RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 RBM27Q9P2N5 1060 aaKnown RBP16.57■□□□□ 0.24
SSBP1-201ENST00000265304 MTMR7Q9Y216 660 aa16.57■□□□□ 0.24
SSBP1-201ENST00000265304 PNMA6FA0A0J9YX94 578 aa16.56■□□□□ 0.24
SSBP1-201ENST00000265304 ZBTB5O15062 677 aa16.56■□□□□ 0.24
SSBP1-201ENST00000265304 ZBED4O75132 1171 aa16.56■□□□□ 0.24
SSBP1-201ENST00000265304 TRPA1O75762 1119 aa16.56■□□□□ 0.24
SSBP1-201ENST00000265304 CTDNEP1O95476 244 aa16.56■□□□□ 0.24
SSBP1-201ENST00000265304 ICAM1P05362 532 aa16.56■□□□□ 0.24
SSBP1-201ENST00000265304 ERVK-9P63128 1117 aa16.56■□□□□ 0.24
SSBP1-201ENST00000265304 ERVK-24P63145 666 aa16.56■□□□□ 0.24
SSBP1-201ENST00000265304 CUL4AQ13619 759 aa16.56■□□□□ 0.24
SSBP1-201ENST00000265304 Q3C1V9 767 aa16.56■□□□□ 0.24
SSBP1-201ENST00000265304 FAM177A1Q8N128 213 aaPredicted RBP16.56■□□□□ 0.24
SSBP1-201ENST00000265304 GPRC5AQ8NFJ5 357 aa16.56■□□□□ 0.24
SSBP1-201ENST00000265304 SMCR8Q8TEV9 937 aaPredicted RBP16.56■□□□□ 0.24
SSBP1-201ENST00000265304 TEX13BQ9BXU2 312 aa16.56■□□□□ 0.24
SSBP1-201ENST00000265304 SPATC1LQ9H0A9 340 aa16.56■□□□□ 0.24
SSBP1-201ENST00000265304 CPVLQ9H3G5 476 aa16.56■□□□□ 0.24
SSBP1-201ENST00000265304 NCOA5Q9HCD5 579 aaKnown RBP16.56■□□□□ 0.24
SSBP1-201ENST00000265304 STK36Q9NRP7 1315 aa16.55■□□□□ 0.24
SSBP1-201ENST00000265304 COPB2P35606 906 aa16.55■□□□□ 0.24
SSBP1-201ENST00000265304 STAT3P40763 770 aa16.55■□□□□ 0.24
SSBP1-201ENST00000265304 CCT2P78371 535 aaKnown RBP16.55■□□□□ 0.24
SSBP1-201ENST00000265304 GHRHRQ02643 423 aa16.55■□□□□ 0.24
SSBP1-201ENST00000265304 TRAF1Q13077 416 aa16.55■□□□□ 0.24
SSBP1-201ENST00000265304 TKFCQ3LXA3 575 aa16.55■□□□□ 0.24
SSBP1-201ENST00000265304 RAB11FIP4Q86YS3 637 aa16.55■□□□□ 0.24
SSBP1-201ENST00000265304 CCDC144CPQ8IYA2 1237 aa16.55■□□□□ 0.24
SSBP1-201ENST00000265304 SMARCC2Q8TAQ2 1214 aa16.55■□□□□ 0.24
SSBP1-201ENST00000265304 PPP1R11O60927 126 aaPredicted RBP16.54■□□□□ 0.24
SSBP1-201ENST00000265304 FMNL1O95466 1100 aaPredicted RBP16.54■□□□□ 0.24
SSBP1-201ENST00000265304 SLC25A27O95847 323 aa16.54■□□□□ 0.24
SSBP1-201ENST00000265304 PKN1Q16512 942 aa16.54■□□□□ 0.24
SSBP1-201ENST00000265304 CDC37Q16543 378 aaPredicted RBP16.54■□□□□ 0.24
SSBP1-201ENST00000265304 QRICH1Q2TAL8 776 aa16.54■□□□□ 0.24
SSBP1-201ENST00000265304 CPLX2Q6PUV4 134 aaKnown RBP16.54■□□□□ 0.24
SSBP1-201ENST00000265304 RGS22Q8NE09 1264 aa16.54■□□□□ 0.24
SSBP1-201ENST00000265304 PIGSQ96S52 555 aa16.54■□□□□ 0.24
SSBP1-201ENST00000265304 PLXNB2O15031 1838 aa16.54■□□□□ 0.24
SSBP1-201ENST00000265304 ZNF236Q9UL36 1845 aa16.54■□□□□ 0.24
SSBP1-201ENST00000265304 CASP8AP2Q9UKL3 1982 aa16.53■□□□□ 0.24
SSBP1-201ENST00000265304 hCG_1984214I3L0E3 225 aa16.53■□□□□ 0.24
SSBP1-201ENST00000265304 GPR25O00155 361 aa16.53■□□□□ 0.24
SSBP1-201ENST00000265304 CDKL5O76039 1030 aa16.53■□□□□ 0.24
SSBP1-201ENST00000265304 TBC1D8O95759 1140 aa16.53■□□□□ 0.24
SSBP1-201ENST00000265304 IKQ13123 557 aaPredicted RBP16.53■□□□□ 0.24
SSBP1-201ENST00000265304 CMTR1Q8N1G2 835 aaKnown RBP16.53■□□□□ 0.24
SSBP1-201ENST00000265304 ANKRD13CQ8N6S4 541 aa16.53■□□□□ 0.24
SSBP1-201ENST00000265304 ZNF713Q8N859 430 aaPredicted RBP16.53■□□□□ 0.24
SSBP1-201ENST00000265304 NECAB1Q8N987 351 aa16.53■□□□□ 0.24
SSBP1-201ENST00000265304 NSUN7Q8NE18 718 aaKnown RBP16.53■□□□□ 0.24
SSBP1-201ENST00000265304 RRP36Q96EU6 259 aaKnown RBP16.53■□□□□ 0.24
SSBP1-201ENST00000265304 AMNQ9BXJ7 453 aa16.53■□□□□ 0.24
SSBP1-201ENST00000265304 MOV10L1Q9BXT6 1211 aaKnown RBP16.53■□□□□ 0.24
SSBP1-201ENST00000265304 MROH8Q9H579 483 aa16.53■□□□□ 0.24
SSBP1-201ENST00000265304 CPA4Q9UI42 421 aa16.53■□□□□ 0.24
SSBP1-201ENST00000265304 V9GY48 417 aaPredicted RBP16.53■□□□□ 0.24
SSBP1-201ENST00000265304 K7ELQ4 463 aaPredicted RBP16.52■□□□□ 0.24
SSBP1-201ENST00000265304 FDPSP14324 419 aaKnown RBP16.52■□□□□ 0.24
SSBP1-201ENST00000265304 CCNA1P78396 465 aa16.52■□□□□ 0.24
SSBP1-201ENST00000265304 STK3Q13188 491 aa16.52■□□□□ 0.24
SSBP1-201ENST00000265304 PFKFB3Q16875 520 aaPredicted RBP16.52■□□□□ 0.24
SSBP1-201ENST00000265304 FBXO11Q86XK2 927 aa16.52■□□□□ 0.24
SSBP1-201ENST00000265304 ABRAQ8N0Z2 381 aa16.52■□□□□ 0.24
SSBP1-201ENST00000265304 SAMD3Q8N6K7 520 aa16.52■□□□□ 0.24
SSBP1-201ENST00000265304 CHST13Q8NET6 341 aa16.52■□□□□ 0.24
SSBP1-201ENST00000265304 INTS4Q96HW7 963 aaKnown RBP16.52■□□□□ 0.24
SSBP1-201ENST00000265304 BEGAINQ9BUH8 593 aa16.52■□□□□ 0.24
SSBP1-201ENST00000265304 NAP1L2Q9ULW6 460 aaPredicted RBP16.52■□□□□ 0.24
SSBP1-201ENST00000265304 RIPK3Q9Y572 518 aa16.52■□□□□ 0.24
SSBP1-201ENST00000265304 RBBP6Q7Z6E9 1792 aaKnown RBP16.51■□□□□ 0.23
SSBP1-201ENST00000265304 CPLX1O14810 134 aa16.51■□□□□ 0.23
SSBP1-201ENST00000265304 STRNO43815 780 aa16.51■□□□□ 0.23
SSBP1-201ENST00000265304 MAPK4P31152 587 aa16.51■□□□□ 0.23
SSBP1-201ENST00000265304 SP3Q02447 781 aa16.51■□□□□ 0.23
SSBP1-201ENST00000265304 CLEC4DQ8WXI8 215 aa16.51■□□□□ 0.23
SSBP1-201ENST00000265304 AGBL1Q96MI9 1066 aa16.51■□□□□ 0.23
SSBP1-201ENST00000265304 RAVER2Q9HCJ3 691 aaKnown RBP16.51■□□□□ 0.23
SSBP1-201ENST00000265304 VAT1LQ9HCJ6 419 aa16.51■□□□□ 0.23
SSBP1-201ENST00000265304 SH3GLB2Q9NR46 395 aa16.51■□□□□ 0.23
SSBP1-201ENST00000265304 FBXO40Q9UH90 709 aa16.51■□□□□ 0.23
SSBP1-201ENST00000265304 LCTP09848 1927 aa16.51■□□□□ 0.23
SSBP1-201ENST00000265304 PLXNA1Q9UIW2 1896 aa16.5■□□□□ 0.23
SSBP1-201ENST00000265304 ABCB11O95342 1321 aa16.5■□□□□ 0.23
SSBP1-201ENST00000265304 OPLAHO14841 1288 aa16.5■□□□□ 0.23
SSBP1-201ENST00000265304 PEX10O60683 326 aa16.5■□□□□ 0.23
SSBP1-201ENST00000265304 DEXIO95424 95 aa16.5■□□□□ 0.23
SSBP1-201ENST00000265304 SCG2P13521 617 aa16.5■□□□□ 0.23
SSBP1-201ENST00000265304 LACTBP83111 547 aaPredicted RBP16.5■□□□□ 0.23
SSBP1-201ENST00000265304 SSRP1Q08945 709 aaKnown RBP16.5■□□□□ 0.23
SSBP1-201ENST00000265304 SNRNP48Q6IEG0 339 aaKnown RBP16.5■□□□□ 0.23
SSBP1-201ENST00000265304 TRIM22Q8IYM9 498 aa16.5■□□□□ 0.23
SSBP1-201ENST00000265304 PHKBQ93100 1093 aa16.5■□□□□ 0.23
SSBP1-201ENST00000265304 PAGR1Q9BTK6 254 aa16.5■□□□□ 0.23
SSBP1-201ENST00000265304 PORCNQ9H237 461 aa16.5■□□□□ 0.23
SSBP1-201ENST00000265304 BARHL2Q9NY43 387 aa16.5■□□□□ 0.23
SSBP1-201ENST00000265304 MAP3K20Q9NYL2 800 aaKnown RBP16.5■□□□□ 0.23
SSBP1-201ENST00000265304 ESYT2A0FGR8 921 aa16.49■□□□□ 0.23
SSBP1-201ENST00000265304 GNRH1P01148 92 aa16.49■□□□□ 0.23
SSBP1-201ENST00000265304 ERCC3P19447 782 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms