RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 PLEKHG3A1L390 1219 aa16.63■□□□□ 0.25
CASC3-201ENST00000264645 FLOT1O75955 427 aa16.63■□□□□ 0.25
CASC3-201ENST00000264645 PDE6AP16499 860 aa16.63■□□□□ 0.25
CASC3-201ENST00000264645 ATP5DP30049 168 aa16.63■□□□□ 0.25
CASC3-201ENST00000264645 CCDC105Q8IYK2 499 aa16.63■□□□□ 0.25
CASC3-201ENST00000264645 LRRC1Q9BTT6 524 aa16.63■□□□□ 0.25
CASC3-201ENST00000264645 LSM14BQ9BX40 385 aaKnown RBP16.63■□□□□ 0.25
CASC3-201ENST00000264645 CD248Q9HCU0 757 aa16.63■□□□□ 0.25
CASC3-201ENST00000264645 HOMER2Q9NSB8 354 aa16.63■□□□□ 0.25
CASC3-201ENST00000264645 RWDD2AQ9UIY3 292 aa16.63■□□□□ 0.25
CASC3-201ENST00000264645 IGSF1Q8N6C5 1336 aa16.62■□□□□ 0.25
CASC3-201ENST00000264645 CETN3O15182 167 aa16.62■□□□□ 0.25
CASC3-201ENST00000264645 POTEJP0CG39 1038 aa16.62■□□□□ 0.25
CASC3-201ENST00000264645 SEL1L2Q5TEA6 688 aa16.62■□□□□ 0.25
CASC3-201ENST00000264645 PARP9Q8IXQ6 854 aa16.62■□□□□ 0.25
CASC3-201ENST00000264645 IQCGQ9H095 443 aaKnown RBP16.62■□□□□ 0.25
CASC3-201ENST00000264645 ASIC3Q9UHC3 531 aa16.62■□□□□ 0.25
CASC3-201ENST00000264645 TNKSO95271 1327 aa16.62■□□□□ 0.25
CASC3-201ENST00000264645 SPOPO43791 374 aa16.62■□□□□ 0.25
CASC3-201ENST00000264645 ABCB4P21439 1286 aa16.62■□□□□ 0.25
CASC3-201ENST00000264645 GNA11P29992 359 aa16.62■□□□□ 0.25
CASC3-201ENST00000264645 MB21D1Q8N884 522 aa16.62■□□□□ 0.25
CASC3-201ENST00000264645 ST3GAL1Q11201 340 aa16.62■□□□□ 0.25
CASC3-201ENST00000264645 HERC4Q5GLZ8 1057 aaPredicted RBP16.62■□□□□ 0.25
CASC3-201ENST00000264645 NFRKBQ6P4R8 1299 aa16.62■□□□□ 0.25
CASC3-201ENST00000264645 PCDHA13Q9Y5I0 950 aa16.62■□□□□ 0.25
CASC3-201ENST00000264645 CDK12Q9NYV4 1490 aaPredicted RBP16.62■□□□□ 0.25
CASC3-201ENST00000264645 CCDC169A6NNP5 214 aa16.61■□□□□ 0.25
CASC3-201ENST00000264645 PPP1R37O75864 691 aa16.61■□□□□ 0.25
CASC3-201ENST00000264645 KRT14P02533 472 aa16.61■□□□□ 0.25
CASC3-201ENST00000264645 KIF11P52732 1056 aa16.61■□□□□ 0.25
CASC3-201ENST00000264645 SEC24CP53992 1094 aa16.61■□□□□ 0.25
CASC3-201ENST00000264645 TAF11Q15544 211 aa16.61■□□□□ 0.25
CASC3-201ENST00000264645 ZNF658Q5TYW1 1059 aaPredicted RBP16.61■□□□□ 0.25
CASC3-201ENST00000264645 KRT28Q7Z3Y7 464 aa16.61■□□□□ 0.25
CASC3-201ENST00000264645 MLXIPQ9HAP2 919 aa16.61■□□□□ 0.25
CASC3-201ENST00000264645 TUBE1Q9UJT0 475 aa16.61■□□□□ 0.25
CASC3-201ENST00000264645 TRIM49BA6NDI0 452 aa16.61■□□□□ 0.25
CASC3-201ENST00000264645 FMNL1O95466 1100 aaPredicted RBP16.61■□□□□ 0.25
CASC3-201ENST00000264645 IFNAR1P17181 557 aa16.61■□□□□ 0.25
CASC3-201ENST00000264645 PLCB3Q01970 1234 aa16.61■□□□□ 0.25
CASC3-201ENST00000264645 CCNI2Q6ZMN8 369 aaPredicted RBP16.61■□□□□ 0.25
CASC3-201ENST00000264645 RASGRP2Q7LDG7 609 aa16.61■□□□□ 0.25
CASC3-201ENST00000264645 CROCCP2Q86T23 111 aa16.61■□□□□ 0.25
CASC3-201ENST00000264645 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.61■□□□□ 0.25
CASC3-201ENST00000264645 MADDQ8WXG6 1647 aa16.61■□□□□ 0.25
CASC3-201ENST00000264645 LUC7L3O95232 432 aaKnown RBP16.61■□□□□ 0.25
CASC3-201ENST00000264645 SLCO1A2P46721 670 aa16.61■□□□□ 0.25
CASC3-201ENST00000264645 PPP2R5BQ15173 497 aa16.61■□□□□ 0.25
CASC3-201ENST00000264645 RSRC2Q7L4I2 434 aaKnown RBP16.61■□□□□ 0.25
CASC3-201ENST00000264645 RETREG2Q8NC44 543 aa16.61■□□□□ 0.25
CASC3-201ENST00000264645 PPP1R14CQ8TAE6 165 aa16.61■□□□□ 0.25
CASC3-201ENST00000264645 GBP5Q96PP8 586 aa16.61■□□□□ 0.25
CASC3-201ENST00000264645 ELAC2Q9BQ52 826 aaKnown RBP16.61■□□□□ 0.25
CASC3-201ENST00000264645 GMNCA6NCL1 334 aa16.6■□□□□ 0.25
CASC3-201ENST00000264645 SH2B2O14492 632 aaPredicted RBP16.6■□□□□ 0.25
CASC3-201ENST00000264645 CTDNEP1O95476 244 aa16.6■□□□□ 0.25
CASC3-201ENST00000264645 TFRCP02786 760 aaKnown RBP16.6■□□□□ 0.25
CASC3-201ENST00000264645 RASIP1Q5U651 963 aa16.6■□□□□ 0.25
CASC3-201ENST00000264645 ZSCAN29Q8IWY8 852 aaPredicted RBP16.6■□□□□ 0.25
CASC3-201ENST00000264645 CCDC65Q8IXS2 484 aa16.6■□□□□ 0.25
CASC3-201ENST00000264645 WHAMMQ8TF30 809 aa16.6■□□□□ 0.25
CASC3-201ENST00000264645 TULP2O00295 520 aa16.6■□□□□ 0.25
CASC3-201ENST00000264645 EXOC5O00471 708 aa16.6■□□□□ 0.25
CASC3-201ENST00000264645 SUN1O94901 812 aa16.6■□□□□ 0.25
CASC3-201ENST00000264645 CCDC93Q567U6 631 aa16.6■□□□□ 0.25
CASC3-201ENST00000264645 ARMC9Q7Z3E5 817 aa16.6■□□□□ 0.25
CASC3-201ENST00000264645 VPS52Q8N1B4 723 aa16.6■□□□□ 0.25
CASC3-201ENST00000264645 SMCR8Q8TEV9 937 aaPredicted RBP16.6■□□□□ 0.25
CASC3-201ENST00000264645 IQCDQ96DY2 449 aa16.6■□□□□ 0.25
CASC3-201ENST00000264645 CCT8L2Q96SF2 557 aa16.6■□□□□ 0.25
CASC3-201ENST00000264645 FAM167BQ9BTA0 163 aa16.6■□□□□ 0.25
CASC3-201ENST00000264645 NUCKS1Q9H1E3 243 aaKnown RBP16.6■□□□□ 0.25
CASC3-201ENST00000264645 JAG2Q9Y219 1238 aa16.6■□□□□ 0.25
CASC3-201ENST00000264645 TNFAIP3P21580 790 aa16.6■□□□□ 0.25
CASC3-201ENST00000264645 INF2Q27J81 1249 aa16.6■□□□□ 0.25
CASC3-201ENST00000264645 ARMC2Q8NEN0 867 aa16.6■□□□□ 0.25
CASC3-201ENST00000264645 SPATA4Q8NEY3 305 aa16.6■□□□□ 0.25
CASC3-201ENST00000264645 ZSWIM5Q9P217 1185 aa16.6■□□□□ 0.25
CASC3-201ENST00000264645 AMFRQ9UKV5 643 aa16.6■□□□□ 0.25
CASC3-201ENST00000264645 ARHGEF40Q8TER5 1519 aa16.6■□□□□ 0.25
CASC3-201ENST00000264645 A0A1B0GTH6 734 aa16.6■□□□□ 0.25
CASC3-201ENST00000264645 ANO9A1A5B4 782 aa16.6■□□□□ 0.25
CASC3-201ENST00000264645 NCK2O43639 380 aa16.6■□□□□ 0.25
CASC3-201ENST00000264645 ADCY1Q08828 1119 aa16.6■□□□□ 0.25
CASC3-201ENST00000264645 KRT26Q7Z3Y9 468 aa16.6■□□□□ 0.25
CASC3-201ENST00000264645 SNX29Q8TEQ0 813 aa16.6■□□□□ 0.25
CASC3-201ENST00000264645 HVCN1Q96D96 273 aa16.6■□□□□ 0.25
CASC3-201ENST00000264645 NOP53Q9NZM5 478 aaKnown RBP16.6■□□□□ 0.25
CASC3-201ENST00000264645 POLE2P56282 527 aa16.59■□□□□ 0.25
CASC3-201ENST00000264645 U2AF1L4Q8WU68 220 aaKnown RBP16.59■□□□□ 0.25
CASC3-201ENST00000264645 CEP63Q96MT8 703 aa16.59■□□□□ 0.25
CASC3-201ENST00000264645 TRIM4Q9C037 500 aa16.59■□□□□ 0.25
CASC3-201ENST00000264645 CTTNBP2NLQ9P2B4 639 aa16.59■□□□□ 0.25
CASC3-201ENST00000264645 PBRM1Q86U86 1689 aa16.59■□□□□ 0.25
CASC3-201ENST00000264645 DCAF5Q96JK2 942 aa16.59■□□□□ 0.25
CASC3-201ENST00000264645 AP1M1Q9BXS5 423 aa16.59■□□□□ 0.25
CASC3-201ENST00000264645 TFR2Q9UP52 801 aa16.59■□□□□ 0.25
CASC3-201ENST00000264645 E9PCH4 1651 aa16.59■□□□□ 0.25
CASC3-201ENST00000264645 NR1I3Q14994 352 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms