RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 ZSWIM8A7E2V4 1837 aa23.98■■□□□ 1.43
RTCA-201ENST00000260563 PLXNB2O15031 1838 aa23.98■■□□□ 1.43
RTCA-201ENST00000260563 CNMDO75829 334 aa23.98■■□□□ 1.43
RTCA-201ENST00000260563 POTEEQ6S8J3 1075 aa23.98■■□□□ 1.43
RTCA-201ENST00000260563 NBPF11Q86T75 865 aa23.98■■□□□ 1.43
RTCA-201ENST00000260563 REPS2Q8NFH8 660 aa23.98■■□□□ 1.43
RTCA-201ENST00000260563 TSKSQ9UJT2 592 aa23.98■■□□□ 1.43
RTCA-201ENST00000260563 SMCHD1A6NHR9 2005 aa23.97■■□□□ 1.43
RTCA-201ENST00000260563 PEX10O60683 326 aa23.97■■□□□ 1.43
RTCA-201ENST00000260563 SMARCA1P28370 1054 aa23.97■■□□□ 1.43
RTCA-201ENST00000260563 PLS1Q14651 629 aa23.97■■□□□ 1.43
RTCA-201ENST00000260563 TMEM132BQ14DG7 1078 aa23.97■■□□□ 1.43
RTCA-201ENST00000260563 CDC37Q16543 378 aaPredicted RBP23.97■■□□□ 1.43
RTCA-201ENST00000260563 CMTR1Q8N1G2 835 aaKnown RBP23.97■■□□□ 1.43
RTCA-201ENST00000260563 SRBD1Q8N5C6 995 aaKnown RBP23.97■■□□□ 1.43
RTCA-201ENST00000260563 GPRC5AQ8NFJ5 357 aa23.97■■□□□ 1.43
RTCA-201ENST00000260563 LLPHQ9BRT6 129 aaKnown RBP23.97■■□□□ 1.43
RTCA-201ENST00000260563 RIOX1Q9H6W3 641 aa23.97■■□□□ 1.43
RTCA-201ENST00000260563 JMJD4Q9H9V9 463 aa23.97■■□□□ 1.43
RTCA-201ENST00000260563 VAT1LQ9HCJ6 419 aa23.97■■□□□ 1.43
RTCA-201ENST00000260563 FAM217BQ9NTX9 383 aaPredicted RBP23.97■■□□□ 1.43
RTCA-201ENST00000260563 CNTNAP5Q8WYK1 1306 aa23.97■■□□□ 1.43
RTCA-201ENST00000260563 CYTH3O43739 400 aa23.96■■□□□ 1.43
RTCA-201ENST00000260563 HSPA1AP0DMV8 641 aaKnown RBP23.96■■□□□ 1.43
RTCA-201ENST00000260563 HSPA1BP0DMV9 641 aaKnown RBP23.96■■□□□ 1.43
RTCA-201ENST00000260563 ADD1P35611 737 aaKnown RBP23.96■■□□□ 1.43
RTCA-201ENST00000260563 OAZ1P54368 228 aa23.96■■□□□ 1.43
RTCA-201ENST00000260563 SNAP25P60880 206 aa23.96■■□□□ 1.43
RTCA-201ENST00000260563 CCDC174Q6PII3 467 aa23.96■■□□□ 1.43
RTCA-201ENST00000260563 SPATC1LQ9H0A9 340 aa23.96■■□□□ 1.43
RTCA-201ENST00000260563 CWC22Q9HCG8 908 aaKnown RBP23.96■■□□□ 1.43
RTCA-201ENST00000260563 ZNF214Q9UL59 606 aaPredicted RBP23.96■■□□□ 1.43
RTCA-201ENST00000260563 SMC3Q9UQE7 1217 aa23.96■■□□□ 1.43
RTCA-201ENST00000260563 GPR25O00155 361 aa23.95■■□□□ 1.43
RTCA-201ENST00000260563 CPLX1O14810 134 aa23.95■■□□□ 1.43
RTCA-201ENST00000260563 CCNA1P78396 465 aa23.95■■□□□ 1.43
RTCA-201ENST00000260563 SLC35G1Q2M3R5 365 aa23.95■■□□□ 1.43
RTCA-201ENST00000260563 HOMER1Q86YM7 354 aa23.95■■□□□ 1.43
RTCA-201ENST00000260563 CPXCR1Q8N123 301 aa23.95■■□□□ 1.43
RTCA-201ENST00000260563 CCDC82Q8N4S0 544 aa23.95■■□□□ 1.43
RTCA-201ENST00000260563 NSUN7Q8NE18 718 aaKnown RBP23.95■■□□□ 1.43
RTCA-201ENST00000260563 TEX13BQ9BXU2 312 aa23.95■■□□□ 1.43
RTCA-201ENST00000260563 RAVER2Q9HCJ3 691 aaKnown RBP23.95■■□□□ 1.43
RTCA-201ENST00000260563 ATP2A1O14983 1001 aa23.94■■□□□ 1.42
RTCA-201ENST00000260563 CTDNEP1O95476 244 aa23.94■■□□□ 1.42
RTCA-201ENST00000260563 NOM1Q5C9Z4 860 aaKnown RBP23.94■■□□□ 1.42
RTCA-201ENST00000260563 SNRNP48Q6IEG0 339 aaKnown RBP23.94■■□□□ 1.42
RTCA-201ENST00000260563 SP3Q02447 781 aa23.94■■□□□ 1.42
RTCA-201ENST00000260563 Q3C1V9 767 aa23.94■■□□□ 1.42
RTCA-201ENST00000260563 CPLX2Q6PUV4 134 aaKnown RBP23.94■■□□□ 1.42
RTCA-201ENST00000260563 SMARCC2Q8TAQ2 1214 aa23.94■■□□□ 1.42
RTCA-201ENST00000260563 MTMR8Q96EF0 704 aa23.94■■□□□ 1.42
RTCA-201ENST00000260563 RRP36Q96EU6 259 aaKnown RBP23.94■■□□□ 1.42
RTCA-201ENST00000260563 PIGSQ96S52 555 aa23.94■■□□□ 1.42
RTCA-201ENST00000260563 SEC63Q9UGP8 760 aaKnown RBP23.94■■□□□ 1.42
RTCA-201ENST00000260563 ZNF536O15090 1300 aa23.93■■□□□ 1.42
RTCA-201ENST00000260563 ZBTB5O15062 677 aa23.93■■□□□ 1.42
RTCA-201ENST00000260563 CDKL5O76039 1030 aa23.93■■□□□ 1.42
RTCA-201ENST00000260563 ICAM1P05362 532 aa23.93■■□□□ 1.42
RTCA-201ENST00000260563 GJB2P29033 226 aa23.93■■□□□ 1.42
RTCA-201ENST00000260563 STAT3P40763 770 aa23.93■■□□□ 1.42
RTCA-201ENST00000260563 QRICH1Q2TAL8 776 aa23.93■■□□□ 1.42
RTCA-201ENST00000260563 PIBF1Q8WXW3 757 aa23.93■■□□□ 1.42
RTCA-201ENST00000260563 CCPG1Q9ULG6 757 aa23.93■■□□□ 1.42
RTCA-201ENST00000260563 CASP8AP2Q9UKL3 1982 aa23.92■■□□□ 1.42
RTCA-201ENST00000260563 PTPDC1A2A3K4 754 aa23.92■■□□□ 1.42
RTCA-201ENST00000260563 FOXN1O15353 648 aa23.92■■□□□ 1.42
RTCA-201ENST00000260563 JAK2O60674 1132 aa23.92■■□□□ 1.42
RTCA-201ENST00000260563 DTNBO60941 627 aa23.92■■□□□ 1.42
RTCA-201ENST00000260563 NTRK3Q16288 839 aa23.92■■□□□ 1.42
RTCA-201ENST00000260563 RIOX2Q8IUF8 465 aa23.92■■□□□ 1.42
RTCA-201ENST00000260563 CCAR1Q8IX12 1150 aaKnown RBP23.92■■□□□ 1.42
RTCA-201ENST00000260563 MOV10L1Q9BXT6 1211 aaKnown RBP23.92■■□□□ 1.42
RTCA-201ENST00000260563 PNMA2Q9UL42 364 aa23.92■■□□□ 1.42
RTCA-201ENST00000260563 ZNFX1Q9P2E3 1918 aaKnown RBP23.92■■□□□ 1.42
RTCA-201ENST00000260563 FKTNO75072 461 aa23.91■■□□□ 1.42
RTCA-201ENST00000260563 SLC25A27O95847 323 aa23.91■■□□□ 1.42
RTCA-201ENST00000260563 IFNAR1P17181 557 aa23.91■■□□□ 1.42
RTCA-201ENST00000260563 COPB2P35606 906 aa23.91■■□□□ 1.42
RTCA-201ENST00000260563 DDIT3P35638 169 aa23.91■■□□□ 1.42
RTCA-201ENST00000260563 HMGN5P82970 282 aaKnown RBP23.91■■□□□ 1.42
RTCA-201ENST00000260563 LACTBP83111 547 aaPredicted RBP23.91■■□□□ 1.42
RTCA-201ENST00000260563 FUT2Q10981 343 aa23.91■■□□□ 1.42
RTCA-201ENST00000260563 ZNF296Q8WUU4 475 aaPredicted RBP23.91■■□□□ 1.42
RTCA-201ENST00000260563 AGBL1Q96MI9 1066 aa23.91■■□□□ 1.42
RTCA-201ENST00000260563 DOCK3Q8IZD9 2030 aa23.91■■□□□ 1.42
RTCA-201ENST00000260563 PNMA6FA0A0J9YX94 578 aa23.9■■□□□ 1.42
RTCA-201ENST00000260563 KIF22Q14807 665 aa23.9■■□□□ 1.42
RTCA-201ENST00000260563 NCAPG2Q86XI2 1143 aa23.9■■□□□ 1.42
RTCA-201ENST00000260563 FBXO11Q86XK2 927 aa23.9■■□□□ 1.42
RTCA-201ENST00000260563 SHCBP1Q8NEM2 672 aa23.9■■□□□ 1.42
RTCA-201ENST00000260563 PORCNQ9H237 461 aa23.9■■□□□ 1.42
RTCA-201ENST00000260563 ZNF236Q9UL36 1845 aa23.9■■□□□ 1.42
RTCA-201ENST00000260563 HSPA8P11142 646 aaKnown RBP23.89■■□□□ 1.42
RTCA-201ENST00000260563 CTCFP49711 727 aaPredicted RBP23.89■■□□□ 1.42
RTCA-201ENST00000260563 USH1GQ495M9 461 aa23.89■■□□□ 1.42
RTCA-201ENST00000260563 WDR78Q5VTH9 848 aa23.89■■□□□ 1.42
RTCA-201ENST00000260563 PHKBQ93100 1093 aa23.89■■□□□ 1.42
RTCA-201ENST00000260563 DDX11Q96FC9 970 aa23.89■■□□□ 1.42
RTCA-201ENST00000260563 AMNQ9BXJ7 453 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms