RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 TSKSQ9UJT2 592 aa26.22■■□□□ 1.79
LINC01116-201ENST00000295549 PNMA2Q9UL42 364 aa26.22■■□□□ 1.79
LINC01116-201ENST00000295549 ICAM1P05362 532 aa26.22■■□□□ 1.79
LINC01116-201ENST00000295549 HSPA1AP0DMV8 641 aaKnown RBP26.22■■□□□ 1.79
LINC01116-201ENST00000295549 HSPA1BP0DMV9 641 aaKnown RBP26.22■■□□□ 1.79
LINC01116-201ENST00000295549 SNAP25P60880 206 aa26.22■■□□□ 1.79
LINC01116-201ENST00000295549 SCRN1Q12765 414 aa26.22■■□□□ 1.79
LINC01116-201ENST00000295549 NTRK3Q16288 839 aa26.22■■□□□ 1.79
LINC01116-201ENST00000295549 CDC37Q16543 378 aaPredicted RBP26.22■■□□□ 1.79
LINC01116-201ENST00000295549 RAVER2Q9HCJ3 691 aaKnown RBP26.22■■□□□ 1.79
LINC01116-201ENST00000295549 SH2B1Q9NRF2 756 aaPredicted RBP26.22■■□□□ 1.79
LINC01116-201ENST00000295549 A0A0G2JMZ2 1700 aa26.22■■□□□ 1.79
LINC01116-201ENST00000295549 ZBTB5O15062 677 aa26.21■■□□□ 1.79
LINC01116-201ENST00000295549 CD2BP2O95400 341 aaKnown RBP26.21■■□□□ 1.79
LINC01116-201ENST00000295549 PLS1Q14651 629 aa26.21■■□□□ 1.79
LINC01116-201ENST00000295549 RIOX2Q8IUF8 465 aa26.21■■□□□ 1.79
LINC01116-201ENST00000295549 CPXCR1Q8N123 301 aa26.21■■□□□ 1.79
LINC01116-201ENST00000295549 CCDC82Q8N4S0 544 aa26.21■■□□□ 1.79
LINC01116-201ENST00000295549 MOV10L1Q9BXT6 1211 aaKnown RBP26.21■■□□□ 1.79
LINC01116-201ENST00000295549 FOXN1O15353 648 aa26.2■■□□□ 1.78
LINC01116-201ENST00000295549 LARGE1O95461 756 aa26.2■■□□□ 1.78
LINC01116-201ENST00000295549 SLC25A27O95847 323 aa26.2■■□□□ 1.78
LINC01116-201ENST00000295549 IFNAR1P17181 557 aa26.2■■□□□ 1.78
LINC01116-201ENST00000295549 QRICH1Q2TAL8 776 aa26.2■■□□□ 1.78
LINC01116-201ENST00000295549 CCDC174Q6PII3 467 aa26.2■■□□□ 1.78
LINC01116-201ENST00000295549 SHCBP1Q8NEM2 672 aa26.2■■□□□ 1.78
LINC01116-201ENST00000295549 GTF3C6Q969F1 213 aa26.2■■□□□ 1.78
LINC01116-201ENST00000295549 RRP36Q96EU6 259 aaKnown RBP26.2■■□□□ 1.78
LINC01116-201ENST00000295549 PIGSQ96S52 555 aa26.2■■□□□ 1.78
LINC01116-201ENST00000295549 PNMA6FA0A0J9YX94 578 aa26.19■■□□□ 1.78
LINC01116-201ENST00000295549 CPLX1O14810 134 aa26.19■■□□□ 1.78
LINC01116-201ENST00000295549 FKTNO75072 461 aa26.19■■□□□ 1.78
LINC01116-201ENST00000295549 COPB2P35606 906 aa26.19■■□□□ 1.78
LINC01116-201ENST00000295549 LACTBP83111 547 aaPredicted RBP26.19■■□□□ 1.78
LINC01116-201ENST00000295549 SNRNP48Q6IEG0 339 aaKnown RBP26.19■■□□□ 1.78
LINC01116-201ENST00000295549 ZNF296Q8WUU4 475 aaPredicted RBP26.19■■□□□ 1.78
LINC01116-201ENST00000295549 AGBL1Q96MI9 1066 aa26.19■■□□□ 1.78
LINC01116-201ENST00000295549 CNTNAP5Q8WYK1 1306 aa26.18■■□□□ 1.78
LINC01116-201ENST00000295549 CTCFP49711 727 aaPredicted RBP26.18■■□□□ 1.78
LINC01116-201ENST00000295549 CPLX2Q6PUV4 134 aaKnown RBP26.18■■□□□ 1.78
LINC01116-201ENST00000295549 HSPA8P11142 646 aaKnown RBP26.17■■□□□ 1.78
LINC01116-201ENST00000295549 MAPK4P31152 587 aa26.17■■□□□ 1.78
LINC01116-201ENST00000295549 TKFCQ3LXA3 575 aa26.17■■□□□ 1.78
LINC01116-201ENST00000295549 HOMER1Q86YM7 354 aa26.17■■□□□ 1.78
LINC01116-201ENST00000295549 NECAB1Q8N987 351 aa26.17■■□□□ 1.78
LINC01116-201ENST00000295549 PORCNQ9H237 461 aa26.17■■□□□ 1.78
LINC01116-201ENST00000295549 SEC63Q9UGP8 760 aaKnown RBP26.17■■□□□ 1.78
LINC01116-201ENST00000295549 CCPG1Q9ULG6 757 aa26.17■■□□□ 1.78
LINC01116-201ENST00000295549 ERCC3P19447 782 aa26.16■■□□□ 1.78
LINC01116-201ENST00000295549 FBXO11Q86XK2 927 aa26.16■■□□□ 1.78
LINC01116-201ENST00000295549 AMNQ9BXJ7 453 aa26.16■■□□□ 1.78
LINC01116-201ENST00000295549 MROH8Q9H579 483 aa26.16■■□□□ 1.78
LINC01116-201ENST00000295549 RBM27Q9P2N5 1060 aaKnown RBP26.16■■□□□ 1.78
LINC01116-201ENST00000295549 RIPK3Q9Y572 518 aa26.16■■□□□ 1.78
LINC01116-201ENST00000295549 V9GY48 417 aaPredicted RBP26.16■■□□□ 1.78
LINC01116-201ENST00000295549 PRPF3O43395 683 aaKnown RBP26.15■■□□□ 1.78
LINC01116-201ENST00000295549 CDKL5O76039 1030 aa26.15■■□□□ 1.78
LINC01116-201ENST00000295549 TRAF1Q13077 416 aa26.15■■□□□ 1.78
LINC01116-201ENST00000295549 KIF22Q14807 665 aa26.15■■□□□ 1.78
LINC01116-201ENST00000295549 CCAR1Q8IX12 1150 aaKnown RBP26.15■■□□□ 1.78
LINC01116-201ENST00000295549 ERO1AQ96HE7 468 aa26.15■■□□□ 1.78
LINC01116-201ENST00000295549 RNF26Q9BY78 433 aaPredicted RBP26.15■■□□□ 1.78
LINC01116-201ENST00000295549 EFCC1Q9HA90 598 aa26.15■■□□□ 1.78
LINC01116-201ENST00000295549 PPP1R11O60927 126 aaPredicted RBP26.14■■□□□ 1.78
LINC01116-201ENST00000295549 NCAPG2Q86XI2 1143 aa26.14■■□□□ 1.78
LINC01116-201ENST00000295549 CHST13Q8NET6 341 aa26.14■■□□□ 1.78
LINC01116-201ENST00000295549 PIBF1Q8WXW3 757 aa26.14■■□□□ 1.78
LINC01116-201ENST00000295549 PHKBQ93100 1093 aa26.14■■□□□ 1.78
LINC01116-201ENST00000295549 SNX21Q969T3 373 aa26.14■■□□□ 1.78
LINC01116-201ENST00000295549 TMX3Q96JJ7 454 aa26.14■■□□□ 1.78
LINC01116-201ENST00000295549 BAZ2BQ9UIF8 2168 aaKnown RBP26.14■■□□□ 1.78
LINC01116-201ENST00000295549 ST3GAL1Q11201 340 aa26.14■■□□□ 1.77
LINC01116-201ENST00000295549 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.14■■□□□ 1.77
LINC01116-201ENST00000295549 TRERF1Q96PN7 1200 aa26.14■■□□□ 1.77
LINC01116-201ENST00000295549 FBXO40Q9UH90 709 aa26.14■■□□□ 1.77
LINC01116-201ENST00000295549 COL11A1P12107 1806 aaPredicted RBP26.13■■□□□ 1.77
LINC01116-201ENST00000295549 FMNL1O95466 1100 aaPredicted RBP26.13■■□□□ 1.77
LINC01116-201ENST00000295549 ALAS1P13196 640 aa26.13■■□□□ 1.77
LINC01116-201ENST00000295549 CTGFP29279 349 aa26.13■■□□□ 1.77
LINC01116-201ENST00000295549 PSMC4P43686 418 aa26.13■■□□□ 1.77
LINC01116-201ENST00000295549 FCGRTP55899 365 aa26.13■■□□□ 1.77
LINC01116-201ENST00000295549 SSRP1Q08945 709 aaKnown RBP26.13■■□□□ 1.77
LINC01116-201ENST00000295549 TRIM22Q8IYM9 498 aa26.13■■□□□ 1.77
LINC01116-201ENST00000295549 PCDHA1Q9Y5I3 950 aa26.13■■□□□ 1.77
LINC01116-201ENST00000295549 hCG_1642624A0A1W2PR95 340 aa26.12■■□□□ 1.77
LINC01116-201ENST00000295549 STRNO43815 780 aa26.12■■□□□ 1.77
LINC01116-201ENST00000295549 CTDNEP1O95476 244 aa26.12■■□□□ 1.77
LINC01116-201ENST00000295549 SLC4A3P48751 1232 aa26.12■■□□□ 1.77
LINC01116-201ENST00000295549 LBX1P52954 281 aa26.12■■□□□ 1.77
LINC01116-201ENST00000295549 AKAP17AQ02040 695 aaKnown RBP26.12■■□□□ 1.77
LINC01116-201ENST00000295549 ARHGEF6Q15052 776 aa26.12■■□□□ 1.77
LINC01116-201ENST00000295549 USH1GQ495M9 461 aa26.12■■□□□ 1.77
LINC01116-201ENST00000295549 GPR142Q7Z601 462 aa26.12■■□□□ 1.77
LINC01116-201ENST00000295549 PLEKHH3Q7Z736 793 aa26.12■■□□□ 1.77
LINC01116-201ENST00000295549 CD99L2Q8TCZ2 262 aa26.12■■□□□ 1.77
LINC01116-201ENST00000295549 TRIM47Q96LD4 638 aa26.12■■□□□ 1.77
LINC01116-201ENST00000295549 SLC26A6Q9BXS9 759 aa26.12■■□□□ 1.77
LINC01116-201ENST00000295549 ARHGAP39Q9C0H5 1083 aa26.12■■□□□ 1.77
LINC01116-201ENST00000295549 RNF146Q9NTX7 359 aa26.12■■□□□ 1.77
LINC01116-201ENST00000295549 ABCB11O95342 1321 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms