.56■□□□□ 0.24
SPIDR-201ENST00000297423 ADD3Q9UEY8 706 aaKnown RBP16.56■□□□□ 0.24
SPIDR-201ENST00000297423 CSF1RP07333 972 aa16.56■□□□□ 0.24
SPIDR-201ENST00000297423 GUCY2DQ02846 1103 aa16.56■□□□□ 0.24
SPIDR-201ENST00000297423 MFSD6Q6ZSS7 791 aa16.56■□□□□ 0.24
SPIDR-201ENST00000297423 NBPF3Q9H094 633 aa16.56■□□□□ 0.24
SPIDR-201ENST00000297423 FAM207AQ9NSI2 230 aaPredicted RBP16.56■□□□□ 0.24
SPIDR-201ENST00000297423 CPLX4Q7Z7G2 160 aa16.55■□□□□ 0.24
SPIDR-201ENST00000297423 NBPF5PQ86XG9 351 aaPredicted RBP16.55■□□□□ 0.24
SPIDR-201ENST00000297423 TBC1D10CQ8IV04 446 aa16.55■□□□□ 0.24
SPIDR-201ENST00000297423 APPBP2Q92624 585 aa16.55■□□□□ 0.24
SPIDR-201ENST00000297423 LRWD1Q9UFC0 647 aa16.55■□□□□ 0.24
SPIDR-201ENST00000297423 NFU1Q9UMS0 254 aa16.55■□□□□ 0.24
SPIDR-201ENST00000297423 HPSEQ9Y251 543 aa16.55■□□□□ 0.24
SPIDR-201ENST00000297423 ITGB4P16144 1822 aa16.55■□□□□ 0.24
SPIDR-201ENST00000297423 B4DLN1 442 aa16.55■□□□□ 0.24
SPIDR-201ENST00000297423 EIF3HO15372 352 aaKnown RBP eCLIP16.55■□□□□ 0.243e-7■□□□□ 10.4
SPIDR-201ENST00000297423 MOCS3O95396 460 aa16.55■□□□□ 0.24
SPIDR-201ENST00000297423 NEDD9Q14511 834 aa16.55■□□□□ 0.24
SPIDR-201ENST00000297423 UBN2Q6ZU65 1347 aa16.55■□□□□ 0.24
SPIDR-201ENST00000297423 UBR2Q8IWV8 1755 aa16.55■□□□□ 0.24
SPIDR-201ENST00000297423 CCDC196A0A1B0GTZ2 297 aa16.55■□□□□ 0.24
SPIDR-201ENST00000297423 PTF1AQ7RTS3 328 aa16.55■□□□□ 0.24
SPIDR-201ENST00000297423 MLXIPQ9HAP2 919 aa16.55■□□□□ 0.24
SPIDR-201ENST00000297423 ABCF2Q9UG63 623 aa16.55■□□□□ 0.24
SPIDR-201ENST00000297423 V9GY48 417 aaPredicted RBP16.55■□□□□ 0.24
SPIDR-201ENST00000297423 CCNI2Q6ZMN8 369 aaPredicted RBP16.54■□□□□ 0.24
SPIDR-201ENST00000297423 MB21D2Q8IYB1 491 aaPredicted RBP16.54■□□□□ 0.24
SPIDR-201ENST00000297423 PAGE5Q96GU1 130 aa16.54■□□□□ 0.24
SPIDR-201ENST00000297423 DOT1LQ8TEK3 1739 aa16.54■□□□□ 0.24
SPIDR-201ENST00000297423 TLDC2A0PJX2 215 aa16.54■□□□□ 0.24
SPIDR-201ENST00000297423 ERCC5P28715 1186 aaPredicted RBP16.54■□□□□ 0.24
SPIDR-201ENST00000297423 NFRKBQ6P4R8 1299 aa16.54■□□□□ 0.24
SPIDR-201ENST00000297423 CLEC4GQ6UXB4 293 aa16.54■□□□□ 0.24
SPIDR-201ENST00000297423 CACNA2D4Q7Z3S7 1137 aa16.54■□□□□ 0.24
SPIDR-201ENST00000297423 FAM184BQ9ULE4 1060 aa16.54■□□□□ 0.24
SPIDR-201ENST00000297423 NWD2Q9ULI1 1742 aa16.54■□□□□ 0.24
SPIDR-201ENST00000297423 SALL1Q9NSC2 1324 aa16.54■□□□□ 0.24
SPIDR-201ENST00000297423 STAT6P42226 847 aa16.54■□□□□ 0.24
SPIDR-201ENST00000297423 ARHGAP25P42331 645 aa16.54■□□□□ 0.24
SPIDR-201ENST00000297423 CCDC40Q4G0X9 1142 aa16.54■□□□□ 0.24
SPIDR-201ENST00000297423 C2CD5Q86YS7 1000 aa16.54■□□□□ 0.24
SPIDR-201ENST00000297423 EHBP1Q8NDI1 1231 aa16.54■□□□□ 0.24
SPIDR-201ENST00000297423 EPB41L5Q9HCM4 733 aa16.54■□□□□ 0.24
SPIDR-201ENST00000297423 GOPCQ9HD26 462 aa16.54■□□□□ 0.24
SPIDR-201ENST00000297423 RIPOR2Q9Y4F9 1068 aa16.54■□□□□ 0.24
SPIDR-201ENST00000297423 BAZ2BQ9UIF8 2168 aaKnown RBP16.54■□□□□ 0.24
SPIDR-201ENST00000297423 RPS6KA4O75676 772 aa16.53■□□□□ 0.24
SPIDR-201ENST00000297423 ZNF18P17022 549 aa16.53■□□□□ 0.24
SPIDR-201ENST00000297423 NLRP5P59047 1200 aa16.53■□□□□ 0.24
SPIDR-201ENST00000297423 SPAG1Q07617 926 aa16.53■□□□□ 0.24
SPIDR-201ENST00000297423 TRAPPC3LQ5T215 181 aa16.53■□□□□ 0.24
SPIDR-201ENST00000297423 MSL1Q68DK7 614 aa16.53■□□□□ 0.24
SPIDR-201ENST00000297423 SLC5A1P13866 664 aa16.53■□□□□ 0.24
SPIDR-201ENST00000297423 TRIM31Q9BZY9 425 aa16.53■□□□□ 0.24
SPIDR-201ENST00000297423 LACRTQ9GZZ8 138 aa16.53■□□□□ 0.24
SPIDR-201ENST00000297423 ARMT1Q9H993 441 aa16.53■□□□□ 0.24
SPIDR-201ENST00000297423 PTPREP23469 700 aa16.53■□□□□ 0.24
SPIDR-201ENST00000297423 GCKP35557 465 aa16.53■□□□□ 0.24
SPIDR-201ENST00000297423 SMIM5Q71RC9 77 aa16.53■□□□□ 0.24
SPIDR-201ENST00000297423 IQCA1Q86XH1 822 aa16.53■□□□□ 0.24
SPIDR-201ENST00000297423 ALS2CR12Q96Q35 445 aa16.53■□□□□ 0.24
SPIDR-201ENST00000297423 NEDD4P46934 1319 aa16.53■□□□□ 0.24
SPIDR-201ENST00000297423 GOLGA8KD6RF30 607 aa16.53■□□□□ 0.24
SPIDR-201ENST00000297423 IFFO1Q0D2I5 559 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms