RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 DAAM1Q9Y4D1 1078 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 CD2APQ9Y5K6 639 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 ZBED4O75132 1171 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 COPB1P53618 953 aaKnown RBP9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 N4BP2L2Q92802 583 aaPredicted RBP9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 NGLY1Q96IV0 654 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 DBNDD2Q9BQY9 259 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 NUB1Q9Y5A7 615 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 SOS2Q07890 1332 aaPredicted RBP9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 EEF1GP26641 437 aaKnown RBP9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 PDE1BQ01064 536 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 SLFN12Q8IYM2 578 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 SEPT8Q92599 483 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 PPWD1Q96BP3 646 aaKnown RBP9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 PBKQ96KB5 322 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 FAM81BQ96LP2 452 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 YY1AP1Q9H869 796 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 NSFL1CQ9UNZ2 370 aaKnown RBP9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 ADGRL1O94910 1474 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 ADAMTS2O95450 1211 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 SRGAP2BP0DMP2 458 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 NLRX1Q86UT6 975 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 MRC2Q9UBG0 1479 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 TOP2BQ02880 1626 aa9.5□□□□□ -0.89
SCUBE3-201ENST00000274938 HEXIM1O94992 359 aaKnown RBP9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 POLR2FP61218 127 aaKnown RBP9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 LRMPQ12912 555 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 CADPS2Q86UW7 1296 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 SLC17A8Q8NDX2 589 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 STK17AQ9UEE5 414 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 KCNJ14Q9UNX9 436 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 PGRMC1O00264 195 aaKnown RBP9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 TNNC2P02585 160 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 LONP1P36776 959 aaKnown RBP9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 NSFP46459 744 aaKnown RBP9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 RCN2Q14257 317 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 FAM227BQ96M60 508 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 PLEKHA4Q9H4M7 779 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 E7EWF7 191 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 SLC1A4P43007 532 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 DEPTORQ8TB45 409 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 JAK2O60674 1132 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 CTNND1O60716 968 aaKnown RBP9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 ECE1P42892 770 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 MAGEA9P43362 315 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 KCTD16Q68DU8 428 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 CEP19Q96LK0 163 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 JPH2Q9BR39 696 aaPredicted RBP9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 SAP30BPQ9UHR5 308 aaKnown RBP9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 ATP5HO75947 161 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 SLC35F6Q8N357 371 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 ARHGAP18Q8N392 663 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 JDP2Q8WYK2 163 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 PHKBQ93100 1093 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 GSDMAQ96QA5 445 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 FANCLQ9NW38 375 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 ARPP21Q9UBL0 812 aaPredicted RBP9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 TTLL3Q9Y4R7 772 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 COL4A3BPQ9Y5P4 624 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 ECEL1O95672 775 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 RPN1P04843 607 aaKnown RBP9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 MSH2P43246 934 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 NNTQ13423 1086 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 NBPF10Q6P3W6 841 aaKnown RBP9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 LPIN2Q92539 896 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 MTMR6Q9Y217 621 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 ANGPTL3Q9Y5C1 460 aa9.49□□□□□ -0.89
SCUBE3-201ENST00000274938 ESYT2A0FGR8 921 aa9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 IFNAR2P48551 515 aa9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 OCA2Q04671 838 aa9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 C10orf76Q5T2E6 689 aa9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 HESX1Q9UBX0 185 aa9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 PNMA2Q9UL42 364 aa9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 ZNF449Q6P9G9 518 aa9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 BLIDQ8IZY5 108 aa9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 SAAL1Q96ER3 474 aa9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 FAM96AQ9H5X1 160 aa9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 RGS12O14924 1447 aa9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 CHUKO15111 745 aa9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 RNMTO43148 476 aaKnown RBP9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 ITGA6P23229 1130 aa9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 YARSP54577 528 aaKnown RBP9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 EHHADHQ08426 723 aa9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 TRIML2Q8N7C3 387 aa9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 ZMYM6O95789 1325 aa9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 PDE8AO60658 829 aa9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 NR1I2O75469 434 aa9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 OR52Z1P0C646 297 aa9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 MYCLP12524 364 aaPredicted RBP9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 VPS41P49754 854 aa9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 MFAP3P55082 362 aa9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 SNX1Q13596 522 aa9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 ME3Q16798 604 aa9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 KMT5BQ4FZB7 885 aa9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 ATG16L1Q676U5 607 aa9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 ZBTB8OSQ8IWT0 167 aa9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 OTUD7AQ8TE49 926 aaPredicted RBP9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 MAGOHBQ96A72 148 aaKnown RBP9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 USP28Q96RU2 1077 aa9.48□□□□□ -0.89
SCUBE3-201ENST00000274938 PICK1Q9NRD5 415 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms