RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 COA7Q96BR5 231 aa17.52■□□□□ 0.39
CCDC140-201ENST00000295226 SHISA4Q96DD7 197 aa17.52■□□□□ 0.39
CCDC140-201ENST00000295226 HOXC10Q9NYD6 342 aa17.52■□□□□ 0.39
CCDC140-201ENST00000295226 WDR33Q9C0J8 1336 aaKnown RBP17.51■□□□□ 0.39
CCDC140-201ENST00000295226 PNMA6FA0A0J9YX94 578 aa17.51■□□□□ 0.39
CCDC140-201ENST00000295226 ZBTB5O15062 677 aa17.51■□□□□ 0.39
CCDC140-201ENST00000295226 OSBPP22059 807 aa17.51■□□□□ 0.39
CCDC140-201ENST00000295226 HERVK_113P62684 666 aa17.51■□□□□ 0.39
CCDC140-201ENST00000295226 GUCY1B3Q02153 619 aa17.51■□□□□ 0.39
CCDC140-201ENST00000295226 USH1GQ495M9 461 aa17.51■□□□□ 0.39
CCDC140-201ENST00000295226 HEATR3Q7Z4Q2 680 aa17.51■□□□□ 0.39
CCDC140-201ENST00000295226 IFNL1Q8IU54 200 aa17.51■□□□□ 0.39
CCDC140-201ENST00000295226 AGBL1Q96MI9 1066 aa17.51■□□□□ 0.39
CCDC140-201ENST00000295226 ALG1Q9BT22 464 aa17.51■□□□□ 0.39
CCDC140-201ENST00000295226 RANBP17Q9H2T7 1088 aaKnown RBP17.51■□□□□ 0.39
CCDC140-201ENST00000295226 RAVER2Q9HCJ3 691 aaKnown RBP17.51■□□□□ 0.39
CCDC140-201ENST00000295226 SEC63Q9UGP8 760 aaKnown RBP17.51■□□□□ 0.39
CCDC140-201ENST00000295226 PCNTO95613 3336 aa17.5■□□□□ 0.39
CCDC140-201ENST00000295226 DEXIO95424 95 aa17.5■□□□□ 0.39
CCDC140-201ENST00000295226 SCG2P13521 617 aa17.5■□□□□ 0.39
CCDC140-201ENST00000295226 HMGN5P82970 282 aaKnown RBP17.5■□□□□ 0.39
CCDC140-201ENST00000295226 NOGQ13253 232 aa17.5■□□□□ 0.39
CCDC140-201ENST00000295226 PABPC4Q13310 644 aaKnown RBP eCLIP17.5■□□□□ 0.39
CCDC140-201ENST00000295226 PFKFB3Q16875 520 aaPredicted RBP17.5■□□□□ 0.39
CCDC140-201ENST00000295226 WWC2Q6AWC2 1192 aa17.5■□□□□ 0.39
CCDC140-201ENST00000295226 SLC38A10Q9HBR0 1119 aa17.5■□□□□ 0.39
CCDC140-201ENST00000295226 VPS54Q9P1Q0 977 aa17.5■□□□□ 0.39
CCDC140-201ENST00000295226 ADAMTS5Q9UNA0 930 aa17.5■□□□□ 0.39
CCDC140-201ENST00000295226 STK36Q9NRP7 1315 aa17.5■□□□□ 0.39
CCDC140-201ENST00000295226 COL11A1P12107 1806 aaPredicted RBP17.5■□□□□ 0.39
CCDC140-201ENST00000295226 ZBED4O75132 1171 aa17.49■□□□□ 0.39
CCDC140-201ENST00000295226 HSPA6P17066 643 aa17.49■□□□□ 0.39
CCDC140-201ENST00000295226 TMEM132BQ14DG7 1078 aa17.49■□□□□ 0.39
CCDC140-201ENST00000295226 TYW1BQ6NUM6 668 aa17.49■□□□□ 0.39
CCDC140-201ENST00000295226 REPS2Q8NFH8 660 aa17.49■□□□□ 0.39
CCDC140-201ENST00000295226 PAGR1Q9BTK6 254 aa17.49■□□□□ 0.39
CCDC140-201ENST00000295226 TXNRD2Q9NNW7 524 aa17.49■□□□□ 0.39
CCDC140-201ENST00000295226 CHMP5Q9NZZ3 219 aa17.49■□□□□ 0.39
CCDC140-201ENST00000295226 BTBD7Q9P203 1132 aa17.49■□□□□ 0.39
CCDC140-201ENST00000295226 CTDP1Q9Y5B0 961 aaPredicted RBP17.49■□□□□ 0.39
CCDC140-201ENST00000295226 ZNF536O15090 1300 aa17.49■□□□□ 0.39
CCDC140-201ENST00000295226 TM4SF4P48230 202 aa17.48■□□□□ 0.39
CCDC140-201ENST00000295226 PLS1Q14651 629 aa17.48■□□□□ 0.39
CCDC140-201ENST00000295226 KCNJ14Q9UNX9 436 aa17.48■□□□□ 0.39
CCDC140-201ENST00000295226 STXBP3O00186 592 aa17.48■□□□□ 0.39
CCDC140-201ENST00000295226 INHBEP58166 350 aa17.48■□□□□ 0.39
CCDC140-201ENST00000295226 SREBF2Q12772 1141 aa17.48■□□□□ 0.39
CCDC140-201ENST00000295226 LARP1BQ659C4 914 aaKnown RBP17.48■□□□□ 0.39
CCDC140-201ENST00000295226 FBXO11Q86XK2 927 aa17.48■□□□□ 0.39
CCDC140-201ENST00000295226 RBPJLQ9UBG7 517 aa17.48■□□□□ 0.39
CCDC140-201ENST00000295226 PNMA3Q9UL41 463 aa17.48■□□□□ 0.39
CCDC140-201ENST00000295226 SLC45A1Q9Y2W3 748 aa17.48■□□□□ 0.39
CCDC140-201ENST00000295226 PCDHA1Q9Y5I3 950 aa17.48■□□□□ 0.39
CCDC140-201ENST00000295226 ADAMTS3O15072 1205 aa17.47■□□□□ 0.39
CCDC140-201ENST00000295226 CNMDO75829 334 aa17.47■□□□□ 0.39
CCDC140-201ENST00000295226 PKP1Q13835 747 aa17.47■□□□□ 0.39
CCDC140-201ENST00000295226 Q3C1V9 767 aa17.47■□□□□ 0.39
CCDC140-201ENST00000295226 LBX2Q6XYB7 198 aa17.47■□□□□ 0.39
CCDC140-201ENST00000295226 SMCR8Q8TEV9 937 aaPredicted RBP17.47■□□□□ 0.39
CCDC140-201ENST00000295226 R3HDMLQ9H3Y0 253 aa17.47■□□□□ 0.39
CCDC140-201ENST00000295226 HOMER2Q9NSB8 354 aa17.47■□□□□ 0.39
CCDC140-201ENST00000295226 ZNF214Q9UL59 606 aaPredicted RBP17.47■□□□□ 0.39
CCDC140-201ENST00000295226 CCPG1Q9ULG6 757 aa17.47■□□□□ 0.39
CCDC140-201ENST00000295226 CIZ1Q9ULV3 898 aaPredicted RBP17.47■□□□□ 0.39
CCDC140-201ENST00000295226 RIPK3Q9Y572 518 aa17.47■□□□□ 0.39
CCDC140-201ENST00000295226 MYPNQ86TC9 1320 aa17.46■□□□□ 0.39
CCDC140-201ENST00000295226 SYT1P21579 422 aa17.46■□□□□ 0.39
CCDC140-201ENST00000295226 TAF1CQ15572 869 aaPredicted RBP17.46■□□□□ 0.39
CCDC140-201ENST00000295226 FOXD4L5Q5VV16 416 aaPredicted RBP17.46■□□□□ 0.39
CCDC140-201ENST00000295226 ANKRD13CQ8N6S4 541 aa17.46■□□□□ 0.39
CCDC140-201ENST00000295226 FOXD4L4Q8WXT5 416 aaPredicted RBP17.46■□□□□ 0.39
CCDC140-201ENST00000295226 WASF1Q92558 559 aa17.46■□□□□ 0.39
CCDC140-201ENST00000295226 C8orf76Q96K31 380 aa17.46■□□□□ 0.39
CCDC140-201ENST00000295226 AMNQ9BXJ7 453 aa17.46■□□□□ 0.39
CCDC140-201ENST00000295226 BARHL2Q9NY43 387 aa17.46■□□□□ 0.39
CCDC140-201ENST00000295226 RBM27Q9P2N5 1060 aaKnown RBP17.46■□□□□ 0.39
CCDC140-201ENST00000295226 CEP350Q5VT06 3117 aa17.46■□□□□ 0.39
CCDC140-201ENST00000295226 ICAM1P05362 532 aa17.45■□□□□ 0.38
CCDC140-201ENST00000295226 ALAS1P13196 640 aa17.45■□□□□ 0.38
CCDC140-201ENST00000295226 DEKP35659 375 aaKnown RBP17.45■□□□□ 0.38
CCDC140-201ENST00000295226 NAPAP54920 295 aa17.45■□□□□ 0.38
CCDC140-201ENST00000295226 SNRNP48Q6IEG0 339 aaKnown RBP17.45■□□□□ 0.38
CCDC140-201ENST00000295226 PARK7Q99497 189 aaKnown RBP17.45■□□□□ 0.38
CCDC140-201ENST00000295226 CPA4Q9UI42 421 aa17.45■□□□□ 0.38
CCDC140-201ENST00000295226 ECM2O94769 699 aaPredicted RBP17.45■□□□□ 0.38
CCDC140-201ENST00000295226 STAT3P40763 770 aa17.45■□□□□ 0.38
CCDC140-201ENST00000295226 KRT40Q6A162 431 aa17.45■□□□□ 0.38
CCDC140-201ENST00000295226 TBC1D5Q92609 795 aa17.45■□□□□ 0.38
CCDC140-201ENST00000295226 CWC22Q9HCG8 908 aaKnown RBP17.45■□□□□ 0.38
CCDC140-201ENST00000295226 VPS37CA5D8V6 355 aaPredicted RBP17.44■□□□□ 0.38
CCDC140-201ENST00000295226 FDX1P10109 184 aa17.44■□□□□ 0.38
CCDC140-201ENST00000295226 NLRP5P59047 1200 aa17.44■□□□□ 0.38
CCDC140-201ENST00000295226 MUM1L1Q5H9M0 696 aa17.44■□□□□ 0.38
CCDC140-201ENST00000295226 SMCO2A6NFE2 343 aa17.43■□□□□ 0.38
CCDC140-201ENST00000295226 H3BQV1 296 aa17.43■□□□□ 0.38
CCDC140-201ENST00000295226 DDIT3P35638 169 aa17.43■□□□□ 0.38
CCDC140-201ENST00000295226 MAP2K2P36507 400 aa17.43■□□□□ 0.38
CCDC140-201ENST00000295226 CRHR2Q13324 411 aa17.43■□□□□ 0.38
CCDC140-201ENST00000295226 IFFO2Q5TF58 517 aa17.43■□□□□ 0.38
CCDC140-201ENST00000295226 MB21D1Q8N884 522 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms