RNA–Protein interactions for RNA: ENST00000266735.9

SNRPF-201, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPF, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-201ENST00000266735 TMTC3Q6ZXV5 915 aa19.15■□□□□ 0.66
SNRPF-201ENST00000266735 RIOX2Q8IUF8 465 aa19.15■□□□□ 0.66
SNRPF-201ENST00000266735 CPXCR1Q8N123 301 aa19.15■□□□□ 0.66
SNRPF-201ENST00000266735 CD99L2Q8TCZ2 262 aa19.15■□□□□ 0.66
SNRPF-201ENST00000266735 SPZ1Q9BXG8 430 aa19.15■□□□□ 0.66
SNRPF-201ENST00000266735 RIOX1Q9H6W3 641 aa19.15■□□□□ 0.66
SNRPF-201ENST00000266735 JMJD4Q9H9V9 463 aa19.15■□□□□ 0.66
SNRPF-201ENST00000266735 RAVER2Q9HCJ3 691 aaKnown RBP19.15■□□□□ 0.66
SNRPF-201ENST00000266735 HPS5Q9UPZ3 1129 aa19.15■□□□□ 0.66
SNRPF-201ENST00000266735 ZNF536O15090 1300 aa19.14■□□□□ 0.65
SNRPF-201ENST00000266735 PLEKHA8P1O95397 391 aa19.14■□□□□ 0.65
SNRPF-201ENST00000266735 GNRH1P01148 92 aa19.14■□□□□ 0.65
SNRPF-201ENST00000266735 ICAM1P05362 532 aa19.14■□□□□ 0.65
SNRPF-201ENST00000266735 PSMC4P43686 418 aa19.14■□□□□ 0.65
SNRPF-201ENST00000266735 SNAP25P60880 206 aa19.14■□□□□ 0.65
SNRPF-201ENST00000266735 CDC37Q16543 378 aaPredicted RBP19.14■□□□□ 0.65
SNRPF-201ENST00000266735 CCDC174Q6PII3 467 aa19.14■□□□□ 0.65
SNRPF-201ENST00000266735 NBPF11Q86T75 865 aa19.14■□□□□ 0.65
SNRPF-201ENST00000266735 PORCNQ9H237 461 aa19.14■□□□□ 0.65
SNRPF-201ENST00000266735 MROH8Q9H579 483 aa19.14■□□□□ 0.65
SNRPF-201ENST00000266735 VAT1LQ9HCJ6 419 aa19.14■□□□□ 0.65
SNRPF-201ENST00000266735 TNPO2O14787 897 aaKnown RBP19.13■□□□□ 0.65
SNRPF-201ENST00000266735 CYTH3O43739 400 aa19.13■□□□□ 0.65
SNRPF-201ENST00000266735 ST18O60284 1047 aa19.13■□□□□ 0.65
SNRPF-201ENST00000266735 FMNL1O95466 1100 aaPredicted RBP19.13■□□□□ 0.65
SNRPF-201ENST00000266735 ERCC3P19447 782 aa19.13■□□□□ 0.65
SNRPF-201ENST00000266735 NCAPG2Q86XI2 1143 aa19.13■□□□□ 0.65
SNRPF-201ENST00000266735 SRBD1Q8N5C6 995 aaKnown RBP19.13■□□□□ 0.65
SNRPF-201ENST00000266735 MTMR8Q96EF0 704 aa19.13■□□□□ 0.65
SNRPF-201ENST00000266735 LARP6Q9BRS8 491 aaKnown RBP19.13■□□□□ 0.65
SNRPF-201ENST00000266735 ARHGAP39Q9C0H5 1083 aa19.13■□□□□ 0.65
SNRPF-201ENST00000266735 EFCC1Q9HA90 598 aa19.13■□□□□ 0.65
SNRPF-201ENST00000266735 CWC22Q9HCG8 908 aaKnown RBP19.13■□□□□ 0.65
SNRPF-201ENST00000266735 TPCN1Q9ULQ1 816 aa19.13■□□□□ 0.65
SNRPF-201ENST00000266735 A0A0G2JMZ2 1700 aa19.13■□□□□ 0.65
SNRPF-201ENST00000266735 ZBTB5O15062 677 aa19.12■□□□□ 0.65
SNRPF-201ENST00000266735 CDC27P30260 824 aa19.12■□□□□ 0.65
SNRPF-201ENST00000266735 SLC35G1Q2M3R5 365 aa19.12■□□□□ 0.65
SNRPF-201ENST00000266735 TKFCQ3LXA3 575 aa19.12■□□□□ 0.65
SNRPF-201ENST00000266735 AGBL1Q96MI9 1066 aa19.12■□□□□ 0.65
SNRPF-201ENST00000266735 FAM217BQ9NTX9 383 aaPredicted RBP19.12■□□□□ 0.65
SNRPF-201ENST00000266735 CCPG1Q9ULG6 757 aa19.12■□□□□ 0.65
SNRPF-201ENST00000266735 RLFQ13129 1914 aa19.11■□□□□ 0.65
SNRPF-201ENST00000266735 ECM2O94769 699 aaPredicted RBP19.11■□□□□ 0.65
SNRPF-201ENST00000266735 HOXD10P28358 340 aa19.11■□□□□ 0.65
SNRPF-201ENST00000266735 CTGFP29279 349 aa19.11■□□□□ 0.65
SNRPF-201ENST00000266735 ADD1P35611 737 aaKnown RBP19.11■□□□□ 0.65
SNRPF-201ENST00000266735 QRICH1Q2TAL8 776 aa19.11■□□□□ 0.65
SNRPF-201ENST00000266735 WDR78Q5VTH9 848 aa19.11■□□□□ 0.65
SNRPF-201ENST00000266735 GPR142Q7Z601 462 aa19.11■□□□□ 0.65
SNRPF-201ENST00000266735 PLEKHH3Q7Z736 793 aa19.11■□□□□ 0.65
SNRPF-201ENST00000266735 HOMER1Q86YM7 354 aa19.11■□□□□ 0.65
SNRPF-201ENST00000266735 CMTR1Q8N1G2 835 aaKnown RBP19.11■□□□□ 0.65
SNRPF-201ENST00000266735 CHST13Q8NET6 341 aa19.11■□□□□ 0.65
SNRPF-201ENST00000266735 COA7Q96BR5 231 aa19.11■□□□□ 0.65
SNRPF-201ENST00000266735 RRP36Q96EU6 259 aaKnown RBP19.11■□□□□ 0.65
SNRPF-201ENST00000266735 TRIM47Q96LD4 638 aa19.11■□□□□ 0.65
SNRPF-201ENST00000266735 SLKQ9H2G2 1235 aaPredicted RBP19.11■□□□□ 0.65
SNRPF-201ENST00000266735 FBXO40Q9UH90 709 aa19.11■□□□□ 0.65
SNRPF-201ENST00000266735 RIPK3Q9Y572 518 aa19.11■□□□□ 0.65
SNRPF-201ENST00000266735 IVNS1ABPQ9Y6Y0 642 aa19.11■□□□□ 0.65
SNRPF-201ENST00000266735 SLC4A3P48751 1232 aa19.1■□□□□ 0.65
SNRPF-201ENST00000266735 CCT2P78371 535 aaKnown RBP19.1■□□□□ 0.65
SNRPF-201ENST00000266735 TRAF1Q13077 416 aa19.1■□□□□ 0.65
SNRPF-201ENST00000266735 NOL8Q76FK4 1167 aaKnown RBP19.1■□□□□ 0.65
SNRPF-201ENST00000266735 CCDC82Q8N4S0 544 aa19.1■□□□□ 0.65
SNRPF-201ENST00000266735 PIGSQ96S52 555 aa19.1■□□□□ 0.65
SNRPF-201ENST00000266735 SEC63Q9UGP8 760 aaKnown RBP19.1■□□□□ 0.65
SNRPF-201ENST00000266735 PNMA6FA0A0J9YX94 578 aa19.09■□□□□ 0.65
SNRPF-201ENST00000266735 STRNO43815 780 aa19.09■□□□□ 0.65
SNRPF-201ENST00000266735 PFKFB2O60825 505 aa19.09■□□□□ 0.65
SNRPF-201ENST00000266735 ALAS1P13196 640 aa19.09■□□□□ 0.65
SNRPF-201ENST00000266735 CAP1Q01518 475 aa19.09■□□□□ 0.65
SNRPF-201ENST00000266735 FUT2Q10981 343 aa19.09■□□□□ 0.65
SNRPF-201ENST00000266735 STK3Q13188 491 aa19.09■□□□□ 0.65
SNRPF-201ENST00000266735 FBXO11Q86XK2 927 aa19.09■□□□□ 0.65
SNRPF-201ENST00000266735 SOCS4Q8WXH5 440 aa19.09■□□□□ 0.65
SNRPF-201ENST00000266735 AMNQ9BXJ7 453 aa19.09■□□□□ 0.65
SNRPF-201ENST00000266735 LIMCH1Q9UPQ0 1083 aa19.09■□□□□ 0.65
SNRPF-201ENST00000266735 TRIM17Q9Y577 477 aa19.09■□□□□ 0.65
SNRPF-201ENST00000266735 CNTNAP5Q8WYK1 1306 aa19.09■□□□□ 0.65
SNRPF-201ENST00000266735 CPLX1O14810 134 aa19.08■□□□□ 0.65
SNRPF-201ENST00000266735 PTPREP23469 700 aa19.08■□□□□ 0.65
SNRPF-201ENST00000266735 PRMT2P55345 433 aa19.08■□□□□ 0.65
SNRPF-201ENST00000266735 SCRN1Q12765 414 aa19.08■□□□□ 0.65
SNRPF-201ENST00000266735 ME3Q16798 604 aa19.08■□□□□ 0.65
SNRPF-201ENST00000266735 CPLX2Q6PUV4 134 aaKnown RBP19.08■□□□□ 0.65
SNRPF-201ENST00000266735 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.08■□□□□ 0.65
SNRPF-201ENST00000266735 OTOP1Q7RTM1 612 aa19.08■□□□□ 0.65
SNRPF-201ENST00000266735 CTU1Q7Z7A3 348 aaKnown RBP19.08■□□□□ 0.65
SNRPF-201ENST00000266735 ABRAQ8N0Z2 381 aa19.08■□□□□ 0.65
SNRPF-201ENST00000266735 TRERF1Q96PN7 1200 aa19.08■□□□□ 0.65
SNRPF-201ENST00000266735 ACAD9Q9H845 621 aa19.08■□□□□ 0.65
SNRPF-201ENST00000266735 NCOA5Q9HCD5 579 aaKnown RBP19.08■□□□□ 0.65
SNRPF-201ENST00000266735 RNF146Q9NTX7 359 aa19.08■□□□□ 0.65
SNRPF-201ENST00000266735 ABCB11O95342 1321 aa19.08■□□□□ 0.64
SNRPF-201ENST00000266735 FCER1AP12319 257 aa19.07■□□□□ 0.64
SNRPF-201ENST00000266735 MCM2P49736 904 aa19.07■□□□□ 0.64
SNRPF-201ENST00000266735 USH1GQ495M9 461 aa19.07■□□□□ 0.64
SNRPF-201ENST00000266735 ZSCAN31Q96LW9 406 aaPredicted RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms