RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 BECN1Q14457 450 aa13.53□□□□□ -0.24
PFDN1-201ENST00000261813 COG2Q14746 738 aa13.53□□□□□ -0.24
PFDN1-201ENST00000261813 WTAPQ15007 396 aa13.53□□□□□ -0.24
PFDN1-201ENST00000261813 SART3Q15020 963 aaKnown RBP13.53□□□□□ -0.24
PFDN1-201ENST00000261813 LBX2Q6XYB7 198 aa13.53□□□□□ -0.24
PFDN1-201ENST00000261813 KCTD1Q719H9 257 aa13.53□□□□□ -0.24
PFDN1-201ENST00000261813 DHX32Q7L7V1 743 aaKnown RBP13.53□□□□□ -0.24
PFDN1-201ENST00000261813 ANKRD13CQ8N6S4 541 aa13.53□□□□□ -0.24
PFDN1-201ENST00000261813 ATG4CQ96DT6 458 aa13.53□□□□□ -0.24
PFDN1-201ENST00000261813 TMEM87BQ96K49 555 aa13.53□□□□□ -0.24
PFDN1-201ENST00000261813 LY9Q9HBG7 655 aa13.53□□□□□ -0.24
PFDN1-201ENST00000261813 TXNRD2Q9NNW7 524 aa13.53□□□□□ -0.24
PFDN1-201ENST00000261813 RBPJLQ9UBG7 517 aa13.53□□□□□ -0.24
PFDN1-201ENST00000261813 PARP14Q460N5 1801 aa13.53□□□□□ -0.24
PFDN1-201ENST00000261813 TNRC18O15417 2968 aaPredicted RBP13.52□□□□□ -0.24
PFDN1-201ENST00000261813 A0A0G2JMZ2 1700 aa13.52□□□□□ -0.24
PFDN1-201ENST00000261813 ERICH2A1L162 156 aa13.52□□□□□ -0.25
PFDN1-201ENST00000261813 FKTNO75072 461 aa13.52□□□□□ -0.25
PFDN1-201ENST00000261813 MCM2P49736 904 aa13.52□□□□□ -0.25
PFDN1-201ENST00000261813 CAP1Q01518 475 aa13.52□□□□□ -0.25
PFDN1-201ENST00000261813 SP3Q02447 781 aa13.52□□□□□ -0.25
PFDN1-201ENST00000261813 FAM110CQ1W6H9 321 aa13.52□□□□□ -0.25
PFDN1-201ENST00000261813 PRPF38BQ5VTL8 546 aaKnown RBP13.52□□□□□ -0.25
PFDN1-201ENST00000261813 GTF3C2Q8WUA4 911 aaPredicted RBP13.52□□□□□ -0.25
PFDN1-201ENST00000261813 BTBD7Q9P203 1132 aa13.52□□□□□ -0.25
PFDN1-201ENST00000261813 MORF4L1Q9UBU8 362 aa13.52□□□□□ -0.25
PFDN1-201ENST00000261813 FEM1BQ9UK73 627 aa13.52□□□□□ -0.25
PFDN1-201ENST00000261813 PPP1R9AQ9ULJ8 1098 aa13.52□□□□□ -0.25
PFDN1-201ENST00000261813 FRMPD2Q68DX3 1309 aaPredicted RBP13.52□□□□□ -0.25
PFDN1-201ENST00000261813 MYPNQ86TC9 1320 aa13.52□□□□□ -0.25
PFDN1-201ENST00000261813 WDR19Q8NEZ3 1342 aa13.52□□□□□ -0.25
PFDN1-201ENST00000261813 TMEM232C9JQI7 657 aa13.51□□□□□ -0.25
PFDN1-201ENST00000261813 CASTP20810 708 aaKnown RBP13.51□□□□□ -0.25
PFDN1-201ENST00000261813 CTGFP29279 349 aa13.51□□□□□ -0.25
PFDN1-201ENST00000261813 ZNF543Q08ER8 600 aa13.51□□□□□ -0.25
PFDN1-201ENST00000261813 CCDC96Q2M329 555 aa13.51□□□□□ -0.25
PFDN1-201ENST00000261813 Q3C1V9 767 aa13.51□□□□□ -0.25
PFDN1-201ENST00000261813 TTBK2Q6IQ55 1244 aa13.51□□□□□ -0.25
PFDN1-201ENST00000261813 BLOC1S2Q6QNY1 142 aa13.51□□□□□ -0.25
PFDN1-201ENST00000261813 ZNF454Q8N9F8 522 aa13.51□□□□□ -0.25
PFDN1-201ENST00000261813 SLF1Q9BQI6 1058 aa13.51□□□□□ -0.25
PFDN1-201ENST00000261813 PAGR1Q9BTK6 254 aa13.51□□□□□ -0.25
PFDN1-201ENST00000261813 HOXC10Q9NYD6 342 aa13.51□□□□□ -0.25
PFDN1-201ENST00000261813 DAXXQ9UER7 740 aaPredicted RBP13.51□□□□□ -0.25
PFDN1-201ENST00000261813 ISY1Q9ULR0 285 aaKnown RBP13.51□□□□□ -0.25
PFDN1-201ENST00000261813 ADAMTS5Q9UNA0 930 aa13.51□□□□□ -0.25
PFDN1-201ENST00000261813 CYP46A1Q9Y6A2 500 aa13.51□□□□□ -0.25
PFDN1-201ENST00000261813 RPS6KB1P23443 525 aa13.5□□□□□ -0.25
PFDN1-201ENST00000261813 LIFRP42702 1097 aa13.5□□□□□ -0.25
PFDN1-201ENST00000261813 LACTBP83111 547 aaPredicted RBP13.5□□□□□ -0.25
PFDN1-201ENST00000261813 REPS2Q8NFH8 660 aa13.5□□□□□ -0.25
PFDN1-201ENST00000261813 CD99L2Q8TCZ2 262 aa13.5□□□□□ -0.25
PFDN1-201ENST00000261813 SNX21Q969T3 373 aa13.5□□□□□ -0.25
PFDN1-201ENST00000261813 KIFC2Q96AC6 838 aa13.5□□□□□ -0.25
PFDN1-201ENST00000261813 KIF2CQ99661 725 aa13.5□□□□□ -0.25
PFDN1-201ENST00000261813 ARHGAP39Q9C0H5 1083 aa13.5□□□□□ -0.25
PFDN1-201ENST00000261813 GPCPD1Q9NPB8 672 aa13.5□□□□□ -0.25
PFDN1-201ENST00000261813 HPS5Q9UPZ3 1129 aa13.5□□□□□ -0.25
PFDN1-201ENST00000261813 RABGAP1Q9Y3P9 1069 aa13.5□□□□□ -0.25
PFDN1-201ENST00000261813 ZSWIM8A7E2V4 1837 aa13.5□□□□□ -0.25
PFDN1-201ENST00000261813 VWA5AO00534 786 aa13.49□□□□□ -0.25
PFDN1-201ENST00000261813 PLA2G6O60733 806 aa13.49□□□□□ -0.25
PFDN1-201ENST00000261813 GOLGA8HP0CJ92 632 aa13.49□□□□□ -0.25
PFDN1-201ENST00000261813 SLC16A2P36021 539 aa13.49□□□□□ -0.25
PFDN1-201ENST00000261813 STAT2P52630 851 aa13.49□□□□□ -0.25
PFDN1-201ENST00000261813 ERVK-9P63128 1117 aa13.49□□□□□ -0.25
PFDN1-201ENST00000261813 ERVK-24P63145 666 aa13.49□□□□□ -0.25
PFDN1-201ENST00000261813 TROAPQ12815 778 aa13.49□□□□□ -0.25
PFDN1-201ENST00000261813 BTNL9Q6UXG8 535 aa13.49□□□□□ -0.25
PFDN1-201ENST00000261813 RUFY3Q7L099 469 aa13.49□□□□□ -0.25
PFDN1-201ENST00000261813 FAM160B2Q86V87 743 aa13.49□□□□□ -0.25
PFDN1-201ENST00000261813 ZNF654Q8IZM8 581 aa13.49□□□□□ -0.25
PFDN1-201ENST00000261813 PRPF38AQ8NAV1 312 aaKnown RBP13.49□□□□□ -0.25
PFDN1-201ENST00000261813 KCNV2Q8TDN2 545 aa13.49□□□□□ -0.25
PFDN1-201ENST00000261813 MYL10Q9BUA6 226 aa13.49□□□□□ -0.25
PFDN1-201ENST00000261813 UPF3BQ9BZI7 483 aaKnown RBP13.49□□□□□ -0.25
PFDN1-201ENST00000261813 PDE4DIPQ5VU43 2346 aa13.49□□□□□ -0.25
PFDN1-201ENST00000261813 NEK4P51957 841 aa13.48□□□□□ -0.25
PFDN1-201ENST00000261813 IKQ13123 557 aaPredicted RBP13.48□□□□□ -0.25
PFDN1-201ENST00000261813 GRM4Q14833 912 aa13.48□□□□□ -0.25
PFDN1-201ENST00000261813 TMEM132BQ14DG7 1078 aa13.48□□□□□ -0.25
PFDN1-201ENST00000261813 ANKRD1Q15327 319 aa13.48□□□□□ -0.25
PFDN1-201ENST00000261813 ASPRV1Q53RT3 343 aa13.48□□□□□ -0.25
PFDN1-201ENST00000261813 GPATCH4Q5T3I0 446 aaKnown RBP13.48□□□□□ -0.25
PFDN1-201ENST00000261813 NFXL1Q6ZNB6 911 aa13.48□□□□□ -0.25
PFDN1-201ENST00000261813 Q6ZUG5 572 aa13.48□□□□□ -0.25
PFDN1-201ENST00000261813 CATIPQ7Z7H3 387 aa13.48□□□□□ -0.25
PFDN1-201ENST00000261813 SGMS1Q86VZ5 419 aa13.48□□□□□ -0.25
PFDN1-201ENST00000261813 TMTC2Q8N394 836 aa13.48□□□□□ -0.25
PFDN1-201ENST00000261813 STAG2Q8N3U4 1231 aa13.48□□□□□ -0.25
PFDN1-201ENST00000261813 MB21D1Q8N884 522 aa13.48□□□□□ -0.25
PFDN1-201ENST00000261813 GPRC5AQ8NFJ5 357 aa13.48□□□□□ -0.25
PFDN1-201ENST00000261813 CHURC1Q8WUH1 139 aa13.48□□□□□ -0.25
PFDN1-201ENST00000261813 ERO1AQ96HE7 468 aa13.48□□□□□ -0.25
PFDN1-201ENST00000261813 AGXT2Q9BYV1 514 aa13.48□□□□□ -0.25
PFDN1-201ENST00000261813 CPVLQ9H3G5 476 aa13.48□□□□□ -0.25
PFDN1-201ENST00000261813 MAD2L2Q9UI95 211 aa13.48□□□□□ -0.25
PFDN1-201ENST00000261813 PRR12Q9ULL5 1215 aa13.48□□□□□ -0.25
PFDN1-201ENST00000261813 PALM3A6NDB9 673 aaPredicted RBP13.47□□□□□ -0.25
PFDN1-201ENST00000261813 CCDC69A6NI79 296 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms