RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 RAB44Q7Z6P3 723 aaPredicted RBP8.72□□□□□ -1.01
LIMD1-201ENST00000273317 CTAGE3PQ8IX95 158 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 WHAMMQ8TF30 809 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 POLR2BP30876 1174 aaKnown RBP8.72□□□□□ -1.01
LIMD1-201ENST00000273317 TRAPPC3LQ5T215 181 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 NLRX1Q86UT6 975 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 GPIHBP1Q8IV16 184 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 ZSCAN10Q96SZ4 725 aaPredicted RBP8.72□□□□□ -1.01
LIMD1-201ENST00000273317 PDE6BP35913 854 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 JADE1Q6IE81 842 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 RRAGDQ9NQL2 400 aaPredicted RBP8.72□□□□□ -1.01
LIMD1-201ENST00000273317 SLC5A4Q9NY91 659 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 JRKLQ9Y4A0 524 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 CD19P15391 556 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 SEPT2Q15019 361 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 RNF14Q9UBS8 474 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 RPN1P04843 607 aaKnown RBP8.72□□□□□ -1.01
LIMD1-201ENST00000273317 HSPA6P17066 643 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 PRPSAP1Q14558 356 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 MYSM1Q5VVJ2 828 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 ALS2CLQ60I27 953 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 ZBTB8OSQ8IWT0 167 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 C17orf53Q8N3J3 647 aaPredicted RBP8.72□□□□□ -1.01
LIMD1-201ENST00000273317 ANKRD42Q8N9B4 389 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 TNNC2P02585 160 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 GSTA1P08263 222 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 GSTA2P09210 222 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 TNNI1P19237 187 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 LONP1P36776 959 aaKnown RBP8.72□□□□□ -1.01
LIMD1-201ENST00000273317 SCYL1Q96KG9 808 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 ANGPTL2Q9UKU9 493 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 GADD45BO75293 160 aaPredicted RBP8.72□□□□□ -1.01
LIMD1-201ENST00000273317 TRAPPC10P48553 1259 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 INPP1P49441 399 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 SPATS2LQ9NUQ6 558 aaKnown RBP8.72□□□□□ -1.01
LIMD1-201ENST00000273317 TBC1D7Q9P0N9 293 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 NOD1Q9Y239 953 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 MLH3Q9UHC1 1453 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 SERPINB6P35237 376 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 VPS41P49754 854 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 PIK3R5Q8WYR1 880 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 MAPK8IP1Q9UQF2 711 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 PZPP20742 1482 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 E7EWF7 191 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 SRRM1Q8IYB3 904 aaKnown RBP8.72□□□□□ -1.01
LIMD1-201ENST00000273317 LCMT1Q9UIC8 334 aa8.72□□□□□ -1.01
LIMD1-201ENST00000273317 ABCC4O15439 1325 aa8.71□□□□□ -1.01
LIMD1-201ENST00000273317 POLR1AO95602 1720 aaPredicted RBP8.71□□□□□ -1.01
LIMD1-201ENST00000273317 PPARAQ07869 468 aa8.71□□□□□ -1.01
LIMD1-201ENST00000273317 SPATA1Q5VX52 437 aa8.71□□□□□ -1.01
LIMD1-201ENST00000273317 NXNQ6DKJ4 435 aa8.71□□□□□ -1.01
LIMD1-201ENST00000273317 ZNF710Q8N1W2 664 aa8.71□□□□□ -1.01
LIMD1-201ENST00000273317 TSPYL6Q8N831 410 aa8.71□□□□□ -1.01
LIMD1-201ENST00000273317 NSFL1CQ9UNZ2 370 aaKnown RBP8.71□□□□□ -1.01
LIMD1-201ENST00000273317 OR52Z1P0C646 297 aa8.71□□□□□ -1.01
LIMD1-201ENST00000273317 ESRRGP62508 458 aa8.71□□□□□ -1.01
LIMD1-201ENST00000273317 CALR3Q96L12 384 aaKnown RBP8.71□□□□□ -1.01
LIMD1-201ENST00000273317 EFCC1Q9HA90 598 aa8.71□□□□□ -1.01
LIMD1-201ENST00000273317 STK17AQ9UEE5 414 aa8.71□□□□□ -1.01
LIMD1-201ENST00000273317 COL4A3BPQ9Y5P4 624 aa8.71□□□□□ -1.01
LIMD1-201ENST00000273317 IVNS1ABPQ9Y6Y0 642 aa8.71□□□□□ -1.01
LIMD1-201ENST00000273317 CPA1P15085 419 aa8.71□□□□□ -1.01
LIMD1-201ENST00000273317 BLIDQ8IZY5 108 aa8.71□□□□□ -1.01
LIMD1-201ENST00000273317 NRBF2Q96F24 287 aa8.71□□□□□ -1.01
LIMD1-201ENST00000273317 CENPKQ9BS16 269 aa8.71□□□□□ -1.01
LIMD1-201ENST00000273317 CCDC68Q9H2F9 335 aa8.71□□□□□ -1.01
LIMD1-201ENST00000273317 ETF1P62495 437 aaKnown RBP8.71□□□□□ -1.02
LIMD1-201ENST00000273317 DMTNQ08495 405 aa8.71□□□□□ -1.02
LIMD1-201ENST00000273317 PHKBQ93100 1093 aa8.71□□□□□ -1.02
LIMD1-201ENST00000273317 DHTKD1Q96HY7 919 aaPredicted RBP8.71□□□□□ -1.02
LIMD1-201ENST00000273317 ACTR5Q9H9F9 607 aaPredicted RBP8.71□□□□□ -1.02
LIMD1-201ENST00000273317 IRX5P78411 483 aaPredicted RBP8.71□□□□□ -1.02
LIMD1-201ENST00000273317 MCF2L2Q86YR7 1114 aa8.71□□□□□ -1.02
LIMD1-201ENST00000273317 PALM3A6NDB9 673 aaPredicted RBP8.71□□□□□ -1.02
LIMD1-201ENST00000273317 GAP43P17677 238 aa8.71□□□□□ -1.02
LIMD1-201ENST00000273317 PHEXP78562 749 aa8.71□□□□□ -1.02
LIMD1-201ENST00000273317 TMTC3Q6ZXV5 915 aa8.71□□□□□ -1.02
LIMD1-201ENST00000273317 LRRC8AQ8IWT6 810 aa8.71□□□□□ -1.02
LIMD1-201ENST00000273317 MYCLP12524 364 aaPredicted RBP8.71□□□□□ -1.02
LIMD1-201ENST00000273317 CFAP61Q8NHU2 1237 aa8.71□□□□□ -1.02
LIMD1-201ENST00000273317 DEPTORQ8TB45 409 aa8.71□□□□□ -1.02
LIMD1-201ENST00000273317 PDE11AQ9HCR9 933 aa8.71□□□□□ -1.02
LIMD1-201ENST00000273317 GNPATO15228 680 aa8.71□□□□□ -1.02
LIMD1-201ENST00000273317 ZNF790Q6PG37 636 aa8.71□□□□□ -1.02
LIMD1-201ENST00000273317 TESK2Q96S53 571 aa8.71□□□□□ -1.02
LIMD1-201ENST00000273317 CHL1O00533 1208 aa8.7□□□□□ -1.02
LIMD1-201ENST00000273317 NSFP46459 744 aaKnown RBP8.7□□□□□ -1.02
LIMD1-201ENST00000273317 SESN3P58005 492 aa8.7□□□□□ -1.02
LIMD1-201ENST00000273317 MMEL1Q495T6 779 aa8.7□□□□□ -1.02
LIMD1-201ENST00000273317 ZNF654Q8IZM8 581 aa8.7□□□□□ -1.02
LIMD1-201ENST00000273317 ZNF532Q9HCE3 1301 aa8.7□□□□□ -1.02
LIMD1-201ENST00000273317 hCG_1984214I3L0E3 225 aa8.7□□□□□ -1.02
LIMD1-201ENST00000273317 KRT19P08727 400 aa8.7□□□□□ -1.02
LIMD1-201ENST00000273317 ADKP55263 362 aaKnown RBP8.7□□□□□ -1.02
LIMD1-201ENST00000273317 ZNF713Q8N859 430 aaPredicted RBP8.7□□□□□ -1.02
LIMD1-201ENST00000273317 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.7□□□□□ -1.02
LIMD1-201ENST00000273317 PANK4Q9NVE7 773 aa8.7□□□□□ -1.02
LIMD1-201ENST00000273317 CCPG1Q9ULG6 757 aa8.7□□□□□ -1.02
LIMD1-201ENST00000273317 SEC24BO95487 1268 aa8.7□□□□□ -1.02
LIMD1-201ENST00000273317 GCKRQ14397 625 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms