RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 CCDC178Q5BJE1 867 aa14.43□□□□□ -0.1
COL8A1-202ENST00000273342 CCDC181Q5TID7 509 aa14.43□□□□□ -0.1
COL8A1-202ENST00000273342 GIGYF2Q6Y7W6 1299 aaKnown RBP14.43□□□□□ -0.1
COL8A1-202ENST00000273342 MSL3Q8N5Y2 521 aaKnown RBP14.43□□□□□ -0.1
COL8A1-202ENST00000273342 MS4A14Q96JA4 679 aa14.43□□□□□ -0.1
COL8A1-202ENST00000273342 CCDC42Q96M95 316 aa14.43□□□□□ -0.1
COL8A1-202ENST00000273342 CENPHQ9H3R5 247 aa14.43□□□□□ -0.1
COL8A1-202ENST00000273342 FER1L4A9Z1Z3 1794 aa14.43□□□□□ -0.1
COL8A1-202ENST00000273342 SHTN1A0MZ66 631 aa14.42□□□□□ -0.1
COL8A1-202ENST00000273342 NDUFAB1O14561 156 aa14.42□□□□□ -0.1
COL8A1-202ENST00000273342 ZNF263O14978 683 aa14.42□□□□□ -0.1
COL8A1-202ENST00000273342 BUB1O43683 1085 aa14.42□□□□□ -0.1
COL8A1-202ENST00000273342 C2CD5Q86YS7 1000 aa14.42□□□□□ -0.1
COL8A1-202ENST00000273342 DNAJC7Q99615 494 aa14.42□□□□□ -0.1
COL8A1-202ENST00000273342 RNF41Q9H4P4 317 aaPredicted RBP14.42□□□□□ -0.1
COL8A1-202ENST00000273342 CAPN11Q9UMQ6 739 aa14.42□□□□□ -0.1
COL8A1-202ENST00000273342 ECM29Q5VYK3 1845 aa14.42□□□□□ -0.1
COL8A1-202ENST00000273342 H7C1D1 291 aa14.42□□□□□ -0.1
COL8A1-202ENST00000273342 MYO1FO00160 1098 aa14.42□□□□□ -0.1
COL8A1-202ENST00000273342 MCM3P25205 808 aa14.42□□□□□ -0.1
COL8A1-202ENST00000273342 APBA1Q02410 837 aa14.42□□□□□ -0.1
COL8A1-202ENST00000273342 FUT2Q10981 343 aa14.42□□□□□ -0.1
COL8A1-202ENST00000273342 CCDC70Q6NSX1 233 aa14.42□□□□□ -0.1
COL8A1-202ENST00000273342 MMS22LQ6ZRQ5 1243 aa14.42□□□□□ -0.1
COL8A1-202ENST00000273342 JAG2Q9Y219 1238 aa14.42□□□□□ -0.1
COL8A1-202ENST00000273342 CAPN7Q9Y6W3 813 aa14.42□□□□□ -0.1
COL8A1-202ENST00000273342 INPP5BP32019 993 aa14.41□□□□□ -0.1
COL8A1-202ENST00000273342 GUCY2FP51841 1108 aa14.41□□□□□ -0.1
COL8A1-202ENST00000273342 SPA17Q15506 151 aa14.41□□□□□ -0.1
COL8A1-202ENST00000273342 PTPROQ16827 1216 aa14.41□□□□□ -0.1
COL8A1-202ENST00000273342 TMC4Q7Z404 712 aa14.41□□□□□ -0.1
COL8A1-202ENST00000273342 ADSSL1Q8N142 457 aa14.41□□□□□ -0.1
COL8A1-202ENST00000273342 FAM184BQ9ULE4 1060 aa14.41□□□□□ -0.1
COL8A1-202ENST00000273342 PCDH11XQ9BZA7 1347 aa14.41□□□□□ -0.1
COL8A1-202ENST00000273342 PCDH11YQ9BZA8 1340 aa14.41□□□□□ -0.1
COL8A1-202ENST00000273342 C1orf167Q5SNV9 1468 aa14.41□□□□□ -0.1
COL8A1-202ENST00000273342 RASSF10A6NK89 507 aa14.41□□□□□ -0.1
COL8A1-202ENST00000273342 PRPF3O43395 683 aaKnown RBP14.41□□□□□ -0.1
COL8A1-202ENST00000273342 WDR17Q8IZU2 1322 aa14.41□□□□□ -0.1
COL8A1-202ENST00000273342 FCER1AP12319 257 aa14.41□□□□□ -0.1
COL8A1-202ENST00000273342 HNRNPH1P31943 449 aaKnown RBP14.41□□□□□ -0.1
COL8A1-202ENST00000273342 GYG1P46976 350 aa14.41□□□□□ -0.1
COL8A1-202ENST00000273342 GUCY1A3Q02108 690 aa14.41□□□□□ -0.1
COL8A1-202ENST00000273342 PPFIA1Q13136 1202 aa14.41□□□□□ -0.1
COL8A1-202ENST00000273342 IQCA1Q86XH1 822 aa14.41□□□□□ -0.1
COL8A1-202ENST00000273342 CREG2Q8IUH2 290 aa14.41□□□□□ -0.1
COL8A1-202ENST00000273342 DHX37Q8IY37 1157 aaKnown RBP14.41□□□□□ -0.1
COL8A1-202ENST00000273342 PROCA1Q8NCQ7 364 aaPredicted RBP14.41□□□□□ -0.1
COL8A1-202ENST00000273342 SPATA4Q8NEY3 305 aa14.41□□□□□ -0.1
COL8A1-202ENST00000273342 NOC4LQ9BVI4 516 aaKnown RBP14.41□□□□□ -0.1
COL8A1-202ENST00000273342 IFIH1Q9BYX4 1025 aaKnown RBP14.41□□□□□ -0.1
COL8A1-202ENST00000273342 EXOC1Q9NV70 894 aa14.41□□□□□ -0.1
COL8A1-202ENST00000273342 TJP1Q07157 1748 aa14.41□□□□□ -0.1
COL8A1-202ENST00000273342 FAM170AA1A519 330 aa14.4□□□□□ -0.1
COL8A1-202ENST00000273342 PSMA7O14818 248 aa14.4□□□□□ -0.1
COL8A1-202ENST00000273342 EPHB6O15197 1021 aa14.4□□□□□ -0.1
COL8A1-202ENST00000273342 UBA7P41226 1012 aa14.4□□□□□ -0.1
COL8A1-202ENST00000273342 TROAPQ12815 778 aa14.4□□□□□ -0.1
COL8A1-202ENST00000273342 TTMPQ5BVD1 217 aa14.4□□□□□ -0.1
COL8A1-202ENST00000273342 CT47A1Q5JQC4 288 aaPredicted RBP14.4□□□□□ -0.1
COL8A1-202ENST00000273342 SMIM5Q71RC9 77 aa14.4□□□□□ -0.1
COL8A1-202ENST00000273342 ZNF507Q8TCN5 953 aa14.4□□□□□ -0.1
COL8A1-202ENST00000273342 TMEM60Q9H2L4 133 aa14.4□□□□□ -0.1
COL8A1-202ENST00000273342 MMRN2Q9H8L6 949 aa14.4□□□□□ -0.1
COL8A1-202ENST00000273342 RMND1Q9NWS8 449 aa14.4□□□□□ -0.1
COL8A1-202ENST00000273342 AKAP11Q9UKA4 1901 aa14.4□□□□□ -0.1
COL8A1-202ENST00000273342 ZBTB1Q9Y2K1 713 aa14.4□□□□□ -0.1
COL8A1-202ENST00000273342 SPEF2Q9C093 1822 aa14.4□□□□□ -0.1
COL8A1-202ENST00000273342 FAM205AQ6ZU69 1335 aa14.4□□□□□ -0.1
COL8A1-202ENST00000273342 MAGEB6P1A0A0J9YX57 407 aa14.4□□□□□ -0.1
COL8A1-202ENST00000273342 ERVV-2B6SEH9 535 aa14.4□□□□□ -0.1
COL8A1-202ENST00000273342 USP17L12C9JPN9 530 aa14.4□□□□□ -0.1
COL8A1-202ENST00000273342 USP17L21D6R901 530 aa14.4□□□□□ -0.1
COL8A1-202ENST00000273342 RNF187Q5TA31 235 aaPredicted RBP14.4□□□□□ -0.1
COL8A1-202ENST00000273342 AENQ8WTP8 325 aaKnown RBP14.4□□□□□ -0.1
COL8A1-202ENST00000273342 CNOT6LQ96LI5 555 aaKnown RBP14.4□□□□□ -0.1
COL8A1-202ENST00000273342 PLA2G12BQ9BX93 195 aa14.4□□□□□ -0.1
COL8A1-202ENST00000273342 GRIN2DO15399 1336 aa14.39□□□□□ -0.11
COL8A1-202ENST00000273342 TARSL2A2RTX5 802 aaKnown RBP14.39□□□□□ -0.11
COL8A1-202ENST00000273342 NUTM2BA6NNL0 878 aaPredicted RBP14.39□□□□□ -0.11
COL8A1-202ENST00000273342 NUTM2EB1AL46 878 aaPredicted RBP14.39□□□□□ -0.11
COL8A1-202ENST00000273342 EIF3HO15372 352 aaKnown RBP eCLIP14.39□□□□□ -0.11
COL8A1-202ENST00000273342 AKR1B10O60218 316 aa14.39□□□□□ -0.11
COL8A1-202ENST00000273342 SF3A3Q12874 501 aaKnown RBP eCLIP14.39□□□□□ -0.11
COL8A1-202ENST00000273342 NAALADL2Q58DX5 795 aa14.39□□□□□ -0.11
COL8A1-202ENST00000273342 ANKRD40Q6AI12 368 aa14.39□□□□□ -0.11
COL8A1-202ENST00000273342 TNFRSF25Q93038 417 aa14.39□□□□□ -0.11
COL8A1-202ENST00000273342 ATRNO75882 1429 aa14.39□□□□□ -0.11
COL8A1-202ENST00000273342 PDE8AO60658 829 aa14.39□□□□□ -0.11
COL8A1-202ENST00000273342 FAM153BP0C7A2 387 aa14.39□□□□□ -0.11
COL8A1-202ENST00000273342 IL2RBP14784 551 aa14.39□□□□□ -0.11
COL8A1-202ENST00000273342 SEC24CP53992 1094 aa14.39□□□□□ -0.11
COL8A1-202ENST00000273342 TRIM28Q13263 835 aaKnown RBP14.39□□□□□ -0.11
COL8A1-202ENST00000273342 TRADDQ15628 312 aa14.39□□□□□ -0.11
COL8A1-202ENST00000273342 INF2Q27J81 1249 aa14.39□□□□□ -0.11
COL8A1-202ENST00000273342 FAM153CQ494X1 144 aa14.39□□□□□ -0.11
COL8A1-202ENST00000273342 LRRC15Q8TF66 581 aa14.39□□□□□ -0.11
COL8A1-202ENST00000273342 ACSBG1Q96GR2 724 aa14.39□□□□□ -0.11
COL8A1-202ENST00000273342 ZNF512BQ96KM6 892 aaPredicted RBP14.39□□□□□ -0.11
COL8A1-202ENST00000273342 FAM153AQ9UHL3 310 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms