RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 SLC12A4Q9UP95 1085 aa10.22□□□□□ -0.77
PDGFC-201ENST00000274071 MFAP3LO75121 409 aa10.21□□□□□ -0.77
PDGFC-201ENST00000274071 ATP2A2P16615 1042 aaKnown RBP10.21□□□□□ -0.77
PDGFC-201ENST00000274071 DESP17661 470 aa10.21□□□□□ -0.77
PDGFC-201ENST00000274071 FMR1Q06787 632 aaKnown RBP eCLIP10.21□□□□□ -0.77
PDGFC-201ENST00000274071 HSP90AB4PQ58FF6 505 aa10.21□□□□□ -0.77
PDGFC-201ENST00000274071 G2E3Q7L622 706 aa10.21□□□□□ -0.77
PDGFC-201ENST00000274071 CAGE1Q8TC20 777 aa10.21□□□□□ -0.77
PDGFC-201ENST00000274071 SLF1Q9BQI6 1058 aa10.21□□□□□ -0.77
PDGFC-201ENST00000274071 NUB1Q9Y5A7 615 aa10.21□□□□□ -0.77
PDGFC-201ENST00000274071 A0A1B0GTH6 734 aa10.21□□□□□ -0.78
PDGFC-201ENST00000274071 SPTLC2O15270 562 aa10.21□□□□□ -0.78
PDGFC-201ENST00000274071 E2F6O75461 281 aa10.21□□□□□ -0.78
PDGFC-201ENST00000274071 CMA1P23946 247 aa10.21□□□□□ -0.78
PDGFC-201ENST00000274071 PSMC4P43686 418 aa10.21□□□□□ -0.78
PDGFC-201ENST00000274071 BPIFB4P59827 614 aa10.21□□□□□ -0.78
PDGFC-201ENST00000274071 CFAP58Q5T655 872 aa10.21□□□□□ -0.78
PDGFC-201ENST00000274071 CCDC102BQ68D86 513 aa10.21□□□□□ -0.78
PDGFC-201ENST00000274071 CCDC70Q6NSX1 233 aa10.21□□□□□ -0.78
PDGFC-201ENST00000274071 NSUN7Q8NE18 718 aaKnown RBP10.21□□□□□ -0.78
PDGFC-201ENST00000274071 KCNG4Q8TDN1 519 aa10.21□□□□□ -0.78
PDGFC-201ENST00000274071 CCDC43Q96MW1 224 aaKnown RBP10.21□□□□□ -0.78
PDGFC-201ENST00000274071 SAMSN1Q9NSI8 373 aaKnown RBP10.21□□□□□ -0.78
PDGFC-201ENST00000274071 TMEM98Q9Y2Y6 226 aa10.21□□□□□ -0.78
PDGFC-201ENST00000274071 CFAP73A6NFT4 308 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 CTDNEP1O95476 244 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 PENKP01210 267 aaPredicted RBP10.2□□□□□ -0.78
PDGFC-201ENST00000274071 PDHA1P08559 390 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 VIL1P09327 827 aaKnown RBP10.2□□□□□ -0.78
PDGFC-201ENST00000274071 FXR1P51114 621 aaKnown RBP eCLIP10.2□□□□□ -0.78
PDGFC-201ENST00000274071 ESCO1Q5FWF5 840 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 LCA5Q86VQ0 697 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 MLKLQ8NB16 471 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 RHPN1Q8TCX5 695 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 KIFAP3Q92845 792 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 RPS6KC1Q96S38 1066 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 INCENPQ9NQS7 918 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 SLC12A6Q9UHW9 1150 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 PHF20L1A8MW92 1017 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 HMGB1P1B2RPK0 211 aaPredicted RBP10.2□□□□□ -0.78
PDGFC-201ENST00000274071 FUT4P22083 530 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 FECHP22830 423 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 TMOD1P28289 359 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 KCNJ2P63252 427 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 MCM10Q7L590 875 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 TMTC1Q8IUR5 882 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 CD302Q8IX05 232 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 CCDC155Q8N6L0 562 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 DYDC1Q8WWB3 177 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 EYA1Q99502 592 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 WWC3Q9ULE0 1092 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 CEP131Q9UPN4 1083 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 LRRC42Q9Y546 428 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 ARHGEF10O15013 1369 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 RGPD1P0DJD0 1748 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 SURF6O75683 361 aaKnown RBP10.2□□□□□ -0.78
PDGFC-201ENST00000274071 GSTA1P08263 222 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 SP100P23497 879 aaPredicted RBP10.2□□□□□ -0.78
PDGFC-201ENST00000274071 RFC5P40937 340 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 SYKP43405 635 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 CUL4BQ13620 913 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 MYBPC2Q14324 1141 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 KBTBD12Q3ZCT8 623 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 TMEM154Q6P9G4 183 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 TRMT44Q8IYL2 757 aaKnown RBP10.2□□□□□ -0.78
PDGFC-201ENST00000274071 MMGT1Q8N4V1 131 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 SMYD1Q8NB12 490 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 C1orf131Q8NDD1 294 aaKnown RBP10.2□□□□□ -0.78
PDGFC-201ENST00000274071 KCNV2Q8TDN2 545 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 FAM227BQ96M60 508 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 FGD4Q96M96 766 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 CORO1BQ9BR76 489 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 PCDHA5Q9Y5H7 936 aa10.2□□□□□ -0.78
PDGFC-201ENST00000274071 F8W031 263 aaPredicted RBP10.19□□□□□ -0.78
PDGFC-201ENST00000274071 ALDH5A1P51649 535 aaPredicted RBP10.19□□□□□ -0.78
PDGFC-201ENST00000274071 CDC37Q16543 378 aaPredicted RBP10.19□□□□□ -0.78
PDGFC-201ENST00000274071 INF2Q27J81 1249 aa10.19□□□□□ -0.78
PDGFC-201ENST00000274071 FOXB2Q5VYV0 432 aa10.19□□□□□ -0.78
PDGFC-201ENST00000274071 CPLX4Q7Z7G2 160 aa10.19□□□□□ -0.78
PDGFC-201ENST00000274071 LINS1Q8NG48 757 aa10.19□□□□□ -0.78
PDGFC-201ENST00000274071 IFT43Q96FT9 208 aa10.19□□□□□ -0.78
PDGFC-201ENST00000274071 MED15Q96RN5 788 aa10.19□□□□□ -0.78
PDGFC-201ENST00000274071 LLPHQ9BRT6 129 aaKnown RBP10.19□□□□□ -0.78
PDGFC-201ENST00000274071 MOV10L1Q9BXT6 1211 aaKnown RBP10.19□□□□□ -0.78
PDGFC-201ENST00000274071 DMAP1Q9NPF5 467 aaPredicted RBP10.19□□□□□ -0.78
PDGFC-201ENST00000274071 TUBGCP4Q9UGJ1 667 aa10.19□□□□□ -0.78
PDGFC-201ENST00000274071 REXO2Q9Y3B8 237 aaKnown RBP10.19□□□□□ -0.78
PDGFC-201ENST00000274071 MYH15Q9Y2K3 1946 aa10.19□□□□□ -0.78
PDGFC-201ENST00000274071 PTPDC1A2A3K4 754 aa10.19□□□□□ -0.78
PDGFC-201ENST00000274071 PALM3A6NDB9 673 aaPredicted RBP10.19□□□□□ -0.78
PDGFC-201ENST00000274071 A8MUI8 341 aa10.19□□□□□ -0.78
PDGFC-201ENST00000274071 SMAPO00193 183 aa10.19□□□□□ -0.78
PDGFC-201ENST00000274071 GYPCP04921 128 aa10.19□□□□□ -0.78
PDGFC-201ENST00000274071 POLR3DP05423 398 aaPredicted RBP10.19□□□□□ -0.78
PDGFC-201ENST00000274071 HOXC9P31274 260 aa10.19□□□□□ -0.78
PDGFC-201ENST00000274071 PAK2Q13177 524 aa10.19□□□□□ -0.78
PDGFC-201ENST00000274071 OR52E8Q6IFG1 317 aa10.19□□□□□ -0.78
PDGFC-201ENST00000274071 APTXQ7Z2E3 356 aaKnown RBP10.19□□□□□ -0.78
PDGFC-201ENST00000274071 TMEM110Q86TL2 294 aa10.19□□□□□ -0.78
PDGFC-201ENST00000274071 NUTM2AQ8IVF1 878 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms