RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 NXNQ6DKJ4 435 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 PSMB7Q99436 277 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 ANGPTL2Q9UKU9 493 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 USTQ9Y2C2 406 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 EYA2O00167 538 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 RETREG2Q8NC44 543 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 WHAMMQ8TF30 809 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 RIOK1Q9BRS2 568 aaKnown RBP5.25□□□□□ -1.57
RC3H1-201ENST00000258349 C1orf112Q9NSG2 853 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 V9GY48 417 aaPredicted RBP5.25□□□□□ -1.57
RC3H1-201ENST00000258349 CDK12Q9NYV4 1490 aaPredicted RBP5.25□□□□□ -1.57
RC3H1-201ENST00000258349 E7EWF7 191 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 BRD1O95696 1058 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 PFKFB1P16118 471 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 EPHB4P54760 987 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 CABP7Q86V35 215 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 GPBP1Q86WP2 473 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 EFCC1Q9HA90 598 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 PCDHB13Q9Y5F0 798 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 ABCC4O15439 1325 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 GAS7O60861 476 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 HARSP12081 509 aaKnown RBP5.25□□□□□ -1.57
RC3H1-201ENST00000258349 SLC1A4P43007 532 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 ATP1A2P50993 1020 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 TMTC3Q6ZXV5 915 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 ZBTB9Q96C00 473 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 ZSCAN10Q96SZ4 725 aaPredicted RBP5.25□□□□□ -1.57
RC3H1-201ENST00000258349 FAF1Q9UNN5 650 aaPredicted RBP5.25□□□□□ -1.57
RC3H1-201ENST00000258349 GTPBP6O43824 516 aaPredicted RBP5.25□□□□□ -1.57
RC3H1-201ENST00000258349 DDAH1O94760 285 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 SRGAP2BP0DMP2 458 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 MYOCDQ8IZQ8 938 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 CNBD1Q8NA66 436 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 CCDC124Q96CT7 223 aaKnown RBP5.25□□□□□ -1.57
RC3H1-201ENST00000258349 CALR3Q96L12 384 aaKnown RBP5.25□□□□□ -1.57
RC3H1-201ENST00000258349 FAM227BQ96M60 508 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 ZC3H12CQ9C0D7 883 aaKnown RBP5.25□□□□□ -1.57
RC3H1-201ENST00000258349 PANK4Q9NVE7 773 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 RRP15Q9Y3B9 282 aaKnown RBP5.25□□□□□ -1.57
RC3H1-201ENST00000258349 NINQ8N4C6 2090 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 TTI1O43156 1089 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 SART1O43290 800 aaKnown RBP5.25□□□□□ -1.57
RC3H1-201ENST00000258349 SMIM24O75264 130 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 CMA1P23946 247 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 SLC39A6Q13433 755 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 MMEL1Q495T6 779 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 FBXO31Q5XUX0 539 aaPredicted RBP5.25□□□□□ -1.57
RC3H1-201ENST00000258349 KRT40Q6A162 431 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 U2AF1L4Q8WU68 220 aaKnown RBP5.25□□□□□ -1.57
RC3H1-201ENST00000258349 NLRP7Q8WX94 980 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 IP6K1Q92551 441 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 SCYL1Q96KG9 808 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 ARMT1Q9H993 441 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 DDX25Q9UHL0 483 aaKnown RBP5.25□□□□□ -1.57
RC3H1-201ENST00000258349 BAG5Q9UL15 447 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 RNF123Q5XPI4 1314 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 CPA1P15085 419 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 INPP1P49441 399 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 PRPSAP1Q14558 356 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 ME3Q16798 604 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 LRWD1Q9UFC0 647 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 PNMA2Q9UL42 364 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 TARBP1Q13395 1621 aaKnown RBP5.25□□□□□ -1.57
RC3H1-201ENST00000258349 LMNAP02545 664 aaKnown RBP5.25□□□□□ -1.57
RC3H1-201ENST00000258349 S100BP04271 92 aaPredicted RBP5.25□□□□□ -1.57
RC3H1-201ENST00000258349 MYL1P05976 194 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 ATF7P17544 494 aaPredicted RBP5.25□□□□□ -1.57
RC3H1-201ENST00000258349 EEF1GP26641 437 aaKnown RBP5.25□□□□□ -1.57
RC3H1-201ENST00000258349 ESRRGP62508 458 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 CUL1Q13616 776 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 PDZD8Q8NEN9 1154 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 GPT2Q8TD30 523 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.25□□□□□ -1.57
RC3H1-201ENST00000258349 JRKLQ9Y4A0 524 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 ABCA6Q8N139 1617 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 PFKFB2O60825 505 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 PFDN1O60925 122 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 BAG2O95816 211 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 GSTA1P08263 222 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 GSTA2P09210 222 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 LONP1P36776 959 aaKnown RBP5.25□□□□□ -1.57
RC3H1-201ENST00000258349 DIS3L2Q8IYB7 885 aaKnown RBP5.25□□□□□ -1.57
RC3H1-201ENST00000258349 NACA2Q9H009 215 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 AZI2Q9H6S1 392 aa5.25□□□□□ -1.57
RC3H1-201ENST00000258349 ATP5JP18859 108 aa5.24□□□□□ -1.57
RC3H1-201ENST00000258349 PIK3CAP42336 1068 aa5.24□□□□□ -1.57
RC3H1-201ENST00000258349 TXKP42681 527 aa5.24□□□□□ -1.57
RC3H1-201ENST00000258349 DESI2Q9BSY9 194 aa5.24□□□□□ -1.57
RC3H1-201ENST00000258349 AATFQ9NY61 560 aaKnown RBP eCLIP5.24□□□□□ -1.57
RC3H1-201ENST00000258349 PKD2L1Q9P0L9 805 aa5.24□□□□□ -1.57
RC3H1-201ENST00000258349 AFG3L2Q9Y4W6 797 aa5.24□□□□□ -1.57
RC3H1-201ENST00000258349 EFCAB6Q5THR3 1501 aa5.24□□□□□ -1.57
RC3H1-201ENST00000258349 WDR46O15213 610 aaKnown RBP5.24□□□□□ -1.57
RC3H1-201ENST00000258349 PDE8AO60658 829 aa5.24□□□□□ -1.57
RC3H1-201ENST00000258349 TTC4O95801 387 aa5.24□□□□□ -1.57
RC3H1-201ENST00000258349 LPIN2Q92539 896 aa5.24□□□□□ -1.57
RC3H1-201ENST00000258349 SPDL1Q96EA4 605 aa5.24□□□□□ -1.57
RC3H1-201ENST00000258349 EFHD1Q9BUP0 239 aa5.24□□□□□ -1.57
RC3H1-201ENST00000258349 HAUS4Q9H6D7 363 aa5.24□□□□□ -1.57
RC3H1-201ENST00000258349 ACTR5Q9H9F9 607 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms