RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 GOLGA6L4A6NEF3 574 aa10.84□□□□□ -0.67
NIP7-202ENST00000254941 SMCO2A6NFE2 343 aa10.84□□□□□ -0.67
NIP7-202ENST00000254941 SPTLC2O15270 562 aa10.84□□□□□ -0.67
NIP7-202ENST00000254941 PPP1R12BO60237 982 aaPredicted RBP10.84□□□□□ -0.67
NIP7-202ENST00000254941 TRAPPC10P48553 1259 aa10.84□□□□□ -0.67
NIP7-202ENST00000254941 IKQ13123 557 aaPredicted RBP10.84□□□□□ -0.67
NIP7-202ENST00000254941 ZYXQ15942 572 aaKnown RBP10.84□□□□□ -0.67
NIP7-202ENST00000254941 CDC37Q16543 378 aaPredicted RBP10.84□□□□□ -0.67
NIP7-202ENST00000254941 QRICH1Q2TAL8 776 aa10.84□□□□□ -0.67
NIP7-202ENST00000254941 CAVIN1Q6NZI2 390 aaKnown RBP10.84□□□□□ -0.67
NIP7-202ENST00000254941 DLK2Q6UY11 383 aa10.84□□□□□ -0.67
NIP7-202ENST00000254941 CHURC1Q8WUH1 139 aa10.84□□□□□ -0.67
NIP7-202ENST00000254941 COA7Q96BR5 231 aa10.84□□□□□ -0.67
NIP7-202ENST00000254941 AS3MTQ9HBK9 375 aa10.84□□□□□ -0.67
NIP7-202ENST00000254941 PRR12Q9ULL5 1215 aa10.84□□□□□ -0.67
NIP7-202ENST00000254941 FAM205CA6NFA0 338 aa10.83□□□□□ -0.68
NIP7-202ENST00000254941 WDR46O15213 610 aaKnown RBP10.83□□□□□ -0.68
NIP7-202ENST00000254941 PPP6R2O75170 966 aa10.83□□□□□ -0.68
NIP7-202ENST00000254941 ME1P48163 572 aa10.83□□□□□ -0.68
NIP7-202ENST00000254941 USP14P54578 494 aa10.83□□□□□ -0.68
NIP7-202ENST00000254941 NOM1Q5C9Z4 860 aaKnown RBP10.83□□□□□ -0.68
NIP7-202ENST00000254941 ADALQ6DHV7 355 aa10.83□□□□□ -0.68
NIP7-202ENST00000254941 PIK3AP1Q6ZUJ8 805 aa10.83□□□□□ -0.68
NIP7-202ENST00000254941 ZNF280CQ8ND82 737 aa10.83□□□□□ -0.68
NIP7-202ENST00000254941 BICD2Q8TD16 824 aa10.83□□□□□ -0.68
NIP7-202ENST00000254941 GZF1Q9H116 711 aaPredicted RBP10.83□□□□□ -0.68
NIP7-202ENST00000254941 TMEM63CQ9P1W3 806 aa10.83□□□□□ -0.68
NIP7-202ENST00000254941 NOL7Q9UMY1 257 aaKnown RBP10.83□□□□□ -0.68
NIP7-202ENST00000254941 PCDHA7Q9UN72 937 aa10.83□□□□□ -0.68
NIP7-202ENST00000254941 PCDHA6Q9UN73 950 aa10.83□□□□□ -0.68
NIP7-202ENST00000254941 PCDHA8Q9Y5H6 950 aa10.83□□□□□ -0.68
NIP7-202ENST00000254941 RLFQ13129 1914 aa10.83□□□□□ -0.68
NIP7-202ENST00000254941 BACE1P56817 501 aa10.83□□□□□ -0.68
NIP7-202ENST00000254941 SPP2Q13103 211 aa10.83□□□□□ -0.68
NIP7-202ENST00000254941 MTMR2Q13614 643 aa10.83□□□□□ -0.68
NIP7-202ENST00000254941 EAPPQ56P03 285 aaPredicted RBP10.83□□□□□ -0.68
NIP7-202ENST00000254941 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.83□□□□□ -0.68
NIP7-202ENST00000254941 FAM160B2Q86V87 743 aa10.83□□□□□ -0.68
NIP7-202ENST00000254941 JMYQ8N9B5 988 aa10.83□□□□□ -0.68
NIP7-202ENST00000254941 RASGRP4Q8TDF6 673 aa10.83□□□□□ -0.68
NIP7-202ENST00000254941 FEM1BQ9UK73 627 aa10.83□□□□□ -0.68
NIP7-202ENST00000254941 PCDHB6Q9Y5E3 794 aa10.83□□□□□ -0.68
NIP7-202ENST00000254941 PCDHA1Q9Y5I3 950 aa10.83□□□□□ -0.68
NIP7-202ENST00000254941 ZHX2Q9Y6X8 837 aa10.83□□□□□ -0.68
NIP7-202ENST00000254941 MORC2Q9Y6X9 1032 aaPredicted RBP10.83□□□□□ -0.68
NIP7-202ENST00000254941 CCDC194A0A1B0GVG4 234 aa10.82□□□□□ -0.68
NIP7-202ENST00000254941 TRIM75PA6NK02 468 aa10.82□□□□□ -0.68
NIP7-202ENST00000254941 ADCY7P51828 1080 aa10.82□□□□□ -0.68
NIP7-202ENST00000254941 MAP3K9P80192 1104 aa10.82□□□□□ -0.68
NIP7-202ENST00000254941 PRKG1Q13976 671 aa10.82□□□□□ -0.68
NIP7-202ENST00000254941 REXO1Q8N1G1 1221 aaKnown RBP10.82□□□□□ -0.68
NIP7-202ENST00000254941 SYAP1Q96A49 352 aaPredicted RBP10.82□□□□□ -0.68
NIP7-202ENST00000254941 CDCA5Q96FF9 252 aa10.82□□□□□ -0.68
NIP7-202ENST00000254941 AMNQ9BXJ7 453 aa10.82□□□□□ -0.68
NIP7-202ENST00000254941 RIC8AQ9NPQ8 531 aa10.82□□□□□ -0.68
NIP7-202ENST00000254941 EMILIN3Q9NT22 766 aa10.82□□□□□ -0.68
NIP7-202ENST00000254941 CEP131Q9UPN4 1083 aa10.82□□□□□ -0.68
NIP7-202ENST00000254941 COL11A1P12107 1806 aaPredicted RBP10.82□□□□□ -0.68
NIP7-202ENST00000254941 A0A1W2PQ27 194 aa10.81□□□□□ -0.68
NIP7-202ENST00000254941 A0A1W2PQ64 194 aa10.81□□□□□ -0.68
NIP7-202ENST00000254941 A0A1W2PQD8 194 aa10.81□□□□□ -0.68
NIP7-202ENST00000254941 C19orf81C9J6K1 198 aa10.81□□□□□ -0.68
NIP7-202ENST00000254941 BMP15O95972 392 aa10.81□□□□□ -0.68
NIP7-202ENST00000254941 NF2P35240 595 aa10.81□□□□□ -0.68
NIP7-202ENST00000254941 IREB2P48200 963 aaKnown RBP10.81□□□□□ -0.68
NIP7-202ENST00000254941 VGLL4Q14135 290 aa10.81□□□□□ -0.68
NIP7-202ENST00000254941 TPRNQ4KMQ1 711 aa10.81□□□□□ -0.68
NIP7-202ENST00000254941 AXDND1Q5T1B0 1012 aaPredicted RBP10.81□□□□□ -0.68
NIP7-202ENST00000254941 KRT25Q7Z3Z0 450 aa10.81□□□□□ -0.68
NIP7-202ENST00000254941 FBXO11Q86XK2 927 aa10.81□□□□□ -0.68
NIP7-202ENST00000254941 CUL5Q93034 780 aa10.81□□□□□ -0.68
NIP7-202ENST00000254941 GLT8D2Q9H1C3 349 aa10.81□□□□□ -0.68
NIP7-202ENST00000254941 RANBP17Q9H2T7 1088 aaKnown RBP10.81□□□□□ -0.68
NIP7-202ENST00000254941 WNT7AO00755 349 aa10.81□□□□□ -0.68
NIP7-202ENST00000254941 LIG1P18858 919 aa10.81□□□□□ -0.68
NIP7-202ENST00000254941 VCAM1P19320 739 aa10.81□□□□□ -0.68
NIP7-202ENST00000254941 ATP2B1P20020 1258 aa10.81□□□□□ -0.68
NIP7-202ENST00000254941 MARCKSP29966 332 aaPredicted RBP10.81□□□□□ -0.68
NIP7-202ENST00000254941 CLK2P49760 499 aaKnown RBP10.81□□□□□ -0.68
NIP7-202ENST00000254941 MRPL12P52815 198 aaKnown RBP10.81□□□□□ -0.68
NIP7-202ENST00000254941 SNAP25P60880 206 aa10.81□□□□□ -0.68
NIP7-202ENST00000254941 TRAF1Q13077 416 aa10.81□□□□□ -0.68
NIP7-202ENST00000254941 GSE1Q14687 1217 aa10.81□□□□□ -0.68
NIP7-202ENST00000254941 MAP3K11Q16584 847 aa10.81□□□□□ -0.68
NIP7-202ENST00000254941 ZSCAN23Q3MJ62 389 aa10.81□□□□□ -0.68
NIP7-202ENST00000254941 TTC38Q5R3I4 469 aa10.81□□□□□ -0.68
NIP7-202ENST00000254941 PRPF38AQ8NAV1 312 aaKnown RBP10.81□□□□□ -0.68
NIP7-202ENST00000254941 KIFC2Q96AC6 838 aa10.81□□□□□ -0.68
NIP7-202ENST00000254941 C12orf42Q96LP6 360 aa10.81□□□□□ -0.68
NIP7-202ENST00000254941 PSTPIP2Q9H939 334 aa10.81□□□□□ -0.68
NIP7-202ENST00000254941 FBXO28Q9NVF7 368 aa10.81□□□□□ -0.68
NIP7-202ENST00000254941 AFG3L2Q9Y4W6 797 aa10.81□□□□□ -0.68
NIP7-202ENST00000254941 CSADQ9Y600 493 aa10.81□□□□□ -0.68
NIP7-202ENST00000254941 SNCAIPQ9Y6H5 919 aa10.81□□□□□ -0.68
NIP7-202ENST00000254941 DGKZQ13574 1117 aa10.8□□□□□ -0.68
NIP7-202ENST00000254941 NONOQ15233 471 aaKnown RBP eCLIP10.8□□□□□ -0.68
NIP7-202ENST00000254941 CCAR1Q8IX12 1150 aaKnown RBP10.8□□□□□ -0.68
NIP7-202ENST00000254941 RBM46Q8TBY0 533 aaKnown RBP10.8□□□□□ -0.68
NIP7-202ENST00000254941 BIN2Q9UBW5 565 aaPredicted RBP10.8□□□□□ -0.68
NIP7-202ENST00000254941 NR1I2O75469 434 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms