RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 ERCC5P28715 1186 aaPredicted RBP14.03□□□□□ -0.16
UBXN4-201ENST00000272638 CYP26C1Q6V0L0 522 aa14.03□□□□□ -0.16
UBXN4-201ENST00000272638 CEP89Q96ST8 783 aa14.03□□□□□ -0.16
UBXN4-201ENST00000272638 PHF20Q9BVI0 1012 aa14.03□□□□□ -0.16
UBXN4-201ENST00000272638 SLIT3O75094 1523 aa14.03□□□□□ -0.16
UBXN4-201ENST00000272638 A0A087X0B3 334 aa14.03□□□□□ -0.16
UBXN4-201ENST00000272638 SPDYE3A6NKU9 549 aa14.03□□□□□ -0.16
UBXN4-201ENST00000272638 TMCO5BA8MYB1 307 aa14.03□□□□□ -0.16
UBXN4-201ENST00000272638 DDX39AO00148 427 aaKnown RBP14.03□□□□□ -0.16
UBXN4-201ENST00000272638 RRAGAQ7L523 313 aa14.03□□□□□ -0.16
UBXN4-201ENST00000272638 FAM114A1Q8IWE2 563 aa14.03□□□□□ -0.16
UBXN4-201ENST00000272638 LEMD3Q9Y2U8 911 aa14.03□□□□□ -0.16
UBXN4-201ENST00000272638 THRAP3Q9Y2W1 955 aaKnown RBP14.03□□□□□ -0.16
UBXN4-201ENST00000272638 PARP3Q9Y6F1 533 aa14.03□□□□□ -0.16
UBXN4-201ENST00000272638 TXNRD1Q16881 649 aa14.03□□□□□ -0.16
UBXN4-201ENST00000272638 NAPGQ99747 312 aaPredicted RBP14.03□□□□□ -0.16
UBXN4-201ENST00000272638 ACBD3Q9H3P7 528 aa14.03□□□□□ -0.16
UBXN4-201ENST00000272638 APBA3O96018 575 aa14.02□□□□□ -0.16
UBXN4-201ENST00000272638 BMP6P22004 513 aa14.02□□□□□ -0.16
UBXN4-201ENST00000272638 MRPL12P52815 198 aaKnown RBP14.02□□□□□ -0.16
UBXN4-201ENST00000272638 GYS2P54840 703 aa14.02□□□□□ -0.16
UBXN4-201ENST00000272638 SP4Q02446 784 aa14.02□□□□□ -0.16
UBXN4-201ENST00000272638 RAPGEF1Q13905 1077 aa14.02□□□□□ -0.16
UBXN4-201ENST00000272638 TBC1D10BQ4KMP7 808 aaPredicted RBP14.02□□□□□ -0.16
UBXN4-201ENST00000272638 ZFYVE27Q5T4F4 411 aa14.02□□□□□ -0.16
UBXN4-201ENST00000272638 FBXO33Q7Z6M2 555 aa14.02□□□□□ -0.16
UBXN4-201ENST00000272638 HPSEQ9Y251 543 aa14.02□□□□□ -0.16
UBXN4-201ENST00000272638 MEIS1O00470 390 aa14.02□□□□□ -0.17
UBXN4-201ENST00000272638 SEMA3EO15041 775 aa14.02□□□□□ -0.17
UBXN4-201ENST00000272638 ACTN4O43707 911 aaKnown RBP14.02□□□□□ -0.17
UBXN4-201ENST00000272638 KRT86O43790 486 aa14.02□□□□□ -0.17
UBXN4-201ENST00000272638 CLCN6P51797 869 aa14.02□□□□□ -0.17
UBXN4-201ENST00000272638 PRPF4BQ13523 1007 aaKnown RBP14.02□□□□□ -0.17
UBXN4-201ENST00000272638 SEC23AQ15436 765 aa14.02□□□□□ -0.17
UBXN4-201ENST00000272638 PKN1Q16512 942 aa14.02□□□□□ -0.17
UBXN4-201ENST00000272638 C12orf60Q5U649 245 aa14.02□□□□□ -0.17
UBXN4-201ENST00000272638 OR8K1Q8NGG5 319 aa14.02□□□□□ -0.17
UBXN4-201ENST00000272638 TUBGCP2Q9BSJ2 902 aa14.02□□□□□ -0.17
UBXN4-201ENST00000272638 VPS18Q9P253 973 aa14.02□□□□□ -0.17
UBXN4-201ENST00000272638 EIF3JO75822 258 aaKnown RBP14.02□□□□□ -0.17
UBXN4-201ENST00000272638 CFBP00751 764 aa14.02□□□□□ -0.17
UBXN4-201ENST00000272638 TMTC1Q8IUR5 882 aa14.02□□□□□ -0.17
UBXN4-201ENST00000272638 CUL5Q93034 780 aa14.02□□□□□ -0.17
UBXN4-201ENST00000272638 QTRT2Q9H974 415 aaKnown RBP14.02□□□□□ -0.17
UBXN4-201ENST00000272638 DISC1Q9NRI5 854 aa14.02□□□□□ -0.17
UBXN4-201ENST00000272638 FCER1AP12319 257 aa14.01□□□□□ -0.17
UBXN4-201ENST00000272638 ATP2B4P23634 1241 aa14.01□□□□□ -0.17
UBXN4-201ENST00000272638 LONP1P36776 959 aaKnown RBP14.01□□□□□ -0.17
UBXN4-201ENST00000272638 PRR16Q569H4 304 aa14.01□□□□□ -0.17
UBXN4-201ENST00000272638 TTBK2Q6IQ55 1244 aa14.01□□□□□ -0.17
UBXN4-201ENST00000272638 CLRN2A0PK11 232 aa14.01□□□□□ -0.17
UBXN4-201ENST00000272638 BICDL2A1A5D9 508 aa14.01□□□□□ -0.17
UBXN4-201ENST00000272638 USP17L15C9J2P7 530 aa14.01□□□□□ -0.17
UBXN4-201ENST00000272638 USP17L13C9JLJ4 530 aa14.01□□□□□ -0.17
UBXN4-201ENST00000272638 USP17L11C9JVI0 530 aa14.01□□□□□ -0.17
UBXN4-201ENST00000272638 USP17L18D6R9N7 530 aa14.01□□□□□ -0.17
UBXN4-201ENST00000272638 USP17L22D6RA61 530 aa14.01□□□□□ -0.17
UBXN4-201ENST00000272638 USP17L17D6RBQ6 530 aa14.01□□□□□ -0.17
UBXN4-201ENST00000272638 USP17L19D6RCP7 530 aa14.01□□□□□ -0.17
UBXN4-201ENST00000272638 USP17L20D6RJB6 530 aa14.01□□□□□ -0.17
UBXN4-201ENST00000272638 FXR1P51114 621 aaKnown RBP eCLIP14.01□□□□□ -0.17
UBXN4-201ENST00000272638 USP17L24Q0WX57 530 aa14.01□□□□□ -0.17
UBXN4-201ENST00000272638 USP17L6PQ6QN14 398 aa14.01□□□□□ -0.17
UBXN4-201ENST00000272638 TICAM2Q86XR7 235 aa14.01□□□□□ -0.17
UBXN4-201ENST00000272638 NEK11Q8NG66 645 aa14.01□□□□□ -0.17
UBXN4-201ENST00000272638 SMCR8Q8TEV9 937 aaPredicted RBP14.01□□□□□ -0.17
UBXN4-201ENST00000272638 JAKMIP2Q96AA8 810 aa14.01□□□□□ -0.17
UBXN4-201ENST00000272638 CNOT6LQ96LI5 555 aaKnown RBP14.01□□□□□ -0.17
UBXN4-201ENST00000272638 SCAF8Q9UPN6 1271 aaKnown RBP14.01□□□□□ -0.17
UBXN4-201ENST00000272638 TNS2Q63HR2 1409 aa14.01□□□□□ -0.17
UBXN4-201ENST00000272638 TFRCP02786 760 aaKnown RBP14.01□□□□□ -0.17
UBXN4-201ENST00000272638 CT47A1Q5JQC4 288 aaPredicted RBP14.01□□□□□ -0.17
UBXN4-201ENST00000272638 CCDC174Q6PII3 467 aa14.01□□□□□ -0.17
UBXN4-201ENST00000272638 PSTPIP2Q9H939 334 aa14.01□□□□□ -0.17
UBXN4-201ENST00000272638 ZCCHC17Q9NP64 241 aaKnown RBP14.01□□□□□ -0.17
UBXN4-201ENST00000272638 EPN1Q9Y6I3 576 aaPredicted RBP14.01□□□□□ -0.17
UBXN4-201ENST00000272638 SPATA31A5Q5VU36 1347 aa14.01□□□□□ -0.17
UBXN4-201ENST00000272638 SPATA31A7Q8IWB4 1347 aa14.01□□□□□ -0.17
UBXN4-201ENST00000272638 CNTNAP5Q8WYK1 1306 aa14.01□□□□□ -0.17
UBXN4-201ENST00000272638 TDP2O95551 362 aa14□□□□□ -0.17
UBXN4-201ENST00000272638 LEKR1Q6ZMV7 388 aa14□□□□□ -0.17
UBXN4-201ENST00000272638 DGKHQ86XP1 1220 aa14□□□□□ -0.17
UBXN4-201ENST00000272638 POTEDQ86YR6 584 aa14□□□□□ -0.17
UBXN4-201ENST00000272638 RDH13Q8NBN7 331 aa14□□□□□ -0.17
UBXN4-201ENST00000272638 PCDHA12Q9UN75 941 aa14□□□□□ -0.17
UBXN4-201ENST00000272638 BPIFA3Q9BQP9 254 aa14□□□□□ -0.17
UBXN4-201ENST00000272638 MRPL44Q9H9J2 332 aaKnown RBP14□□□□□ -0.17
UBXN4-201ENST00000272638 SERPINB13Q9UIV8 391 aa14□□□□□ -0.17
UBXN4-201ENST00000272638 PCDHA1Q9Y5I3 950 aa14□□□□□ -0.17
UBXN4-201ENST00000272638 FAM205AQ6ZU69 1335 aa14□□□□□ -0.17
UBXN4-201ENST00000272638 TCP10L2B9ZVM9 353 aa14□□□□□ -0.17
UBXN4-201ENST00000272638 SRGAP2O75044 1071 aa14□□□□□ -0.17
UBXN4-201ENST00000272638 TBCAO75347 108 aaKnown RBP14□□□□□ -0.17
UBXN4-201ENST00000272638 FGFR1OPO95684 399 aaKnown RBP14□□□□□ -0.17
UBXN4-201ENST00000272638 AKR1B1P15121 316 aa14□□□□□ -0.17
UBXN4-201ENST00000272638 PAFAH1B1P43034 410 aa14□□□□□ -0.17
UBXN4-201ENST00000272638 PRR5LQ6MZQ0 368 aa14□□□□□ -0.17
UBXN4-201ENST00000272638 CPXCR1Q8N123 301 aa14□□□□□ -0.17
UBXN4-201ENST00000272638 TEKT1Q969V4 418 aa14□□□□□ -0.17
UBXN4-201ENST00000272638 CHP1Q99653 195 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms