RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 TSNARE1Q96NA8 513 aa12.85□□□□□ -0.35
DNMT3A-201ENST00000264709 AATFQ9NY61 560 aaKnown RBP eCLIP12.85□□□□□ -0.35
DNMT3A-201ENST00000264709 ADGRG1Q9Y653 693 aa12.85□□□□□ -0.35
DNMT3A-201ENST00000264709 PPFIA2O75334 1257 aa12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 BCRP11274 1271 aa12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 HOOK2Q96ED9 719 aa12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 CENPKQ9BS16 269 aa12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 IGSF1Q8N6C5 1336 aa12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 IFNAR1P17181 557 aa12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 AKNAD1Q5T1N1 836 aa12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 SMC1BQ8NDV3 1235 aa12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 ABHD10Q9NUJ1 306 aa12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 RPS6KA5O75582 802 aa12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 FERP16591 822 aa12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 INTS9Q9NV88 658 aaKnown RBP12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 AMOTL2Q9Y2J4 779 aa12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 NEURL1BA8MQ27 555 aa12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 ANXA13P27216 316 aa12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 TYW1BQ6NUM6 668 aa12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 TUBGCP2Q9BSJ2 902 aa12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 DONSONQ9NYP3 566 aa12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 GCFC2P16383 781 aaKnown RBP12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 LGSNQ5TDP6 509 aa12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 CAPRIN2Q6IMN6 1127 aaKnown RBP12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 ARHGAP27Q6ZUM4 889 aa12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 DBNDD2Q9BQY9 259 aa12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 ANAPC4Q9UJX5 808 aa12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 DIS3Q9Y2L1 958 aaKnown RBP12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 FOXP2O15409 715 aa12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 IL9RQ01113 521 aa12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 CCDC14Q49A88 953 aa12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 DDAH1O94760 285 aa12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 CYP21A2P08686 494 aa12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 TSPY3P0CV98 308 aa12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 TSPY8P0CW00 308 aa12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 SAMD1Q6SPF0 538 aaPredicted RBP12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 CHST3Q7LGC8 479 aa12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 FMO2Q99518 471 aa12.84□□□□□ -0.35
DNMT3A-201ENST00000264709 GGCXP38435 758 aa12.83□□□□□ -0.35
DNMT3A-201ENST00000264709 TCP11Q8WWU5 503 aa12.83□□□□□ -0.35
DNMT3A-201ENST00000264709 STX8Q9UNK0 236 aa12.83□□□□□ -0.35
DNMT3A-201ENST00000264709 CCDC160A6NGH7 325 aa12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 RPN1P04843 607 aaKnown RBP12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 XRCC5P13010 732 aaKnown RBP12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 NEK9Q8TD19 979 aa12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 RPUSD2Q8IZ73 545 aaKnown RBP12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 ATP6V1G3Q96LB4 118 aa12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 TSC22D3Q99576 134 aa12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 METTL14Q9HCE5 456 aaKnown RBP12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 NOC2LQ9Y3T9 749 aaKnown RBP12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 RNMTO43148 476 aaKnown RBP12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 ATP2B2Q01814 1243 aa12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 UBE3CQ15386 1083 aa12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 APOA5Q6Q788 366 aa12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 SRPRBQ9Y5M8 271 aaKnown RBP12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 ARID5AQ03989 594 aa12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 RBL2Q08999 1139 aa12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 ZNF790Q6PG37 636 aa12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 UBN2Q6ZU65 1347 aa12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 MROH5Q6ZUA9 1318 aa12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 NRKQ7Z2Y5 1582 aa12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 SOWAHDA6NJG2 315 aa12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 HOXC9P31274 260 aa12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 EIF4A1P60842 406 aaKnown RBP12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 LRRC63Q05C16 580 aa12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 INF2Q27J81 1249 aa12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 IL17RAQ96F46 866 aa12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 MROH2AA6NES4 1674 aa12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 SLC8A3P57103 927 aa12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 C6orf118Q5T5N4 469 aa12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 RRAGAQ7L523 313 aa12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 GSTA5Q7RTV2 222 aa12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 HEATR3Q7Z4Q2 680 aa12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 MYH3P11055 1940 aa12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 LMNB1P20700 586 aa12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 ELF1P32519 619 aa12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 ORC2Q13416 577 aaPredicted RBP12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 LRRC23Q53EV4 343 aaPredicted RBP12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 ARHGEF2Q92974 986 aaKnown RBP12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 MTMR7Q9Y216 660 aa12.83□□□□□ -0.36
DNMT3A-201ENST00000264709 TBC1D8O95759 1140 aa12.82□□□□□ -0.36
DNMT3A-201ENST00000264709 ZNF658Q5TYW1 1059 aaPredicted RBP12.82□□□□□ -0.36
DNMT3A-201ENST00000264709 PARP9Q8IXQ6 854 aa12.82□□□□□ -0.36
DNMT3A-201ENST00000264709 STOML1Q9UBI4 398 aa12.82□□□□□ -0.36
DNMT3A-201ENST00000264709 A0A1B0GTH6 734 aa12.82□□□□□ -0.36
DNMT3A-201ENST00000264709 PGBD1Q96JS3 809 aa12.82□□□□□ -0.36
DNMT3A-201ENST00000264709 WDR24Q96S15 920 aa12.82□□□□□ -0.36
DNMT3A-201ENST00000264709 MIS12Q9H081 205 aa12.82□□□□□ -0.36
DNMT3A-201ENST00000264709 STRN3Q13033 797 aa12.82□□□□□ -0.36
DNMT3A-201ENST00000264709 CCDC25Q86WR0 208 aa12.82□□□□□ -0.36
DNMT3A-201ENST00000264709 CRACR2BQ8N4Y2 399 aaPredicted RBP12.82□□□□□ -0.36
DNMT3A-201ENST00000264709 PHBP35232 272 aa12.82□□□□□ -0.36
DNMT3A-201ENST00000264709 PPP1R2P3Q6NXS1 205 aa12.82□□□□□ -0.36
DNMT3A-201ENST00000264709 REXO1Q8N1G1 1221 aaKnown RBP12.82□□□□□ -0.36
DNMT3A-201ENST00000264709 ATP1A3P13637 1013 aa12.82□□□□□ -0.36
DNMT3A-201ENST00000264709 TOGARAM2Q6ZUX3 1019 aa12.82□□□□□ -0.36
DNMT3A-201ENST00000264709 SRRM3A6NNA2 597 aaPredicted RBP12.82□□□□□ -0.36
DNMT3A-201ENST00000264709 ATP5J2-PTCD1G3V325 749 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms