RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 DHX8Q14562 1220 aaKnown RBP15.84■□□□□ 0.13
NXF1-201ENST00000294172 RRAGBQ5VZM2 374 aa15.84■□□□□ 0.13
NXF1-201ENST00000294172 STYK1Q6J9G0 422 aa15.84■□□□□ 0.13
NXF1-201ENST00000294172 ZSCAN29Q8IWY8 852 aaPredicted RBP15.84■□□□□ 0.13
NXF1-201ENST00000294172 FAM177A1Q8N128 213 aaPredicted RBP15.84■□□□□ 0.13
NXF1-201ENST00000294172 REXO1Q8N1G1 1221 aaKnown RBP15.84■□□□□ 0.13
NXF1-201ENST00000294172 ZDHHC15Q96MV8 337 aa15.84■□□□□ 0.13
NXF1-201ENST00000294172 DISC1Q9NRI5 854 aa15.84■□□□□ 0.13
NXF1-201ENST00000294172 PPP1R3GB7ZBB8 358 aa15.83■□□□□ 0.12
NXF1-201ENST00000294172 PTPN14Q15678 1187 aa15.83■□□□□ 0.12
NXF1-201ENST00000294172 STRIP1Q5VSL9 837 aa15.83■□□□□ 0.12
NXF1-201ENST00000294172 SPATA1Q5VX52 437 aa15.83■□□□□ 0.12
NXF1-201ENST00000294172 NEK8Q86SG6 692 aa15.83■□□□□ 0.12
NXF1-201ENST00000294172 TBCKQ8TEA7 893 aa15.83■□□□□ 0.12
NXF1-201ENST00000294172 LAD1O00515 517 aa15.83■□□□□ 0.12
NXF1-201ENST00000294172 AOC3Q16853 763 aa15.83■□□□□ 0.12
NXF1-201ENST00000294172 CCDC96Q2M329 555 aa15.83■□□□□ 0.12
NXF1-201ENST00000294172 DACT2Q5SW24 774 aa15.83■□□□□ 0.12
NXF1-201ENST00000294172 CEP135Q66GS9 1140 aa15.83■□□□□ 0.12
NXF1-201ENST00000294172 TTBK2Q6IQ55 1244 aa15.83■□□□□ 0.12
NXF1-201ENST00000294172 CTNND2Q9UQB3 1225 aa15.83■□□□□ 0.12
NXF1-201ENST00000294172 RPN1P04843 607 aaKnown RBP15.82■□□□□ 0.12
NXF1-201ENST00000294172 OR52Z1P0C646 297 aa15.82■□□□□ 0.12
NXF1-201ENST00000294172 SNHG28P0DPA3 235 aa15.82■□□□□ 0.12
NXF1-201ENST00000294172 SLC16A2P36021 539 aa15.82■□□□□ 0.12
NXF1-201ENST00000294172 ZNF543Q08ER8 600 aa15.82■□□□□ 0.12
NXF1-201ENST00000294172 CT47A1Q5JQC4 288 aaPredicted RBP15.82■□□□□ 0.12
NXF1-201ENST00000294172 ADCY7P51828 1080 aa15.82■□□□□ 0.12
NXF1-201ENST00000294172 E4F1Q66K89 784 aaPredicted RBP15.82■□□□□ 0.12
NXF1-201ENST00000294172 KCTD1Q719H9 257 aa15.82■□□□□ 0.12
NXF1-201ENST00000294172 ADGRF4Q8IZF3 695 aa15.82■□□□□ 0.12
NXF1-201ENST00000294172 MAPK8IP1Q9UQF2 711 aa15.82■□□□□ 0.12
NXF1-201ENST00000294172 QSER1Q2KHR3 1735 aa15.81■□□□□ 0.12
NXF1-201ENST00000294172 DDTLA6NHG4 134 aaPredicted RBP15.81■□□□□ 0.12
NXF1-201ENST00000294172 PRPHP41219 470 aa15.81■□□□□ 0.12
NXF1-201ENST00000294172 GLIPR1L2Q4G1C9 344 aa15.81■□□□□ 0.12
NXF1-201ENST00000294172 NAALADL2Q58DX5 795 aa15.81■□□□□ 0.12
NXF1-201ENST00000294172 SPECC1LQ69YQ0 1117 aa15.81■□□□□ 0.12
NXF1-201ENST00000294172 UBE2Q2Q8WVN8 375 aa15.81■□□□□ 0.12
NXF1-201ENST00000294172 JMJD4Q9H9V9 463 aa15.81■□□□□ 0.12
NXF1-201ENST00000294172 TECP42680 631 aa15.8■□□□□ 0.12
NXF1-201ENST00000294172 SHROOM1Q2M3G4 852 aaPredicted RBP15.8■□□□□ 0.12
NXF1-201ENST00000294172 NYAP1Q6ZVC0 841 aa15.8■□□□□ 0.12
NXF1-201ENST00000294172 CNKSR1Q969H4 720 aa15.8■□□□□ 0.12
NXF1-201ENST00000294172 TRIM34Q9BYJ4 488 aa15.8■□□□□ 0.12
NXF1-201ENST00000294172 DNAJC18Q9H819 358 aa15.8■□□□□ 0.12
NXF1-201ENST00000294172 RMND1Q9NWS8 449 aa15.8■□□□□ 0.12
NXF1-201ENST00000294172 MYO3BQ8WXR4 1341 aa15.8■□□□□ 0.12
NXF1-201ENST00000294172 ESYT2A0FGR8 921 aa15.8■□□□□ 0.12
NXF1-201ENST00000294172 hCG_1984214I3L0E3 225 aa15.8■□□□□ 0.12
NXF1-201ENST00000294172 GTF2F1P35269 517 aaKnown RBP eCLIP15.8■□□□□ 0.129e-11■■■■□ 23
NXF1-201ENST00000294172 EN1Q05925 392 aaPredicted RBP15.8■□□□□ 0.12
NXF1-201ENST00000294172 EZH2Q15910 746 aaKnown RBP15.8■□□□□ 0.12
NXF1-201ENST00000294172 ZNF713Q8N859 430 aaPredicted RBP15.8■□□□□ 0.12
NXF1-201ENST00000294172 MAP7D2Q96T17 732 aa15.8■□□□□ 0.12
NXF1-201ENST00000294172 FAM198AQ9UFP1 575 aa15.8■□□□□ 0.12
NXF1-201ENST00000294172 GDAQ9Y2T3 454 aa15.8■□□□□ 0.12
NXF1-201ENST00000294172 MYH8P13535 1937 aa15.8■□□□□ 0.12
NXF1-201ENST00000294172 SLX4Q8IY92 1834 aa15.8■□□□□ 0.12
NXF1-201ENST00000294172 PNMA6FA0A0J9YX94 578 aa15.79■□□□□ 0.12
NXF1-201ENST00000294172 NR1I3Q14994 352 aa15.79■□□□□ 0.12
NXF1-201ENST00000294172 SLC15A2Q16348 729 aa15.79■□□□□ 0.12
NXF1-201ENST00000294172 ZNF658Q5TYW1 1059 aaPredicted RBP15.79■□□□□ 0.12
NXF1-201ENST00000294172 CABP7Q86V35 215 aa15.79■□□□□ 0.12
NXF1-201ENST00000294172 POTEDQ86YR6 584 aa15.79■□□□□ 0.12
NXF1-201ENST00000294172 CREBRFQ8IUR6 639 aa15.79■□□□□ 0.12
NXF1-201ENST00000294172 CCDC112Q8NEF3 446 aa15.79■□□□□ 0.12
NXF1-201ENST00000294172 PPP1R13BQ96KQ4 1090 aa15.79■□□□□ 0.12
NXF1-201ENST00000294172 CCSER1Q9C0I3 900 aa15.79■□□□□ 0.12
NXF1-201ENST00000294172 EHD4Q9H223 541 aa15.79■□□□□ 0.12
NXF1-201ENST00000294172 DHX36Q9H2U1 1008 aaKnown RBP15.79■□□□□ 0.12
NXF1-201ENST00000294172 PI4KBQ9UBF8 816 aa15.79■□□□□ 0.12
NXF1-201ENST00000294172 PAXBP1Q9Y5B6 917 aa15.79■□□□□ 0.12
NXF1-201ENST00000294172 A0A1B0GTH6 734 aa15.79■□□□□ 0.12
NXF1-201ENST00000294172 USP17L10C9JJH3 530 aa15.79■□□□□ 0.12
NXF1-201ENST00000294172 TXKP42681 527 aa15.79■□□□□ 0.12
NXF1-201ENST00000294172 ADKP55263 362 aaKnown RBP15.79■□□□□ 0.12
NXF1-201ENST00000294172 CERKLQ49MI3 558 aaPredicted RBP15.79■□□□□ 0.12
NXF1-201ENST00000294172 CCDC17Q96LX7 622 aa15.79■□□□□ 0.12
NXF1-201ENST00000294172 TEX33O43247 280 aa15.78■□□□□ 0.12
NXF1-201ENST00000294172 PPP1R11O60927 126 aaPredicted RBP15.78■□□□□ 0.12
NXF1-201ENST00000294172 PLCG1P19174 1290 aa15.78■□□□□ 0.12
NXF1-201ENST00000294172 PAK1Q13153 545 aa15.78■□□□□ 0.12
NXF1-201ENST00000294172 TBX2Q13207 712 aaPredicted RBP15.78■□□□□ 0.12
NXF1-201ENST00000294172 UBE2SQ16763 222 aa15.78■□□□□ 0.12
NXF1-201ENST00000294172 GPATCH4Q5T3I0 446 aaKnown RBP15.78■□□□□ 0.12
NXF1-201ENST00000294172 CDKAL1Q5VV42 579 aa15.78■□□□□ 0.12
NXF1-201ENST00000294172 SH3BP5LQ7L8J4 393 aa15.78■□□□□ 0.12
NXF1-201ENST00000294172 NELFBQ8WX92 580 aa15.78■□□□□ 0.12
NXF1-201ENST00000294172 AK8Q96MA6 479 aa15.78■□□□□ 0.12
NXF1-201ENST00000294172 MRIQ9BWK5 157 aa15.78■□□□□ 0.12
NXF1-201ENST00000294172 KCND1Q9NSA2 647 aa15.78■□□□□ 0.12
NXF1-201ENST00000294172 EEF2P13639 858 aaKnown RBP15.78■□□□□ 0.12
NXF1-201ENST00000294172 TNNI2P48788 182 aa15.78■□□□□ 0.12
NXF1-201ENST00000294172 FKBP1AP62942 108 aaKnown RBP15.78■□□□□ 0.12
NXF1-201ENST00000294172 LRRC15Q8TF66 581 aa15.78■□□□□ 0.12
NXF1-201ENST00000294172 TMX1Q9H3N1 280 aa15.78■□□□□ 0.12
NXF1-201ENST00000294172 TDRD3Q9H7E2 651 aaKnown RBP15.78■□□□□ 0.12
NXF1-201ENST00000294172 STK32BQ9NY57 414 aa15.78■□□□□ 0.12
NXF1-201ENST00000294172 RWDD2AQ9UIY3 292 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms