RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 ENGASEQ8NFI3 743 aa13.41□□□□□ -0.26
SSRP1-201ENST00000278412 ZMYND12Q9H0C1 365 aa13.41□□□□□ -0.26
SSRP1-201ENST00000278412 FBXO2Q9UK22 296 aaPredicted RBP13.41□□□□□ -0.26
SSRP1-201ENST00000278412 PNMA6FA0A0J9YX94 578 aa13.41□□□□□ -0.26
SSRP1-201ENST00000278412 OPLAHO14841 1288 aa13.41□□□□□ -0.26
SSRP1-201ENST00000278412 FOXN1O15353 648 aa13.41□□□□□ -0.26
SSRP1-201ENST00000278412 PFKFB1P16118 471 aa13.41□□□□□ -0.26
SSRP1-201ENST00000278412 LMOD1P29536 600 aaPredicted RBP13.41□□□□□ -0.26
SSRP1-201ENST00000278412 PTGDRQ13258 359 aa13.41□□□□□ -0.26
SSRP1-201ENST00000278412 TTC38Q5R3I4 469 aa13.41□□□□□ -0.26
SSRP1-201ENST00000278412 GPATCH4Q5T3I0 446 aaKnown RBP13.41□□□□□ -0.26
SSRP1-201ENST00000278412 MTMR8Q96EF0 704 aa13.41□□□□□ -0.26
SSRP1-201ENST00000278412 EPSTI1Q96J88 318 aa13.41□□□□□ -0.26
SSRP1-201ENST00000278412 CLMNQ96JQ2 1002 aa13.41□□□□□ -0.26
SSRP1-201ENST00000278412 LZTS2Q9BRK4 669 aa13.41□□□□□ -0.26
SSRP1-201ENST00000278412 ARHGEF10LQ9HCE6 1279 aa13.41□□□□□ -0.26
SSRP1-201ENST00000278412 ADARB2Q9NS39 739 aaKnown RBP13.41□□□□□ -0.26
SSRP1-201ENST00000278412 A0A087X0B3 334 aa13.4□□□□□ -0.26
SSRP1-201ENST00000278412 ASNSP08243 561 aa13.4□□□□□ -0.26
SSRP1-201ENST00000278412 XRCC6P12956 609 aaKnown RBP eCLIP13.4□□□□□ -0.26
SSRP1-201ENST00000278412 PTMSP20962 102 aa13.4□□□□□ -0.26
SSRP1-201ENST00000278412 HOXA13P31271 388 aaPredicted RBP13.4□□□□□ -0.26
SSRP1-201ENST00000278412 NT5C2P49902 561 aa13.4□□□□□ -0.26
SSRP1-201ENST00000278412 SYDE2Q5VT97 1194 aa13.4□□□□□ -0.26
SSRP1-201ENST00000278412 PDILTQ8N807 584 aa13.4□□□□□ -0.26
SSRP1-201ENST00000278412 DCAF4Q8WV16 495 aa13.4□□□□□ -0.26
SSRP1-201ENST00000278412 GMCL1Q96IK5 515 aa13.4□□□□□ -0.26
SSRP1-201ENST00000278412 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.4□□□□□ -0.26
SSRP1-201ENST00000278412 PCDHA1Q9Y5I3 950 aa13.4□□□□□ -0.26
SSRP1-201ENST00000278412 PP2D1A8MPX8 630 aa13.4□□□□□ -0.26
SSRP1-201ENST00000278412 TRAF5O00463 557 aa13.4□□□□□ -0.26
SSRP1-201ENST00000278412 RILPL1Q5EBL4 403 aa13.4□□□□□ -0.26
SSRP1-201ENST00000278412 CCDC183Q5T5S1 534 aa13.4□□□□□ -0.26
SSRP1-201ENST00000278412 ADALQ6DHV7 355 aa13.4□□□□□ -0.26
SSRP1-201ENST00000278412 KRT26Q7Z3Y9 468 aa13.4□□□□□ -0.26
SSRP1-201ENST00000278412 ZNF526Q8TF50 670 aaPredicted RBP13.4□□□□□ -0.26
SSRP1-201ENST00000278412 CSRNP2Q9H175 543 aa13.4□□□□□ -0.26
SSRP1-201ENST00000278412 VCPKMTQ9H867 229 aa13.4□□□□□ -0.26
SSRP1-201ENST00000278412 ZHX2Q9Y6X8 837 aa13.4□□□□□ -0.26
SSRP1-201ENST00000278412 BRCA2P51587 3418 aa13.4□□□□□ -0.26
SSRP1-201ENST00000278412 EPHX2P34913 555 aa13.4□□□□□ -0.27
SSRP1-201ENST00000278412 CSPP1Q1MSJ5 1256 aa13.4□□□□□ -0.27
SSRP1-201ENST00000278412 SLC30A10Q6XR72 485 aa13.4□□□□□ -0.27
SSRP1-201ENST00000278412 GRAMD1CQ8IYS0 662 aa13.4□□□□□ -0.27
SSRP1-201ENST00000278412 FMR1NBQ8N0W7 255 aaPredicted RBP13.4□□□□□ -0.27
SSRP1-201ENST00000278412 KCNG4Q8TDN1 519 aa13.4□□□□□ -0.27
SSRP1-201ENST00000278412 EMILIN3Q9NT22 766 aa13.4□□□□□ -0.27
SSRP1-201ENST00000278412 USP2O75604 605 aaPredicted RBP13.39□□□□□ -0.27
SSRP1-201ENST00000278412 ZNF445P59923 1031 aa13.39□□□□□ -0.27
SSRP1-201ENST00000278412 LETM2Q2VYF4 491 aa13.39□□□□□ -0.27
SSRP1-201ENST00000278412 APOBEC3FQ8IUX4 373 aaKnown RBP13.39□□□□□ -0.27
SSRP1-201ENST00000278412 MRPS27Q92552 414 aaKnown RBP13.39□□□□□ -0.27
SSRP1-201ENST00000278412 KLRG1Q96E93 195 aa13.39□□□□□ -0.27
SSRP1-201ENST00000278412 CCDC194A0A1B0GVG4 234 aa13.39□□□□□ -0.27
SSRP1-201ENST00000278412 VWA3AA6NCI4 1184 aa13.39□□□□□ -0.27
SSRP1-201ENST00000278412 TDP2O95551 362 aa13.39□□□□□ -0.27
SSRP1-201ENST00000278412 PTPRAP18433 802 aa13.39□□□□□ -0.27
SSRP1-201ENST00000278412 HMGCS2P54868 508 aa13.39□□□□□ -0.27
SSRP1-201ENST00000278412 ISM2Q6H9L7 571 aa13.39□□□□□ -0.27
SSRP1-201ENST00000278412 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.39□□□□□ -0.27
SSRP1-201ENST00000278412 TBCKQ8TEA7 893 aa13.39□□□□□ -0.27
SSRP1-201ENST00000278412 BRMS1Q9HCU9 246 aa13.39□□□□□ -0.27
SSRP1-201ENST00000278412 SH3GLB2Q9NR46 395 aa13.39□□□□□ -0.27
SSRP1-201ENST00000278412 MYH7BA7E2Y1 1941 aa13.39□□□□□ -0.27
SSRP1-201ENST00000278412 GOLGA6L3A6NEY3 463 aa13.38□□□□□ -0.27
SSRP1-201ENST00000278412 CASP1P29466 404 aa13.38□□□□□ -0.27
SSRP1-201ENST00000278412 STAT2P52630 851 aa13.38□□□□□ -0.27
SSRP1-201ENST00000278412 MAP1SQ66K74 1059 aaPredicted RBP13.38□□□□□ -0.27
SSRP1-201ENST00000278412 AGBL1Q96MI9 1066 aa13.38□□□□□ -0.27
SSRP1-201ENST00000278412 NUP62CLQ9H1M0 184 aa13.38□□□□□ -0.27
SSRP1-201ENST00000278412 CTNND1O60716 968 aaKnown RBP13.38□□□□□ -0.27
SSRP1-201ENST00000278412 ADCY7P51828 1080 aa13.38□□□□□ -0.27
SSRP1-201ENST00000278412 VGLL4Q14135 290 aa13.38□□□□□ -0.27
SSRP1-201ENST00000278412 REXO1Q8N1G1 1221 aaKnown RBP13.38□□□□□ -0.27
SSRP1-201ENST00000278412 GLTPD2A6NH11 291 aa13.37□□□□□ -0.27
SSRP1-201ENST00000278412 SLC37A4O43826 429 aa13.37□□□□□ -0.27
SSRP1-201ENST00000278412 VCAM1P19320 739 aa13.37□□□□□ -0.27
SSRP1-201ENST00000278412 CALML3P27482 149 aa13.37□□□□□ -0.27
SSRP1-201ENST00000278412 UBXN2AP68543 259 aa13.37□□□□□ -0.27
SSRP1-201ENST00000278412 ATL3Q6DD88 541 aa13.37□□□□□ -0.27
SSRP1-201ENST00000278412 LRSAM1Q6UWE0 723 aa13.37□□□□□ -0.27
SSRP1-201ENST00000278412 CPXCR1Q8N123 301 aa13.37□□□□□ -0.27
SSRP1-201ENST00000278412 C4orf32Q8N8J7 132 aa13.37□□□□□ -0.27
SSRP1-201ENST00000278412 CCDC148Q8NFR7 591 aa13.37□□□□□ -0.27
SSRP1-201ENST00000278412 TANGO6Q9C0B7 1094 aa13.37□□□□□ -0.27
SSRP1-201ENST00000278412 TNMDQ9H2S6 317 aa13.37□□□□□ -0.27
SSRP1-201ENST00000278412 CLSTN2Q9H4D0 955 aa13.37□□□□□ -0.27
SSRP1-201ENST00000278412 GOPCQ9HD26 462 aa13.37□□□□□ -0.27
SSRP1-201ENST00000278412 HOMER2Q9NSB8 354 aa13.37□□□□□ -0.27
SSRP1-201ENST00000278412 PTPREP23469 700 aa13.37□□□□□ -0.27
SSRP1-201ENST00000278412 SMARCA1P28370 1054 aa13.37□□□□□ -0.27
SSRP1-201ENST00000278412 FAM160A1Q05DH4 1040 aa13.37□□□□□ -0.27
SSRP1-201ENST00000278412 LONRF3Q496Y0 759 aa13.37□□□□□ -0.27
SSRP1-201ENST00000278412 DPY19L2Q6NUT2 758 aa13.37□□□□□ -0.27
SSRP1-201ENST00000278412 SULF1Q8IWU6 871 aa13.37□□□□□ -0.27
SSRP1-201ENST00000278412 SCYL3Q8IZE3 742 aa13.37□□□□□ -0.27
SSRP1-201ENST00000278412 KRI1Q8N9T8 703 aaKnown RBP13.37□□□□□ -0.27
SSRP1-201ENST00000278412 STAMQ92783 540 aa13.37□□□□□ -0.27
SSRP1-201ENST00000278412 DCPSQ96C86 337 aaKnown RBP13.37□□□□□ -0.27
SSRP1-201ENST00000278412 PURBQ96QR8 312 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms