RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 NOP2P46087 812 aaKnown RBP14.87□□□□□ -0.03
TNFRSF21-201ENST00000296861 CCDC40Q4G0X9 1142 aa14.87□□□□□ -0.03
TNFRSF21-201ENST00000296861 PNMA1Q8ND90 353 aa14.87□□□□□ -0.03
TNFRSF21-201ENST00000296861 GJA10Q969M2 543 aa14.87□□□□□ -0.03
TNFRSF21-201ENST00000296861 TMEM60Q9H2L4 133 aa14.87□□□□□ -0.03
TNFRSF21-201ENST00000296861 MARF1Q9Y4F3 1742 aaKnown RBP14.87□□□□□ -0.03
TNFRSF21-201ENST00000296861 KRT83P78385 493 aa14.86□□□□□ -0.03
TNFRSF21-201ENST00000296861 WHAMMP3Q1A5X7 153 aa14.86□□□□□ -0.03
TNFRSF21-201ENST00000296861 ODF2Q5BJF6 829 aa14.86□□□□□ -0.03
TNFRSF21-201ENST00000296861 FAM182BQ5T319 152 aa14.86□□□□□ -0.03
TNFRSF21-201ENST00000296861 FAM76AQ8TAV0 307 aa14.86□□□□□ -0.03
TNFRSF21-201ENST00000296861 TGFBRAP1Q8WUH2 860 aa14.86□□□□□ -0.03
TNFRSF21-201ENST00000296861 IFIH1Q9BYX4 1025 aaKnown RBP14.86□□□□□ -0.03
TNFRSF21-201ENST00000296861 SLIT3O75094 1523 aa14.86□□□□□ -0.03
TNFRSF21-201ENST00000296861 TNNI2P48788 182 aa14.86□□□□□ -0.03
TNFRSF21-201ENST00000296861 PICALMQ13492 652 aa14.86□□□□□ -0.03
TNFRSF21-201ENST00000296861 PKN1Q16512 942 aa14.86□□□□□ -0.03
TNFRSF21-201ENST00000296861 CNOT6LQ96LI5 555 aaKnown RBP14.86□□□□□ -0.03
TNFRSF21-201ENST00000296861 CYP19A1P11511 503 aaPredicted RBP14.86□□□□□ -0.03
TNFRSF21-201ENST00000296861 SARSP49591 514 aaKnown RBP14.86□□□□□ -0.03
TNFRSF21-201ENST00000296861 TTC31Q49AM3 519 aaPredicted RBP14.86□□□□□ -0.03
TNFRSF21-201ENST00000296861 TCERG1LQ5VWI1 586 aa14.86□□□□□ -0.03
TNFRSF21-201ENST00000296861 KLHL7Q8IXQ5 586 aa14.86□□□□□ -0.03
TNFRSF21-201ENST00000296861 CCDC155Q8N6L0 562 aa14.86□□□□□ -0.03
TNFRSF21-201ENST00000296861 SLC4A9Q96Q91 983 aa14.86□□□□□ -0.03
TNFRSF21-201ENST00000296861 PACSIN2Q9UNF0 486 aaPredicted RBP14.86□□□□□ -0.03
TNFRSF21-201ENST00000296861 BMP15O95972 392 aa14.85□□□□□ -0.03
TNFRSF21-201ENST00000296861 DDB1Q16531 1140 aa14.85□□□□□ -0.03
TNFRSF21-201ENST00000296861 CABP7Q86V35 215 aa14.85□□□□□ -0.03
TNFRSF21-201ENST00000296861 DNAAF5Q86Y56 855 aa14.85□□□□□ -0.03
TNFRSF21-201ENST00000296861 NHEJ1Q9H9Q4 299 aaPredicted RBP14.85□□□□□ -0.03
TNFRSF21-201ENST00000296861 FBXO3Q9UK99 471 aa14.85□□□□□ -0.03
TNFRSF21-201ENST00000296861 L1RE1Q9UN81 338 aa14.85□□□□□ -0.03
TNFRSF21-201ENST00000296861 TMCO5BA8MYB1 307 aa14.85□□□□□ -0.03
TNFRSF21-201ENST00000296861 TACC1O75410 805 aa14.85□□□□□ -0.03
TNFRSF21-201ENST00000296861 RASSF7Q02833 373 aa14.85□□□□□ -0.03
TNFRSF21-201ENST00000296861 MB21D1Q8N884 522 aa14.85□□□□□ -0.03
TNFRSF21-201ENST00000296861 BCAS4Q8TDM0 211 aa14.85□□□□□ -0.03
TNFRSF21-201ENST00000296861 SEPT11Q9NVA2 429 aaKnown RBP14.85□□□□□ -0.03
TNFRSF21-201ENST00000296861 CRKLP46109 303 aaKnown RBP14.85□□□□□ -0.03
TNFRSF21-201ENST00000296861 ERFEQ4G0M1 354 aa14.85□□□□□ -0.03
TNFRSF21-201ENST00000296861 ZNF658Q5TYW1 1059 aaPredicted RBP14.85□□□□□ -0.03
TNFRSF21-201ENST00000296861 NFRKBQ6P4R8 1299 aa14.85□□□□□ -0.03
TNFRSF21-201ENST00000296861 TMTC3Q6ZXV5 915 aa14.85□□□□□ -0.03
TNFRSF21-201ENST00000296861 CELF1Q92879 486 aaKnown RBP14.85□□□□□ -0.03
TNFRSF21-201ENST00000296861 LMTK3Q96Q04 1460 aa14.84□□□□□ -0.03
TNFRSF21-201ENST00000296861 PLCG1P19174 1290 aa14.84□□□□□ -0.03
TNFRSF21-201ENST00000296861 MAGEA1P43355 309 aa14.84□□□□□ -0.03
TNFRSF21-201ENST00000296861 MNAT1P51948 309 aa14.84□□□□□ -0.03
TNFRSF21-201ENST00000296861 IKQ13123 557 aaPredicted RBP14.84□□□□□ -0.03
TNFRSF21-201ENST00000296861 SHISA4Q96DD7 197 aa14.84□□□□□ -0.03
TNFRSF21-201ENST00000296861 FRMPD2Q68DX3 1309 aaPredicted RBP14.84□□□□□ -0.03
TNFRSF21-201ENST00000296861 TULP2O00295 520 aa14.84□□□□□ -0.03
TNFRSF21-201ENST00000296861 MPHOSPH10O00566 681 aaKnown RBP14.84□□□□□ -0.03
TNFRSF21-201ENST00000296861 USP17L2Q6R6M4 530 aa14.84□□□□□ -0.03
TNFRSF21-201ENST00000296861 SRLQ86TD4 932 aa14.84□□□□□ -0.03
TNFRSF21-201ENST00000296861 SH2D3CQ8N5H7 860 aa14.84□□□□□ -0.03
TNFRSF21-201ENST00000296861 HDAC7Q8WUI4 952 aa14.84□□□□□ -0.03
TNFRSF21-201ENST00000296861 PHF20Q9BVI0 1012 aa14.84□□□□□ -0.03
TNFRSF21-201ENST00000296861 HAUS4Q9H6D7 363 aa14.84□□□□□ -0.03
TNFRSF21-201ENST00000296861 RBM28Q9NW13 759 aaKnown RBP14.84□□□□□ -0.03
TNFRSF21-201ENST00000296861 SEC63Q9UGP8 760 aaKnown RBP14.84□□□□□ -0.03
TNFRSF21-201ENST00000296861 PRPF3O43395 683 aaKnown RBP14.84□□□□□ -0.03
TNFRSF21-201ENST00000296861 GNGT1P63211 74 aa14.84□□□□□ -0.03
TNFRSF21-201ENST00000296861 MECOMQ03112 1051 aa14.84□□□□□ -0.03
TNFRSF21-201ENST00000296861 PRPF4BQ13523 1007 aaKnown RBP14.84□□□□□ -0.03
TNFRSF21-201ENST00000296861 TRIM31Q9BZY9 425 aa14.84□□□□□ -0.03
TNFRSF21-201ENST00000296861 GPCPD1Q9NPB8 672 aa14.84□□□□□ -0.03
TNFRSF21-201ENST00000296861 RWDD2AQ9UIY3 292 aa14.84□□□□□ -0.03
TNFRSF21-201ENST00000296861 CAMTA1Q9Y6Y1 1673 aa14.84□□□□□ -0.03
TNFRSF21-201ENST00000296861 STK36Q9NRP7 1315 aa14.84□□□□□ -0.03
TNFRSF21-201ENST00000296861 ABCC12Q96J65 1359 aa14.84□□□□□ -0.03
TNFRSF21-201ENST00000296861 SHTN1A0MZ66 631 aa14.83□□□□□ -0.03
TNFRSF21-201ENST00000296861 EIF3CLB5ME19 914 aaKnown RBP14.83□□□□□ -0.03
TNFRSF21-201ENST00000296861 TRAF5O00463 557 aa14.83□□□□□ -0.03
TNFRSF21-201ENST00000296861 FTCDO95954 541 aa14.83□□□□□ -0.03
TNFRSF21-201ENST00000296861 BRD2P25440 801 aaKnown RBP14.83□□□□□ -0.03
TNFRSF21-201ENST00000296861 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.83□□□□□ -0.03
TNFRSF21-201ENST00000296861 ZNF579Q8NAF0 562 aaKnown RBP14.83□□□□□ -0.03
TNFRSF21-201ENST00000296861 CALML4Q96GE6 196 aa14.83□□□□□ -0.03
TNFRSF21-201ENST00000296861 MS4A14Q96JA4 679 aa14.83□□□□□ -0.03
TNFRSF21-201ENST00000296861 EIF3CQ99613 913 aaKnown RBP14.83□□□□□ -0.03
TNFRSF21-201ENST00000296861 MYBL2P10244 700 aa14.83□□□□□ -0.04
TNFRSF21-201ENST00000296861 STK4Q13043 487 aa14.83□□□□□ -0.04
TNFRSF21-201ENST00000296861 RAPGEF1Q13905 1077 aa14.83□□□□□ -0.04
TNFRSF21-201ENST00000296861 RRP36Q96EU6 259 aaKnown RBP14.83□□□□□ -0.04
TNFRSF21-201ENST00000296861 MTRQ99707 1265 aa14.83□□□□□ -0.04
TNFRSF21-201ENST00000296861 SELENOOQ9BVL4 669 aa14.83□□□□□ -0.04
TNFRSF21-201ENST00000296861 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.83□□□□□ -0.049e-36■■■■■ 857.1
TNFRSF21-201ENST00000296861 FAM205AQ6ZU69 1335 aa14.83□□□□□ -0.04
TNFRSF21-201ENST00000296861 SMIM23A6NLE4 172 aa14.83□□□□□ -0.04
TNFRSF21-201ENST00000296861 H7C1D1 291 aa14.83□□□□□ -0.04
TNFRSF21-201ENST00000296861 BACH1O14867 736 aa14.83□□□□□ -0.04
TNFRSF21-201ENST00000296861 CKAP4Q07065 602 aaKnown RBP14.83□□□□□ -0.04
TNFRSF21-201ENST00000296861 TROAPQ12815 778 aa14.83□□□□□ -0.04
TNFRSF21-201ENST00000296861 NBPF5PQ86XG9 351 aaPredicted RBP14.83□□□□□ -0.04
TNFRSF21-201ENST00000296861 VGLL2Q8N8G2 317 aa14.83□□□□□ -0.04
TNFRSF21-201ENST00000296861 FAM71BQ8TC56 605 aa14.83□□□□□ -0.04
TNFRSF21-201ENST00000296861 DISC1Q9NRI5 854 aa14.83□□□□□ -0.04
TNFRSF21-201ENST00000296861 WDR19Q8NEZ3 1342 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms