RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 FMNL1O95466 1100 aaPredicted RBP19.59■□□□□ 0.73
CDC42EP3-201ENST00000295324 TRIM28Q13263 835 aaKnown RBP19.59■□□□□ 0.73
CDC42EP3-201ENST00000295324 SP8Q8IXZ3 490 aa19.59■□□□□ 0.73
CDC42EP3-201ENST00000295324 STMN4Q9H169 189 aaPredicted RBP19.59■□□□□ 0.73
CDC42EP3-201ENST00000295324 FOXP1Q9H334 677 aaPredicted RBP19.59■□□□□ 0.73
CDC42EP3-201ENST00000295324 CYP2J2P51589 502 aa19.59■□□□□ 0.73
CDC42EP3-201ENST00000295324 IGBP1P78318 339 aa19.59■□□□□ 0.73
CDC42EP3-201ENST00000295324 DIP2CQ9Y2E4 1556 aa19.59■□□□□ 0.73
CDC42EP3-201ENST00000295324 SCRN1Q12765 414 aa19.59■□□□□ 0.73
CDC42EP3-201ENST00000295324 CCDC114Q96M63 670 aa19.59■□□□□ 0.73
CDC42EP3-201ENST00000295324 AGLP35573 1532 aa19.59■□□□□ 0.73
CDC42EP3-201ENST00000295324 MCAMP43121 646 aa19.59■□□□□ 0.73
CDC42EP3-201ENST00000295324 MTX1Q13505 466 aa19.59■□□□□ 0.73
CDC42EP3-201ENST00000295324 AOC3Q16853 763 aa19.59■□□□□ 0.73
CDC42EP3-201ENST00000295324 ZNF710Q8N1W2 664 aa19.59■□□□□ 0.73
CDC42EP3-201ENST00000295324 SLC7A3Q8WY07 619 aa19.59■□□□□ 0.73
CDC42EP3-201ENST00000295324 CMA1P23946 247 aa19.58■□□□□ 0.73
CDC42EP3-201ENST00000295324 EXOC8Q8IYI6 725 aa19.58■□□□□ 0.73
CDC42EP3-201ENST00000295324 PIGSQ96S52 555 aa19.58■□□□□ 0.73
CDC42EP3-201ENST00000295324 PANK4Q9NVE7 773 aa19.58■□□□□ 0.73
CDC42EP3-201ENST00000295324 CYP4A11Q02928 519 aa19.58■□□□□ 0.73
CDC42EP3-201ENST00000295324 PROCA1Q8NCQ7 364 aaPredicted RBP19.58■□□□□ 0.73
CDC42EP3-201ENST00000295324 SLC17A8Q8NDX2 589 aa19.58■□□□□ 0.73
CDC42EP3-201ENST00000295324 CAPZA3Q96KX2 299 aa19.58■□□□□ 0.73
CDC42EP3-201ENST00000295324 ZNF341Q9BYN7 854 aa19.58■□□□□ 0.73
CDC42EP3-201ENST00000295324 MAGEF1Q9HAY2 307 aa19.58■□□□□ 0.73
CDC42EP3-201ENST00000295324 RASEFQ8IZ41 740 aa19.58■□□□□ 0.73
CDC42EP3-201ENST00000295324 RETREG2Q8NC44 543 aa19.58■□□□□ 0.73
CDC42EP3-201ENST00000295324 ZKSCAN5Q9Y2L8 839 aa19.58■□□□□ 0.73
CDC42EP3-201ENST00000295324 CLTCQ00610 1675 aaKnown RBP19.58■□□□□ 0.72
CDC42EP3-201ENST00000295324 N4BP1O75113 896 aaKnown RBP19.58■□□□□ 0.72
CDC42EP3-201ENST00000295324 XRCC6P12956 609 aaKnown RBP eCLIP19.58■□□□□ 0.72
CDC42EP3-201ENST00000295324 CCND2P30279 289 aa19.58■□□□□ 0.72
CDC42EP3-201ENST00000295324 KLHL30Q0D2K2 578 aa19.58■□□□□ 0.72
CDC42EP3-201ENST00000295324 EPHA10Q5JZY3 1008 aa19.58■□□□□ 0.72
CDC42EP3-201ENST00000295324 DGKHQ86XP1 1220 aa19.58■□□□□ 0.72
CDC42EP3-201ENST00000295324 IPO4Q8TEX9 1081 aaKnown RBP19.58■□□□□ 0.72
CDC42EP3-201ENST00000295324 BARGINQ6ZT62 677 aa19.58■□□□□ 0.72
CDC42EP3-201ENST00000295324 APOBEC3FQ8IUX4 373 aaKnown RBP19.58■□□□□ 0.72
CDC42EP3-201ENST00000295324 FAM204AQ9H8W3 233 aa19.58■□□□□ 0.72
CDC42EP3-201ENST00000295324 ARFGAP3Q9NP61 516 aa19.58■□□□□ 0.72
CDC42EP3-201ENST00000295324 RTEL1Q9NZ71 1219 aa19.58■□□□□ 0.72
CDC42EP3-201ENST00000295324 CTTNBP2NLQ9P2B4 639 aa19.58■□□□□ 0.72
CDC42EP3-201ENST00000295324 MKRN3Q13064 507 aaKnown RBP19.57■□□□□ 0.72
CDC42EP3-201ENST00000295324 SPECC1LQ69YQ0 1117 aa19.57■□□□□ 0.72
CDC42EP3-201ENST00000295324 SEPT14Q6ZU15 432 aa19.57■□□□□ 0.72
CDC42EP3-201ENST00000295324 UBL4BQ8N7F7 174 aa19.57■□□□□ 0.72
CDC42EP3-201ENST00000295324 ZHX1Q9UKY1 873 aaPredicted RBP19.57■□□□□ 0.72
CDC42EP3-201ENST00000295324 RGS12O14924 1447 aa19.57■□□□□ 0.72
CDC42EP3-201ENST00000295324 MICALCLQ6ZW33 695 aa19.57■□□□□ 0.72
CDC42EP3-201ENST00000295324 PRKAG2Q9UGJ0 569 aa19.57■□□□□ 0.72
CDC42EP3-201ENST00000295324 MTMR6Q9Y217 621 aa19.57■□□□□ 0.72
CDC42EP3-201ENST00000295324 SOS2Q07890 1332 aaPredicted RBP19.57■□□□□ 0.72
CDC42EP3-201ENST00000295324 GTPBP6O43824 516 aaPredicted RBP19.57■□□□□ 0.72
CDC42EP3-201ENST00000295324 ADCK5Q3MIX3 580 aa19.57■□□□□ 0.72
CDC42EP3-201ENST00000295324 TDRD3Q9H7E2 651 aaKnown RBP19.57■□□□□ 0.72
CDC42EP3-201ENST00000295324 ZNF277Q9NRM2 450 aaPredicted RBP19.57■□□□□ 0.72
CDC42EP3-201ENST00000295324 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.57■□□□□ 0.72
CDC42EP3-201ENST00000295324 ARMCX3Q9UH62 379 aaPredicted RBP19.57■□□□□ 0.72
CDC42EP3-201ENST00000295324 PTPRMP28827 1452 aa19.57■□□□□ 0.72
CDC42EP3-201ENST00000295324 FAM26FQ5R3K3 315 aa19.57■□□□□ 0.72
CDC42EP3-201ENST00000295324 MIS18BP1Q6P0N0 1132 aa19.57■□□□□ 0.72
CDC42EP3-201ENST00000295324 TMTC1Q8IUR5 882 aa19.57■□□□□ 0.72
CDC42EP3-201ENST00000295324 STRBPQ96SI9 672 aaKnown RBP19.57■□□□□ 0.72
CDC42EP3-201ENST00000295324 LIFRP42702 1097 aa19.56■□□□□ 0.72
CDC42EP3-201ENST00000295324 CCDC125Q86Z20 511 aa19.56■□□□□ 0.72
CDC42EP3-201ENST00000295324 IQCA1LA6NCM1 817 aa19.56■□□□□ 0.72
CDC42EP3-201ENST00000295324 GH2P01242 217 aa19.56■□□□□ 0.72
CDC42EP3-201ENST00000295324 CBX1P83916 185 aa19.56■□□□□ 0.72
CDC42EP3-201ENST00000295324 USP17L2Q6R6M4 530 aa19.56■□□□□ 0.72
CDC42EP3-201ENST00000295324 ZSWIM5Q9P217 1185 aa19.56■□□□□ 0.72
CDC42EP3-201ENST00000295324 CDC42BPBQ9Y5S2 1711 aa19.56■□□□□ 0.72
CDC42EP3-201ENST00000295324 STK10O94804 968 aaKnown RBP19.56■□□□□ 0.72
CDC42EP3-201ENST00000295324 ERCC5P28715 1186 aaPredicted RBP19.56■□□□□ 0.72
CDC42EP3-201ENST00000295324 PNOCQ13519 176 aa19.56■□□□□ 0.72
CDC42EP3-201ENST00000295324 CCDC26Q8TAB7 109 aa19.56■□□□□ 0.72
CDC42EP3-201ENST00000295324 METTL14Q9HCE5 456 aaKnown RBP19.56■□□□□ 0.72
CDC42EP3-201ENST00000295324 XPOTO43592 962 aaKnown RBP19.56■□□□□ 0.72
CDC42EP3-201ENST00000295324 ERCC3P19447 782 aa19.56■□□□□ 0.72
CDC42EP3-201ENST00000295324 PRDX5P30044 214 aa19.56■□□□□ 0.72
CDC42EP3-201ENST00000295324 VAV2P52735 878 aa19.56■□□□□ 0.72
CDC42EP3-201ENST00000295324 UBXN2AP68543 259 aa19.56■□□□□ 0.72
CDC42EP3-201ENST00000295324 ARMCX5Q6P1M9 558 aa19.56■□□□□ 0.72
CDC42EP3-201ENST00000295324 AK8Q96MA6 479 aa19.56■□□□□ 0.72
CDC42EP3-201ENST00000295324 RIOK1Q9BRS2 568 aaKnown RBP19.56■□□□□ 0.72
CDC42EP3-201ENST00000295324 CUEDC2Q9H467 287 aa19.56■□□□□ 0.72
CDC42EP3-201ENST00000295324 SEPT9Q9UHD8 586 aaPredicted RBP19.56■□□□□ 0.72
CDC42EP3-201ENST00000295324 TRPM1Q7Z4N2 1603 aa19.56■□□□□ 0.72
CDC42EP3-201ENST00000295324 SH2B2O14492 632 aaPredicted RBP19.56■□□□□ 0.72
CDC42EP3-201ENST00000295324 SFMBT2Q5VUG0 894 aa19.56■□□□□ 0.72
CDC42EP3-201ENST00000295324 TRIML1Q8N9V2 468 aa19.56■□□□□ 0.72
CDC42EP3-201ENST00000295324 CAMSAP1Q5T5Y3 1602 aa19.56■□□□□ 0.72
CDC42EP3-201ENST00000295324 CYP2D7A0A087X1C5 515 aa19.55■□□□□ 0.72
CDC42EP3-201ENST00000295324 TMEM191BP0C7N4 346 aa19.55■□□□□ 0.72
CDC42EP3-201ENST00000295324 IFNAR1P17181 557 aa19.55■□□□□ 0.72
CDC42EP3-201ENST00000295324 CD2APQ9Y5K6 639 aa19.55■□□□□ 0.72
CDC42EP3-201ENST00000295324 NDC80O14777 642 aa19.55■□□□□ 0.72
CDC42EP3-201ENST00000295324 SLU7O95391 586 aaKnown RBP19.55■□□□□ 0.72
CDC42EP3-201ENST00000295324 TUBBP07437 444 aa19.55■□□□□ 0.72
CDC42EP3-201ENST00000295324 MAGEA1P43355 309 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms