RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 SENP2Q9HC62 589 aa20.67■□□□□ 0.9
SEC22C-202ENST00000273156 HMX1Q9NP08 348 aaPredicted RBP20.67■□□□□ 0.9
SEC22C-202ENST00000273156 RPTORQ8N122 1335 aa20.67■□□□□ 0.9
SEC22C-202ENST00000273156 PTPDC1A2A3K4 754 aa20.67■□□□□ 0.9
SEC22C-202ENST00000273156 JAK2O60674 1132 aa20.67■□□□□ 0.9
SEC22C-202ENST00000273156 CNMDO75829 334 aa20.67■□□□□ 0.9
SEC22C-202ENST00000273156 TFRCP02786 760 aaKnown RBP20.67■□□□□ 0.9
SEC22C-202ENST00000273156 MCM4P33991 863 aa20.67■□□□□ 0.9
SEC22C-202ENST00000273156 TFAP4Q01664 338 aa20.67■□□□□ 0.9
SEC22C-202ENST00000273156 FAM47AQ5JRC9 791 aa20.67■□□□□ 0.9
SEC22C-202ENST00000273156 MORN1Q5T089 497 aa20.67■□□□□ 0.9
SEC22C-202ENST00000273156 POTEEQ6S8J3 1075 aa20.67■□□□□ 0.9
SEC22C-202ENST00000273156 USP6NLQ92738 828 aa20.67■□□□□ 0.9
SEC22C-202ENST00000273156 DEFB118Q96PH6 123 aa20.67■□□□□ 0.9
SEC22C-202ENST00000273156 BAZ2AQ9UIF9 1905 aaKnown RBP20.66■□□□□ 0.9
SEC22C-202ENST00000273156 MKI67P46013 3256 aaKnown RBP20.66■□□□□ 0.9
SEC22C-202ENST00000273156 SLC15A5A6NIM6 579 aa20.66■□□□□ 0.9
SEC22C-202ENST00000273156 GOLGA8AA7E2F4 631 aa20.66■□□□□ 0.9
SEC22C-202ENST00000273156 PEX10O60683 326 aa20.66■□□□□ 0.9
SEC22C-202ENST00000273156 FLOT1O75955 427 aa20.66■□□□□ 0.9
SEC22C-202ENST00000273156 CDKL5O76039 1030 aa20.66■□□□□ 0.9
SEC22C-202ENST00000273156 CTDNEP1O95476 244 aa20.66■□□□□ 0.9
SEC22C-202ENST00000273156 RASA1P20936 1047 aa20.66■□□□□ 0.9
SEC22C-202ENST00000273156 WDR78Q5VTH9 848 aa20.66■□□□□ 0.9
SEC22C-202ENST00000273156 MICU3Q86XE3 530 aa20.66■□□□□ 0.9
SEC22C-202ENST00000273156 ENAHQ8N8S7 591 aaPredicted RBP20.66■□□□□ 0.9
SEC22C-202ENST00000273156 APBA2Q99767 749 aa20.66■□□□□ 0.9
SEC22C-202ENST00000273156 ANP32EQ9BTT0 268 aa20.66■□□□□ 0.9
SEC22C-202ENST00000273156 HTATIP2Q9BUP3 242 aa20.66■□□□□ 0.9
SEC22C-202ENST00000273156 CCDC196A0A1B0GTZ2 297 aa20.65■□□□□ 0.9
SEC22C-202ENST00000273156 STRNO43815 780 aa20.65■□□□□ 0.9
SEC22C-202ENST00000273156 TSPY3P0CV98 308 aa20.65■□□□□ 0.9
SEC22C-202ENST00000273156 TSPY8P0CW00 308 aa20.65■□□□□ 0.9
SEC22C-202ENST00000273156 ZSCAN22P10073 491 aaPredicted RBP20.65■□□□□ 0.9
SEC22C-202ENST00000273156 PPP2R5BQ15173 497 aa20.65■□□□□ 0.9
SEC22C-202ENST00000273156 SPICE1Q8N0Z3 855 aa20.65■□□□□ 0.9
SEC22C-202ENST00000273156 DDX11Q96FC9 970 aa20.65■□□□□ 0.9
SEC22C-202ENST00000273156 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.65■□□□□ 0.9
SEC22C-202ENST00000273156 TCP11L1Q9NUJ3 509 aa20.65■□□□□ 0.9
SEC22C-202ENST00000273156 BTBD7Q9P203 1132 aa20.65■□□□□ 0.9
SEC22C-202ENST00000273156 NYAP2Q9P242 653 aa20.65■□□□□ 0.9
SEC22C-202ENST00000273156 SYNPO2Q9UMS6 1093 aa20.65■□□□□ 0.9
SEC22C-202ENST00000273156 GOLGA6L22H0YM25 854 aa20.64■□□□□ 0.9
SEC22C-202ENST00000273156 DSG3P32926 999 aa20.64■□□□□ 0.9
SEC22C-202ENST00000273156 MAP2K5Q13163 448 aa20.64■□□□□ 0.9
SEC22C-202ENST00000273156 FOXD4L5Q5VV16 416 aaPredicted RBP20.64■□□□□ 0.9
SEC22C-202ENST00000273156 CATIPQ7Z7H3 387 aa20.64■□□□□ 0.9
SEC22C-202ENST00000273156 RAB11FIP4Q86YS3 637 aa20.64■□□□□ 0.9
SEC22C-202ENST00000273156 CLEC10AQ8IUN9 316 aa20.64■□□□□ 0.9
SEC22C-202ENST00000273156 ZNF654Q8IZM8 581 aa20.64■□□□□ 0.9
SEC22C-202ENST00000273156 SHCBP1Q8NEM2 672 aa20.64■□□□□ 0.9
SEC22C-202ENST00000273156 FOXD4L4Q8WXT5 416 aaPredicted RBP20.64■□□□□ 0.9
SEC22C-202ENST00000273156 TRIB2Q92519 343 aa20.64■□□□□ 0.9
SEC22C-202ENST00000273156 DDX11L8A8MPP1 907 aa20.64■□□□□ 0.89
SEC22C-202ENST00000273156 DTNBO60941 627 aa20.64■□□□□ 0.89
SEC22C-202ENST00000273156 FARP2O94887 1054 aaPredicted RBP20.64■□□□□ 0.89
SEC22C-202ENST00000273156 BAG4O95429 457 aaKnown RBP20.64■□□□□ 0.89
SEC22C-202ENST00000273156 CALM1P0DP23 149 aa20.64■□□□□ 0.89
SEC22C-202ENST00000273156 CALM2P0DP24 149 aa20.64■□□□□ 0.89
SEC22C-202ENST00000273156 CALM3P0DP25 149 aa20.64■□□□□ 0.89
SEC22C-202ENST00000273156 PTPREP23469 700 aa20.64■□□□□ 0.89
SEC22C-202ENST00000273156 PPP4R3BQ5MIZ7 849 aa20.64■□□□□ 0.89
SEC22C-202ENST00000273156 DGKHQ86XP1 1220 aa20.64■□□□□ 0.89
SEC22C-202ENST00000273156 SPATC1LQ9H0A9 340 aa20.64■□□□□ 0.89
SEC22C-202ENST00000273156 CRISPLD2Q9H0B8 497 aa20.64■□□□□ 0.89
SEC22C-202ENST00000273156 MROH8Q9H579 483 aa20.64■□□□□ 0.89
SEC22C-202ENST00000273156 ATP6V1DQ9Y5K8 247 aa20.64■□□□□ 0.89
SEC22C-202ENST00000273156 VPS37CA5D8V6 355 aaPredicted RBP20.63■□□□□ 0.89
SEC22C-202ENST00000273156 RXRAP19793 462 aa20.63■□□□□ 0.89
SEC22C-202ENST00000273156 PTMSP20962 102 aa20.63■□□□□ 0.89
SEC22C-202ENST00000273156 KIAA1755Q5JYT7 1200 aa20.63■□□□□ 0.89
SEC22C-202ENST00000273156 MAP3K21Q5TCX8 1036 aa20.63■□□□□ 0.89
SEC22C-202ENST00000273156 UBE2Q1Q7Z7E8 422 aa20.63■□□□□ 0.89
SEC22C-202ENST00000273156 ANKLE1Q8NAG6 615 aa20.63■□□□□ 0.89
SEC22C-202ENST00000273156 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.63■□□□□ 0.89
SEC22C-202ENST00000273156 MTMR6Q9Y217 621 aa20.63■□□□□ 0.89
SEC22C-202ENST00000273156 HOXC6P09630 235 aa20.62■□□□□ 0.89
SEC22C-202ENST00000273156 PRKAR2AP13861 404 aaKnown RBP20.62■□□□□ 0.89
SEC22C-202ENST00000273156 ADD1P35611 737 aaKnown RBP20.62■□□□□ 0.89
SEC22C-202ENST00000273156 RTN1Q16799 776 aa20.62■□□□□ 0.89
SEC22C-202ENST00000273156 FANCBQ8NB91 859 aa20.62■□□□□ 0.89
SEC22C-202ENST00000273156 MYL10Q9BUA6 226 aa20.62■□□□□ 0.89
SEC22C-202ENST00000273156 SLC5A4Q9NY91 659 aa20.62■□□□□ 0.89
SEC22C-202ENST00000273156 NID2Q14112 1375 aa20.62■□□□□ 0.89
SEC22C-202ENST00000273156 H3BQV1 296 aa20.61■□□□□ 0.89
SEC22C-202ENST00000273156 DDAH1O94760 285 aa20.61■□□□□ 0.89
SEC22C-202ENST00000273156 F13A1P00488 732 aa20.61■□□□□ 0.89
SEC22C-202ENST00000273156 GRB14Q14449 540 aa20.61■□□□□ 0.89
SEC22C-202ENST00000273156 MFSD14CQ5VZR4 134 aa20.61■□□□□ 0.89
SEC22C-202ENST00000273156 CCDC144CPQ8IYA2 1237 aa20.61■□□□□ 0.89
SEC22C-202ENST00000273156 NEDD1Q8NHV4 660 aa20.61■□□□□ 0.89
SEC22C-202ENST00000273156 NUP133Q8WUM0 1156 aa20.61■□□□□ 0.89
SEC22C-202ENST00000273156 ANKS1AQ92625 1134 aa20.61■□□□□ 0.89
SEC22C-202ENST00000273156 MOV10L1Q9BXT6 1211 aaKnown RBP20.61■□□□□ 0.89
SEC22C-202ENST00000273156 RAD21O60216 631 aa20.6■□□□□ 0.89
SEC22C-202ENST00000273156 SLC25A27O95847 323 aa20.6■□□□□ 0.89
SEC22C-202ENST00000273156 CDC27P30260 824 aa20.6■□□□□ 0.89
SEC22C-202ENST00000273156 COPB2P35606 906 aa20.6■□□□□ 0.89
SEC22C-202ENST00000273156 ABRAQ8N0Z2 381 aa20.6■□□□□ 0.89
SEC22C-202ENST00000273156 ORC3Q9UBD5 711 aaPredicted RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms