RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 C3orf67Q6ZVT6 689 aa8.52□□□□□ -1.05
TRIM6-201ENST00000278302 ENAHQ8N8S7 591 aaPredicted RBP8.52□□□□□ -1.05
TRIM6-201ENST00000278302 TBC1D22AQ8WUA7 517 aa8.52□□□□□ -1.05
TRIM6-201ENST00000278302 SELENOOQ9BVL4 669 aa8.52□□□□□ -1.05
TRIM6-201ENST00000278302 CSRNP2Q9H175 543 aa8.52□□□□□ -1.05
TRIM6-201ENST00000278302 VIPAS39Q9H9C1 493 aa8.52□□□□□ -1.05
TRIM6-201ENST00000278302 ANAPC4Q9UJX5 808 aa8.52□□□□□ -1.05
TRIM6-201ENST00000278302 MYO6Q9UM54 1294 aa8.52□□□□□ -1.05
TRIM6-201ENST00000278302 DOCK2Q92608 1830 aa8.51□□□□□ -1.05
TRIM6-201ENST00000278302 AKR1B15C9JRZ8 316 aaPredicted RBP8.51□□□□□ -1.05
TRIM6-201ENST00000278302 MDM2Q00987 491 aaPredicted RBP8.51□□□□□ -1.05
TRIM6-201ENST00000278302 PPFIA1Q13136 1202 aa8.51□□□□□ -1.05
TRIM6-201ENST00000278302 ZNF579Q8NAF0 562 aaKnown RBP8.51□□□□□ -1.05
TRIM6-201ENST00000278302 MLKLQ8NB16 471 aa8.51□□□□□ -1.05
TRIM6-201ENST00000278302 FAM84BQ96KN1 310 aaPredicted RBP8.51□□□□□ -1.05
TRIM6-201ENST00000278302 RIOK1Q9BRS2 568 aaKnown RBP8.51□□□□□ -1.05
TRIM6-201ENST00000278302 DDX20Q9UHI6 824 aaKnown RBP8.51□□□□□ -1.05
TRIM6-201ENST00000278302 USP17L12C9JPN9 530 aa8.51□□□□□ -1.05
TRIM6-201ENST00000278302 USP17L21D6R901 530 aa8.51□□□□□ -1.05
TRIM6-201ENST00000278302 MEFVO15553 781 aaPredicted RBP8.51□□□□□ -1.05
TRIM6-201ENST00000278302 MYO1BO43795 1136 aa8.51□□□□□ -1.05
TRIM6-201ENST00000278302 PPP1R12BO60237 982 aaPredicted RBP8.51□□□□□ -1.05
TRIM6-201ENST00000278302 NAA25Q14CX7 972 aa8.51□□□□□ -1.05
TRIM6-201ENST00000278302 SF3B3Q15393 1217 aaKnown RBP8.51□□□□□ -1.05
TRIM6-201ENST00000278302 ELOA2Q8IYF1 753 aaPredicted RBP8.51□□□□□ -1.05
TRIM6-201ENST00000278302 CELF1Q92879 486 aaKnown RBP8.51□□□□□ -1.05
TRIM6-201ENST00000278302 RRP36Q96EU6 259 aaKnown RBP8.51□□□□□ -1.05
TRIM6-201ENST00000278302 SCLT1Q96NL6 688 aa8.51□□□□□ -1.05
TRIM6-201ENST00000278302 MMS19Q96T76 1030 aa8.51□□□□□ -1.05
TRIM6-201ENST00000278302 RBM28Q9NW13 759 aaKnown RBP8.51□□□□□ -1.05
TRIM6-201ENST00000278302 TFR2Q9UP52 801 aa8.51□□□□□ -1.05
TRIM6-201ENST00000278302 ZNF804BA4D1E1 1349 aa8.51□□□□□ -1.05
TRIM6-201ENST00000278302 ECM29Q5VYK3 1845 aa8.5□□□□□ -1.05
TRIM6-201ENST00000278302 FAM205CA6NFA0 338 aa8.5□□□□□ -1.05
TRIM6-201ENST00000278302 PRPF3O43395 683 aaKnown RBP8.5□□□□□ -1.05
TRIM6-201ENST00000278302 PLEKHA8P1O95397 391 aa8.5□□□□□ -1.05
TRIM6-201ENST00000278302 CALM1P0DP23 149 aa8.5□□□□□ -1.05
TRIM6-201ENST00000278302 CALM2P0DP24 149 aa8.5□□□□□ -1.05
TRIM6-201ENST00000278302 CALM3P0DP25 149 aa8.5□□□□□ -1.05
TRIM6-201ENST00000278302 AFMP43652 599 aa8.5□□□□□ -1.05
TRIM6-201ENST00000278302 USP14P54578 494 aa8.5□□□□□ -1.05
TRIM6-201ENST00000278302 WHAMMP3Q1A5X7 153 aa8.5□□□□□ -1.05
TRIM6-201ENST00000278302 KCTD16Q68DU8 428 aa8.5□□□□□ -1.05
TRIM6-201ENST00000278302 USP49Q70CQ1 688 aa8.5□□□□□ -1.05
TRIM6-201ENST00000278302 SMIM5Q71RC9 77 aa8.5□□□□□ -1.05
TRIM6-201ENST00000278302 SH2D3CQ8N5H7 860 aa8.5□□□□□ -1.05
TRIM6-201ENST00000278302 BRIP1Q9BX63 1249 aa8.5□□□□□ -1.05
TRIM6-201ENST00000278302 TFCP2L1Q9NZI6 479 aa8.5□□□□□ -1.05
TRIM6-201ENST00000278302 MYH8P13535 1937 aa8.5□□□□□ -1.05
TRIM6-201ENST00000278302 FSBPO95073 299 aa8.5□□□□□ -1.05
TRIM6-201ENST00000278302 ZNF174Q15697 407 aa8.5□□□□□ -1.05
TRIM6-201ENST00000278302 NBPF20Q3BBV1 942 aa8.5□□□□□ -1.05
TRIM6-201ENST00000278302 AMOTL1Q8IY63 956 aa8.5□□□□□ -1.05
TRIM6-201ENST00000278302 NLRP3Q96P20 1036 aa8.5□□□□□ -1.05
TRIM6-201ENST00000278302 AATFQ9NY61 560 aaKnown RBP eCLIP8.5□□□□□ -1.05
TRIM6-201ENST00000278302 TIAM2Q8IVF5 1701 aa8.5□□□□□ -1.05
TRIM6-201ENST00000278302 RPS8P62241 208 aaKnown RBP8.5□□□□□ -1.05
TRIM6-201ENST00000278302 PKN1Q16512 942 aa8.5□□□□□ -1.05
TRIM6-201ENST00000278302 C11orf91Q3C1V1 193 aa8.5□□□□□ -1.05
TRIM6-201ENST00000278302 CCDC40Q4G0X9 1142 aa8.5□□□□□ -1.05
TRIM6-201ENST00000278302 FAM47AQ5JRC9 791 aa8.5□□□□□ -1.05
TRIM6-201ENST00000278302 CRNKL1Q9BZJ0 848 aaKnown RBP8.5□□□□□ -1.05
TRIM6-201ENST00000278302 DNAJC5Q9H3Z4 198 aa8.5□□□□□ -1.05
TRIM6-201ENST00000278302 GUCA1BQ9UMX6 200 aa8.5□□□□□ -1.05
TRIM6-201ENST00000278302 HIBADHP31937 336 aaKnown RBP8.49□□□□□ -1.05
TRIM6-201ENST00000278302 CASP14P31944 242 aa8.49□□□□□ -1.05
TRIM6-201ENST00000278302 SF3B2Q13435 895 aaKnown RBP8.49□□□□□ -1.05
TRIM6-201ENST00000278302 MORC3Q14149 939 aa8.49□□□□□ -1.05
TRIM6-201ENST00000278302 KLHL10Q6JEL2 608 aa8.49□□□□□ -1.05
TRIM6-201ENST00000278302 FMNL3Q8IVF7 1028 aa8.49□□□□□ -1.05
TRIM6-201ENST00000278302 CCDC13Q8IYE1 715 aa8.49□□□□□ -1.05
TRIM6-201ENST00000278302 CCDC24Q8N4L8 307 aa8.49□□□□□ -1.05
TRIM6-201ENST00000278302 TRIML1Q8N9V2 468 aa8.49□□□□□ -1.05
TRIM6-201ENST00000278302 LINC00116Q8NCU8 138 aa8.49□□□□□ -1.05
TRIM6-201ENST00000278302 ARL8AQ96BM9 186 aa8.49□□□□□ -1.05
TRIM6-201ENST00000278302 EPSTI1Q96J88 318 aa8.49□□□□□ -1.05
TRIM6-201ENST00000278302 SLF1Q9BQI6 1058 aa8.49□□□□□ -1.05
TRIM6-201ENST00000278302 PHF20Q9BVI0 1012 aa8.49□□□□□ -1.05
TRIM6-201ENST00000278302 PLCH1Q4KWH8 1693 aa8.49□□□□□ -1.05
TRIM6-201ENST00000278302 ACTN4O43707 911 aaKnown RBP8.49□□□□□ -1.05
TRIM6-201ENST00000278302 GCKP35557 465 aa8.49□□□□□ -1.05
TRIM6-201ENST00000278302 NLRP5P59047 1200 aa8.49□□□□□ -1.05
TRIM6-201ENST00000278302 MECOMQ03112 1051 aa8.49□□□□□ -1.05
TRIM6-201ENST00000278302 IFT88Q13099 833 aa8.49□□□□□ -1.05
TRIM6-201ENST00000278302 SLC4A8Q2Y0W8 1093 aa8.49□□□□□ -1.05
TRIM6-201ENST00000278302 EARS2Q5JPH6 523 aaKnown RBP8.49□□□□□ -1.05
TRIM6-201ENST00000278302 TBC1D9BQ66K14 1250 aa8.49□□□□□ -1.05
TRIM6-201ENST00000278302 SND1Q7KZF4 910 aaKnown RBP eCLIP8.49□□□□□ -1.05
TRIM6-201ENST00000278302 PPFIBP1Q86W92 1011 aa8.49□□□□□ -1.05
TRIM6-201ENST00000278302 NBPF5PQ86XG9 351 aaPredicted RBP8.49□□□□□ -1.05
TRIM6-201ENST00000278302 ENOX1Q8TC92 643 aaKnown RBP8.49□□□□□ -1.05
TRIM6-201ENST00000278302 SETDB2Q96T68 719 aa8.49□□□□□ -1.05
TRIM6-201ENST00000278302 TACO1Q9BSH4 297 aaKnown RBP8.49□□□□□ -1.05
TRIM6-201ENST00000278302 KIF9Q9HAQ2 790 aa8.49□□□□□ -1.05
TRIM6-201ENST00000278302 SLC40A1Q9NP59 571 aa8.49□□□□□ -1.05
TRIM6-201ENST00000278302 JAG2Q9Y219 1238 aa8.49□□□□□ -1.05
TRIM6-201ENST00000278302 PHLPP1O60346 1717 aa8.49□□□□□ -1.05
TRIM6-201ENST00000278302 BCORQ6W2J9 1755 aa8.49□□□□□ -1.05
TRIM6-201ENST00000278302 TSPY2A6NKD2 308 aa8.48□□□□□ -1.05
TRIM6-201ENST00000278302 BMP15O95972 392 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms