RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 MOB2Q70IA6 237 aa20.16■□□□□ 0.82
SSB-201ENST00000260956 SH3RF1Q7Z6J0 888 aa20.16■□□□□ 0.82
SSB-201ENST00000260956 DAGLBQ8NCG7 672 aa20.16■□□□□ 0.82
SSB-201ENST00000260956 CACTINQ8WUQ7 758 aaKnown RBP20.16■□□□□ 0.82
SSB-201ENST00000260956 DDX4Q9NQI0 724 aaKnown RBP20.16■□□□□ 0.82
SSB-201ENST00000260956 MYH8P13535 1937 aa20.15■□□□□ 0.82
SSB-201ENST00000260956 PRR29P0C7W0 189 aa20.15■□□□□ 0.82
SSB-201ENST00000260956 TTC38Q5R3I4 469 aa20.15■□□□□ 0.82
SSB-201ENST00000260956 NBPF12Q5TAG4 269 aaPredicted RBP20.15■□□□□ 0.82
SSB-201ENST00000260956 CNNM3Q8NE01 707 aa20.15■□□□□ 0.82
SSB-201ENST00000260956 FERMT2Q96AC1 680 aa20.15■□□□□ 0.82
SSB-201ENST00000260956 FAM13BQ9NYF5 915 aa20.15■□□□□ 0.82
SSB-201ENST00000260956 SERTAD1Q9UHV2 236 aa20.15■□□□□ 0.82
SSB-201ENST00000260956 SSC5DA1L4H1 1573 aa20.15■□□□□ 0.82
SSB-201ENST00000260956 TMEM88BA6NKF7 163 aa20.14■□□□□ 0.81
SSB-201ENST00000260956 TSPY3P0CV98 308 aa20.14■□□□□ 0.81
SSB-201ENST00000260956 TSPY8P0CW00 308 aa20.14■□□□□ 0.81
SSB-201ENST00000260956 TCP10Q12799 353 aa20.14■□□□□ 0.81
SSB-201ENST00000260956 SLF2Q8IX21 1173 aa20.14■□□□□ 0.81
SSB-201ENST00000260956 AMOTL1Q8IY63 956 aa20.14■□□□□ 0.81
SSB-201ENST00000260956 FAM177A1Q8N128 213 aaPredicted RBP20.14■□□□□ 0.81
SSB-201ENST00000260956 MKNK2Q9HBH9 465 aa20.14■□□□□ 0.81
SSB-201ENST00000260956 BRMS1Q9HCU9 246 aa20.14■□□□□ 0.81
SSB-201ENST00000260956 MAN1B1Q9UKM7 699 aa20.14■□□□□ 0.81
SSB-201ENST00000260956 POLR2DO15514 142 aaKnown RBP20.13■□□□□ 0.81
SSB-201ENST00000260956 GNAQP50148 359 aa20.13■□□□□ 0.81
SSB-201ENST00000260956 POSTNQ15063 836 aa20.13■□□□□ 0.81
SSB-201ENST00000260956 C4orf32Q8N8J7 132 aa20.13■□□□□ 0.81
SSB-201ENST00000260956 OSBPL5Q9H0X9 879 aaPredicted RBP20.13■□□□□ 0.81
SSB-201ENST00000260956 CREBZFQ9NS37 354 aa20.13■□□□□ 0.81
SSB-201ENST00000260956 MORC3Q14149 939 aa20.13■□□□□ 0.81
SSB-201ENST00000260956 RASGRP2Q7LDG7 609 aa20.13■□□□□ 0.81
SSB-201ENST00000260956 SPZ1Q9BXG8 430 aa20.13■□□□□ 0.81
SSB-201ENST00000260956 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.13■□□□□ 0.81
SSB-201ENST00000260956 IGKV6D-41A0A0C4DH26 115 aa20.12■□□□□ 0.81
SSB-201ENST00000260956 STXBP3O00186 592 aa20.12■□□□□ 0.81
SSB-201ENST00000260956 TPM2P07951 284 aa20.12■□□□□ 0.81
SSB-201ENST00000260956 SLURP2P0DP57 97 aa20.12■□□□□ 0.81
SSB-201ENST00000260956 IL17AQ16552 155 aa20.12■□□□□ 0.81
SSB-201ENST00000260956 FKBP1CQ5VVH2 108 aa20.12■□□□□ 0.81
SSB-201ENST00000260956 WWC2Q6AWC2 1192 aa20.12■□□□□ 0.81
SSB-201ENST00000260956 SH3BP5LQ7L8J4 393 aa20.12■□□□□ 0.81
SSB-201ENST00000260956 ZNF444Q8N0Y2 327 aaPredicted RBP20.12■□□□□ 0.81
SSB-201ENST00000260956 DNAJC5GQ8N7S2 189 aa20.12■□□□□ 0.81
SSB-201ENST00000260956 IDI2Q9BXS1 227 aa20.12■□□□□ 0.81
SSB-201ENST00000260956 ATP2B1P20020 1258 aa20.11■□□□□ 0.81
SSB-201ENST00000260956 CALML3P27482 149 aa20.11■□□□□ 0.81
SSB-201ENST00000260956 MYL5Q02045 173 aa20.11■□□□□ 0.81
SSB-201ENST00000260956 ARID5BQ14865 1188 aa20.11■□□□□ 0.81
SSB-201ENST00000260956 SAPCD2Q86UD0 394 aa20.11■□□□□ 0.81
SSB-201ENST00000260956 GPKOWQ92917 476 aaPredicted RBP eCLIP20.11■□□□□ 0.817e-14■□□□□ 10.6
SSB-201ENST00000260956 MED15Q96RN5 788 aa20.11■□□□□ 0.81
SSB-201ENST00000260956 ZNF287Q9HBT7 754 aa20.11■□□□□ 0.81
SSB-201ENST00000260956 PCDHA4Q9UN74 947 aa20.11■□□□□ 0.81
SSB-201ENST00000260956 R3HCC1Q9Y3T6 440 aaKnown RBP20.11■□□□□ 0.81
SSB-201ENST00000260956 SMTNL1A8MU46 457 aa20.1■□□□□ 0.81
SSB-201ENST00000260956 NLRP5P59047 1200 aa20.1■□□□□ 0.81
SSB-201ENST00000260956 CCZ1BP86790 482 aa20.1■□□□□ 0.81
SSB-201ENST00000260956 CCZ1P86791 482 aaPredicted RBP20.1■□□□□ 0.81
SSB-201ENST00000260956 PRKG1Q13976 671 aa20.1■□□□□ 0.81
SSB-201ENST00000260956 E2F4Q16254 413 aa20.1■□□□□ 0.81
SSB-201ENST00000260956 FAM83AQ86UY5 434 aa20.1■□□□□ 0.81
SSB-201ENST00000260956 LRRC8AQ8IWT6 810 aa20.1■□□□□ 0.81
SSB-201ENST00000260956 BLIDQ8IZY5 108 aa20.1■□□□□ 0.81
SSB-201ENST00000260956 TRIML1Q8N9V2 468 aa20.1■□□□□ 0.81
SSB-201ENST00000260956 SYMPKQ92797 1274 aaKnown RBP20.1■□□□□ 0.81
SSB-201ENST00000260956 EPSTI1Q96J88 318 aa20.1■□□□□ 0.81
SSB-201ENST00000260956 LZTS2Q9BRK4 669 aa20.1■□□□□ 0.81
SSB-201ENST00000260956 XPO4Q9C0E2 1151 aaKnown RBP20.1■□□□□ 0.81
SSB-201ENST00000260956 TRPM7Q96QT4 1865 aa20.1■□□□□ 0.81
SSB-201ENST00000260956 PTGDRQ13258 359 aa20.1■□□□□ 0.81
SSB-201ENST00000260956 TNFAIP1Q13829 316 aa20.1■□□□□ 0.81
SSB-201ENST00000260956 ZRSR1Q15695 479 aaKnown RBP20.1■□□□□ 0.81
SSB-201ENST00000260956 ZNF174Q15697 407 aa20.1■□□□□ 0.81
SSB-201ENST00000260956 ISM2Q6H9L7 571 aa20.1■□□□□ 0.81
SSB-201ENST00000260956 PIK3AP1Q6ZUJ8 805 aa20.1■□□□□ 0.81
SSB-201ENST00000260956 DRC7Q8IY82 874 aa20.1■□□□□ 0.81
SSB-201ENST00000260956 GRAMD1CQ8IYS0 662 aa20.1■□□□□ 0.81
SSB-201ENST00000260956 GBA2Q9HCG7 927 aaPredicted RBP20.1■□□□□ 0.81
SSB-201ENST00000260956 BARHL2Q9NY43 387 aa20.1■□□□□ 0.81
SSB-201ENST00000260956 SLFN14P0C7P3 912 aa20.09■□□□□ 0.81
SSB-201ENST00000260956 ATP1A3P13637 1013 aa20.09■□□□□ 0.81
SSB-201ENST00000260956 SMARCA1P28370 1054 aa20.09■□□□□ 0.81
SSB-201ENST00000260956 PICALMQ13492 652 aa20.09■□□□□ 0.81
SSB-201ENST00000260956 FAM151AQ8WW52 585 aa20.09■□□□□ 0.81
SSB-201ENST00000260956 CEP95Q96GE4 821 aa20.09■□□□□ 0.81
SSB-201ENST00000260956 TMOD2Q9NZR1 351 aa20.09■□□□□ 0.81
SSB-201ENST00000260956 PPP2R3BQ9Y5P8 575 aa20.09■□□□□ 0.81
SSB-201ENST00000260956 TLL2Q9Y6L7 1015 aa20.09■□□□□ 0.81
SSB-201ENST00000260956 DDTLA6NHG4 134 aaPredicted RBP20.08■□□□□ 0.81
SSB-201ENST00000260956 NEMFO60524 1076 aa20.08■□□□□ 0.81
SSB-201ENST00000260956 TOP1P11387 765 aaKnown RBP20.08■□□□□ 0.81
SSB-201ENST00000260956 GALNT17Q6IS24 598 aa20.08■□□□□ 0.81
SSB-201ENST00000260956 KANK3Q6NY19 840 aa20.08■□□□□ 0.81
SSB-201ENST00000260956 IFNKQ9P0W0 207 aa20.08■□□□□ 0.81
SSB-201ENST00000260956 IMPACTQ9P2X3 320 aa20.08■□□□□ 0.81
SSB-201ENST00000260956 ZNF18P17022 549 aa20.07■□□□□ 0.8
SSB-201ENST00000260956 HOOK1Q9UJC3 728 aaKnown RBP20.07■□□□□ 0.8
SSB-201ENST00000260956 ABT1Q9ULW3 272 aaKnown RBP20.07■□□□□ 0.8
SSB-201ENST00000260956 SNHG28P0DPA3 235 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms