RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 RAD9BQ6WBX8 426 aa17.82■□□□□ 0.44
NCKIPSD-201ENST00000294129 LRRC15Q8TF66 581 aa17.82■□□□□ 0.44
NCKIPSD-201ENST00000294129 NUP88Q99567 741 aaPredicted RBP17.82■□□□□ 0.44
NCKIPSD-201ENST00000294129 MYH8P13535 1937 aa17.82■□□□□ 0.44
NCKIPSD-201ENST00000294129 KCNJ18B7U540 433 aa17.81■□□□□ 0.44
NCKIPSD-201ENST00000294129 PMS1P54277 932 aaKnown RBP17.81■□□□□ 0.44
NCKIPSD-201ENST00000294129 KCNJ12Q14500 433 aa17.81■□□□□ 0.44
NCKIPSD-201ENST00000294129 ARHGAP29Q52LW3 1261 aa17.81■□□□□ 0.44
NCKIPSD-201ENST00000294129 CTAGE1Q96RT6 745 aa17.81■□□□□ 0.44
NCKIPSD-201ENST00000294129 TCP11L1Q9NUJ3 509 aa17.81■□□□□ 0.44
NCKIPSD-201ENST00000294129 MORC2Q9Y6X9 1032 aaPredicted RBP17.81■□□□□ 0.44
NCKIPSD-201ENST00000294129 PHLPP2Q6ZVD8 1323 aa17.81■□□□□ 0.44
NCKIPSD-201ENST00000294129 GYPCP04921 128 aa17.81■□□□□ 0.44
NCKIPSD-201ENST00000294129 TXNRD1Q16881 649 aa17.81■□□□□ 0.44
NCKIPSD-201ENST00000294129 ZNF397Q8NF99 534 aaPredicted RBP17.81■□□□□ 0.44
NCKIPSD-201ENST00000294129 ZSWIM4Q9H7M6 989 aa17.81■□□□□ 0.44
NCKIPSD-201ENST00000294129 G3V3G9 751 aa17.8■□□□□ 0.44
NCKIPSD-201ENST00000294129 MPHOSPH10O00566 681 aaKnown RBP17.8■□□□□ 0.44
NCKIPSD-201ENST00000294129 BBOX1O75936 387 aa17.8■□□□□ 0.44
NCKIPSD-201ENST00000294129 AKR1B1P15121 316 aa17.8■□□□□ 0.44
NCKIPSD-201ENST00000294129 PLCG2P16885 1265 aa17.8■□□□□ 0.44
NCKIPSD-201ENST00000294129 PLCG1P19174 1290 aa17.8■□□□□ 0.44
NCKIPSD-201ENST00000294129 NONOQ15233 471 aaKnown RBP eCLIP17.8■□□□□ 0.44
NCKIPSD-201ENST00000294129 DCAF8Q5TAQ9 597 aa17.8■□□□□ 0.44
NCKIPSD-201ENST00000294129 TBCKQ8TEA7 893 aa17.8■□□□□ 0.44
NCKIPSD-201ENST00000294129 C6orf50Q9HD87 102 aa17.8■□□□□ 0.44
NCKIPSD-201ENST00000294129 RMND1Q9NWS8 449 aa17.8■□□□□ 0.44
NCKIPSD-201ENST00000294129 RWDD2AQ9UIY3 292 aa17.8■□□□□ 0.44
NCKIPSD-201ENST00000294129 TTF2Q9UNY4 1162 aaKnown RBP17.8■□□□□ 0.44
NCKIPSD-201ENST00000294129 PPEF1O14829 653 aaPredicted RBP17.8■□□□□ 0.44
NCKIPSD-201ENST00000294129 ADRA2BP18089 450 aa17.8■□□□□ 0.44
NCKIPSD-201ENST00000294129 TXKP42681 527 aa17.8■□□□□ 0.44
NCKIPSD-201ENST00000294129 COPB1P53618 953 aaKnown RBP17.8■□□□□ 0.44
NCKIPSD-201ENST00000294129 UBXN1Q04323 297 aa17.8■□□□□ 0.44
NCKIPSD-201ENST00000294129 CCDC93Q567U6 631 aa17.8■□□□□ 0.44
NCKIPSD-201ENST00000294129 CABP7Q86V35 215 aa17.8■□□□□ 0.44
NCKIPSD-201ENST00000294129 HPS3Q969F9 1004 aa17.8■□□□□ 0.44
NCKIPSD-201ENST00000294129 PYM1Q9BRP8 204 aaKnown RBP17.8■□□□□ 0.44
NCKIPSD-201ENST00000294129 ZNF219Q9P2Y4 722 aaPredicted RBP17.8■□□□□ 0.44
NCKIPSD-201ENST00000294129 RNF225M0QZC1 329 aaPredicted RBP17.79■□□□□ 0.44
NCKIPSD-201ENST00000294129 MFAP3LO75121 409 aa17.79■□□□□ 0.44
NCKIPSD-201ENST00000294129 UTP14CQ5TAP6 766 aaKnown RBP17.79■□□□□ 0.44
NCKIPSD-201ENST00000294129 ANKRD20A12PQ8NF67 263 aa17.79■□□□□ 0.44
NCKIPSD-201ENST00000294129 CERKQ8TCT0 537 aa17.79■□□□□ 0.44
NCKIPSD-201ENST00000294129 CCDC12Q8WUD4 166 aaPredicted RBP17.79■□□□□ 0.44
NCKIPSD-201ENST00000294129 UBXN4Q92575 508 aa17.79■□□□□ 0.44
NCKIPSD-201ENST00000294129 TRIM47Q96LD4 638 aa17.79■□□□□ 0.44
NCKIPSD-201ENST00000294129 DDX4Q9NQI0 724 aaKnown RBP17.79■□□□□ 0.44
NCKIPSD-201ENST00000294129 PARP3Q9Y6F1 533 aa17.79■□□□□ 0.44
NCKIPSD-201ENST00000294129 TPM1P09493 284 aa17.79■□□□□ 0.44
NCKIPSD-201ENST00000294129 CCDC175P0C221 793 aa17.79■□□□□ 0.44
NCKIPSD-201ENST00000294129 OR52Z1P0C646 297 aa17.79■□□□□ 0.44
NCKIPSD-201ENST00000294129 TCP11X2Q5H9J9 407 aa17.79■□□□□ 0.44
NCKIPSD-201ENST00000294129 TMED8Q6PL24 325 aaPredicted RBP17.79■□□□□ 0.44
NCKIPSD-201ENST00000294129 FCHSD1Q86WN1 690 aa17.79■□□□□ 0.44
NCKIPSD-201ENST00000294129 POTEDQ86YR6 584 aa17.79■□□□□ 0.44
NCKIPSD-201ENST00000294129 ACRBPQ8NEB7 543 aa17.79■□□□□ 0.44
NCKIPSD-201ENST00000294129 ZMYND12Q9H0C1 365 aa17.79■□□□□ 0.44
NCKIPSD-201ENST00000294129 LY75O60449 1722 aa17.79■□□□□ 0.44
NCKIPSD-201ENST00000294129 MYH1P12882 1939 aa17.79■□□□□ 0.44
NCKIPSD-201ENST00000294129 POLRMTO00411 1230 aaKnown RBP17.79■□□□□ 0.44
NCKIPSD-201ENST00000294129 SLF2Q8IX21 1173 aa17.79■□□□□ 0.44
NCKIPSD-201ENST00000294129 SPZ1Q9BXG8 430 aa17.79■□□□□ 0.44
NCKIPSD-201ENST00000294129 SPATA31A6Q5VVP1 1343 aa17.78■□□□□ 0.44
NCKIPSD-201ENST00000294129 THSD7AQ9UPZ6 1657 aa17.78■□□□□ 0.44
NCKIPSD-201ENST00000294129 SLC16A2P36021 539 aa17.78■□□□□ 0.44
NCKIPSD-201ENST00000294129 REXO1Q8N1G1 1221 aaKnown RBP17.78■□□□□ 0.44
NCKIPSD-201ENST00000294129 ZC3H12CQ9C0D7 883 aaKnown RBP17.78■□□□□ 0.44
NCKIPSD-201ENST00000294129 FAM196BA6NMK8 535 aa17.78■□□□□ 0.44
NCKIPSD-201ENST00000294129 GNA11P29992 359 aa17.78■□□□□ 0.44
NCKIPSD-201ENST00000294129 CACNB3P54284 484 aa17.78■□□□□ 0.44
NCKIPSD-201ENST00000294129 ASIC1P78348 528 aa17.78■□□□□ 0.44
NCKIPSD-201ENST00000294129 DDX60LQ5H9U9 1706 aaKnown RBP17.78■□□□□ 0.44
NCKIPSD-201ENST00000294129 C15orf52Q6ZUT6 534 aaKnown RBP17.78■□□□□ 0.44
NCKIPSD-201ENST00000294129 NEK8Q86SG6 692 aa17.78■□□□□ 0.44
NCKIPSD-201ENST00000294129 CERS5Q8N5B7 392 aa17.78■□□□□ 0.44
NCKIPSD-201ENST00000294129 TBC1D22AQ8WUA7 517 aa17.78■□□□□ 0.44
NCKIPSD-201ENST00000294129 PANX2Q96RD6 677 aa17.78■□□□□ 0.44
NCKIPSD-201ENST00000294129 CDK5RAP2Q96SN8 1893 aa17.78■□□□□ 0.44
NCKIPSD-201ENST00000294129 LZTS2Q9BRK4 669 aa17.78■□□□□ 0.44
NCKIPSD-201ENST00000294129 SRRTQ9BXP5 876 aaKnown RBP17.78■□□□□ 0.44
NCKIPSD-201ENST00000294129 PDHBP11177 359 aa17.77■□□□□ 0.44
NCKIPSD-201ENST00000294129 PBX1P40424 430 aa17.77■□□□□ 0.44
NCKIPSD-201ENST00000294129 KRT25Q7Z3Z0 450 aa17.77■□□□□ 0.44
NCKIPSD-201ENST00000294129 USP40Q9NVE5 1235 aa17.77■□□□□ 0.44
NCKIPSD-201ENST00000294129 TEX35Q5T0J7 233 aa17.77■□□□□ 0.44
NCKIPSD-201ENST00000294129 DAGLBQ8NCG7 672 aa17.77■□□□□ 0.44
NCKIPSD-201ENST00000294129 GJA10Q969M2 543 aa17.77■□□□□ 0.44
NCKIPSD-201ENST00000294129 QTRT2Q9H974 415 aaKnown RBP17.77■□□□□ 0.44
NCKIPSD-201ENST00000294129 TRPC5Q9UL62 973 aaPredicted RBP17.77■□□□□ 0.44
NCKIPSD-201ENST00000294129 ERCC3P19447 782 aa17.76■□□□□ 0.43
NCKIPSD-201ENST00000294129 HSPA1LP34931 641 aa17.76■□□□□ 0.43
NCKIPSD-201ENST00000294129 TNNI2P48788 182 aa17.76■□□□□ 0.43
NCKIPSD-201ENST00000294129 CCDC96Q2M329 555 aa17.76■□□□□ 0.43
NCKIPSD-201ENST00000294129 CT47A1Q5JQC4 288 aaPredicted RBP17.76■□□□□ 0.43
NCKIPSD-201ENST00000294129 GALNT17Q6IS24 598 aa17.76■□□□□ 0.43
NCKIPSD-201ENST00000294129 ABL1P00519 1130 aa17.76■□□□□ 0.43
NCKIPSD-201ENST00000294129 KRT9P35527 623 aa17.76■□□□□ 0.43
NCKIPSD-201ENST00000294129 PDE4DQ08499 809 aa17.76■□□□□ 0.43
NCKIPSD-201ENST00000294129 TCP10Q12799 353 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms